Gm15460 (predicted gene 15460) - Rat Genome Database

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Gene: Gm15460 (predicted gene 15460) Mus musculus
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Symbol: Gm15460
Name: predicted gene 15460
RGD ID: 15554960
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: LOC112841584; protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) pseudogene
Related Functional Gene: Pin4  
Latest Assembly: GRCm39 Ensembl - Mouse Genome Assembly GRCm39 Ensembl
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393137,610,734 - 137,611,187 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3137,610,770 - 137,611,160 (+)EnsemblGRCm39 Ensembl
GRCm383137,904,973 - 137,905,426 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3137,905,009 - 137,905,399 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map3G3NCBI
cM Map363.96NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm15460
21 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:60
Count of miRNA genes:59
Interacting mature miRNAs:60
Transcripts:ENSMUST00000118147
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_061316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC146607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000118147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3137,610,770 - 137,611,160 (+)Ensembl
GRCm38.p6 Ensembl3137,905,009 - 137,905,399 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000081829 Ensembl, ENTREZGENE
MGD MGI:3707338 ENTREZGENE
NCBI Gene LOC112841584 ENTREZGENE
PhenoGen Gm15460 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-02 Gm15460  predicted gene 15460  LOC112841584  protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-30 LOC112841584  protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) pseudogene  Gm15460  predicted gene 15460  Symbol and/or name change 5135510 APPROVED
2020-06-25 Gm15460  predicted gene 15460  LOC112841584  protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-19 LOC112841584  protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) pseudogene  Gm15460  predicted gene 15460  Symbol and/or name change 5135510 APPROVED