Drr1 (developmentally regulated repeat element-containing transcript 1) - Rat Genome Database

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Pathways
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Gene: Drr1 (developmentally regulated repeat element-containing transcript 1) Mus musculus
Analyze
Symbol: Drr1
Name: developmentally regulated repeat element-containing transcript 1
RGD ID: 15555897
Description: INTERACTS WITH benzo[a]pyrene; D-mannitol; paracetamol
Type: lncrna
Latest Assembly: GRCm39 Ensembl - Mouse Genome Assembly GRCm39 Ensembl
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 EnsemblX15,788,543 - 15,805,488 (-)EnsemblGRCm39 Ensembl
GRCm38.p6 EnsemblX15,922,304 - 15,939,249 (-)EnsemblGRCm38mm10GRCm38
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:120
Count of miRNA genes:72
Interacting mature miRNAs:73
Transcripts:ENSMUST00000133333, ENSMUST00000151575
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSMUST00000133333
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX15,788,543 - 15,805,488 (-)Ensembl
GRCm38.p6 EnsemblX15,922,304 - 15,939,249 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151575
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX15,788,543 - 15,799,583 (-)Ensembl
GRCm38.p6 EnsemblX15,922,304 - 15,933,344 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000086048 Ensembl
PhenoGen Drr1 PhenoGen