Slc17a8 (solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Slc17a8 (solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8) Mus musculus
Analyze
Symbol: Slc17a8
Name: solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
RGD ID: 1553740
MGI Page MGI
Description: Enables L-glutamate uniporter activity. Involved in L-glutamate transmembrane transport; positive regulation of glutamate uptake involved in transmission of nerve impulse; and regulation of acetylcholine uptake. Located in synaptic vesicle membrane. Is active in glutamatergic synapse. Is expressed in brain; cochlear ganglion; and sensory organ. Used to study autosomal dominant nonsyndromic deafness 25. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 25. Orthologous to human SLC17A8 (solute carrier family 17 member 8).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC042593; solute carrier family 17 member 8; vesicular glutamate transporter 3; vesicular glutamate transporter-3; Vglu; Vglut3; Vgt3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391089,409,882 - 89,457,111 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1089,409,882 - 89,457,115 (-)EnsemblGRCm39 Ensembl
GRCm381089,574,020 - 89,621,249 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1089,574,020 - 89,621,253 (-)EnsemblGRCm38mm10GRCm38
MGSCv371089,036,765 - 89,083,994 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361089,003,819 - 89,051,048 (-)NCBIMGSCv36mm8
Celera1091,564,557 - 91,621,586 (-)NCBICelera
Cytogenetic Map10C2NCBI
cM Map1044.99NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Up-regulation in expression of vesicular glutamate transporter 3 in substantia nigra but not in striatum of 6-hydroxydopamine-lesioned rats. Chung EK, etal., Neurosignals. 2006-2007;15(5):238-48. Epub 2007 Apr 13.
2. Glutamate co-transmission from developing medial nucleus of the trapezoid body--lateral superior olive synapses is cochlear dependent in kanamycin-treated rats. Lee JH, etal., Biochem Biophys Res Commun. 2011 Feb 11;405(2):162-7. doi: 10.1016/j.bbrc.2010.12.129. Epub 2011 Jan 5.
3. Age and meloxicam modify the response of the glutamate vesicular transporters (VGLUTs) after transient global cerebral ischemia in the rat brain. Llorente IL, etal., Brain Res Bull. 2013 May;94:90-7. doi: 10.1016/j.brainresbull.2013.02.006. Epub 2013 Feb 28.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. The auditory hair cell ribbon synapse: from assembly to function. Safieddine S, etal., Annu Rev Neurosci. 2012;35:509-28. doi: 10.1146/annurev-neuro-061010-113705.
11. Differential effects of natural rewards and pain on vesicular glutamate transporter expression in the nucleus accumbens. Tukey DS, etal., Mol Brain. 2013 Jul 9;6:32. doi: 10.1186/1756-6606-6-32.
12. Vesicular glutamate transporter-3 contributes to visceral hyperalgesia induced by Trichinella spiralis infection in rats. Yang CQ, etal., Dig Dis Sci. 2012 Apr;57(4):865-72. doi: 10.1007/s10620-011-1970-x. Epub 2011 Dec 9.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12384506   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:18080752   PMID:18215623   PMID:18278042  
PMID:18674745   PMID:19409268   PMID:19915548   PMID:20080794   PMID:20081852   PMID:20147547   PMID:20818386   PMID:21177991   PMID:21267068   PMID:21311743   PMID:21677750   PMID:21835343  
PMID:21853059   PMID:21864449   PMID:21873635   PMID:22222602   PMID:22407321   PMID:22703890   PMID:22841313   PMID:22890712   PMID:23238719   PMID:23325226   PMID:23467360   PMID:23633129  
PMID:23652001   PMID:24154525   PMID:24316076   PMID:24656254   PMID:24952961   PMID:24966377   PMID:25126785   PMID:25186747   PMID:25392491   PMID:25411503   PMID:25450145   PMID:25456497  
PMID:25505386   PMID:25639244   PMID:25782435   PMID:25834056   PMID:25988808   PMID:25995483   PMID:26239290   PMID:26287463   PMID:26291162   PMID:26558771   PMID:26711621   PMID:27160915  
PMID:27458190   PMID:27789623   PMID:28387937   PMID:28436981   PMID:28514655   PMID:28559797   PMID:28753423   PMID:28925503   PMID:28957668   PMID:29258872   PMID:29310485   PMID:29321651  
PMID:29611808   PMID:29706463   PMID:29864146   PMID:29988128   PMID:30007418   PMID:30077356   PMID:30078709   PMID:30078710   PMID:30108254   PMID:30122375   PMID:30275816   PMID:30305733  
PMID:30324647   PMID:30382198   PMID:30538199   PMID:30556914   PMID:30926748   PMID:31043739   PMID:31152445   PMID:31609468   PMID:31622610   PMID:31666704   PMID:31780530   PMID:31913118  
PMID:31914619   PMID:32053107   PMID:32076265   PMID:32306148   PMID:32386544   PMID:32568072   PMID:32895292   PMID:33046550   PMID:33164988   PMID:33186530   PMID:33208470   PMID:33355091  
PMID:33547164   PMID:33789083   PMID:34004146   PMID:34038712   PMID:34043943   PMID:34241625   PMID:34244441   PMID:34387544   PMID:35032355   PMID:35443989   PMID:35508658   PMID:35793636  
PMID:35798979   PMID:35913117   PMID:35925886   PMID:36494345   PMID:36564387   PMID:36584681   PMID:36687561   PMID:36720646   PMID:36763499   PMID:36774552   PMID:37055181   PMID:37171961  
PMID:37298722   PMID:37379370   PMID:37603775   PMID:37612305   PMID:37745283   PMID:38093006   PMID:38278147   PMID:38355793   PMID:38452762   PMID:38580652  


Genomics

Comparative Map Data
Slc17a8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391089,409,882 - 89,457,111 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1089,409,882 - 89,457,115 (-)EnsemblGRCm39 Ensembl
GRCm381089,574,020 - 89,621,249 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1089,574,020 - 89,621,253 (-)EnsemblGRCm38mm10GRCm38
MGSCv371089,036,765 - 89,083,994 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361089,003,819 - 89,051,048 (-)NCBIMGSCv36mm8
Celera1091,564,557 - 91,621,586 (-)NCBICelera
Cytogenetic Map10C2NCBI
cM Map1044.99NCBI
SLC17A8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812100,357,074 - 100,422,055 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12100,357,074 - 100,422,055 (+)EnsemblGRCh38hg38GRCh38
GRCh3712100,750,852 - 100,815,833 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361299,275,125 - 99,339,968 (+)NCBINCBI36Build 36hg18NCBI36
Build 341299,253,461 - 99,318,305NCBI
Celera12100,416,121 - 100,481,106 (+)NCBICelera
Cytogenetic Map12q23.1NCBI
HuRef1297,811,908 - 97,876,895 (+)NCBIHuRef
CHM1_112100,716,885 - 100,781,879 (+)NCBICHM1_1
T2T-CHM13v2.012100,318,500 - 100,383,494 (+)NCBIT2T-CHM13v2.0
Slc17a8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8725,881,557 - 25,936,837 (-)NCBIGRCr8
mRatBN7.2723,994,212 - 24,049,498 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl723,994,217 - 24,048,079 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx725,988,747 - 26,042,586 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0728,151,175 - 28,205,018 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0727,928,480 - 27,982,327 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0730,215,231 - 30,274,993 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl730,216,104 - 30,274,984 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0730,314,804 - 30,371,888 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4726,361,488 - 26,413,820 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1726,381,758 - 26,434,091 (-)NCBI
Celera721,139,735 - 21,191,778 (-)NCBICelera
Cytogenetic Map7q13NCBI
Slc17a8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540536,063,688 - 36,115,312 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540536,063,688 - 36,115,312 (+)NCBIChiLan1.0ChiLan1.0
SLC17A8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210108,418,745 - 108,485,542 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112108,415,176 - 108,481,943 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01297,935,177 - 98,001,240 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112101,342,113 - 101,405,844 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12101,342,113 - 101,405,844 (+)Ensemblpanpan1.1panPan2
SLC17A8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11539,443,790 - 39,489,988 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1539,443,518 - 39,486,595 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1539,811,154 - 39,867,358 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01540,095,889 - 40,152,069 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1540,106,972 - 40,150,689 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11539,364,747 - 39,409,505 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01539,459,835 - 39,516,030 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01539,733,977 - 39,790,150 (+)NCBIUU_Cfam_GSD_1.0
Slc17a8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494520,425,587 - 20,475,772 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649213,435,848 - 13,486,169 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649213,436,136 - 13,486,173 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC17A8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl583,741,715 - 83,800,808 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1583,741,641 - 83,809,472 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2587,686,292 - 87,696,625 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC17A8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11195,673,205 - 95,740,037 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1195,674,195 - 95,739,040 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037149,304,943 - 149,371,896 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc17a8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247507,345,557 - 7,396,154 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247507,345,411 - 7,396,445 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc17a8
1566 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:867
Count of miRNA genes:459
Interacting mature miRNAs:568
Transcripts:ENSMUST00000020102, ENSMUST00000105295
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1063935779115935905Mouse
1302060El3_mepilepsy 3 (mouse)Not determined106549093899491121Mouse
1300533Aem3_manti-erythrocyte autoantibody modifier 3 (mouse)Not determined106549093899491121Mouse
1301737Insq9_minsulin QTL 9 (mouse)Not determined106549093899491121Mouse
1302035Lmb4_mlupus in MRL and B6 F2 cross (mouse)Not determined106684818792258673Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067335830111735905Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1067835830124835905Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
11039497Ltpr5a_mLeishmania tropica response 5a (mouse)1073506901107507047Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1073987216125515907Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1073987216125515907Mouse
1357632Vtbt9_mvertebral trabecular bone trait 9 (mouse)Not determined1075338568109338767Mouse
4142137Femwf3_mfemur work to failure 3 (mouse)Not determined75338568109338767Mouse
1300975Fembrs3_mfemur breaking strength 3 (mouse)Not determined1075338568109338767Mouse
11251717Siim1_mstress induced immobility 1 (mouse)1078381268112381268Mouse
14747004Mancz8_mmandible centroid size 8 (mouse)1082078412116078412Mouse
11059554Lmr32e_mleishmaniasis resistance 32e (mouse)1082309418116309657Mouse
11059555Lmr32f_mleishmaniasis resistance 32f (mouse)1082309418116309657Mouse
11059550Lmr32a_mleishmaniasis resistance 32a (mouse)1082309418116309657Mouse
11059551Lmr32b_mleishmaniasis resistance 32b (mouse)1082309418116309657Mouse
11059553Lmr32d_mleishmaniasis resistance 32d (mouse)1082309418116309657Mouse
1301165Lith7_mlithogenic gene 7 (mouse)Not determined1082309418116309657Mouse
10043881Adip24_madiposity 24 (mouse)Not determined1082392803116392952Mouse
4141382Ssrq4_mstress response QTL 4 (mouse)Not determined8249093890856102Mouse
12910789Pwgrq19_mpost-weaning growth rate QTL 19 (mouse)108282870092169056Mouse
4141054mwfh_mmodifier of white forlock hypopigmentation (mouse)Not determined83017003117017136Mouse
1357594Estoq3_membryo survival total QTL 3 (mouse)Not determined1084079650122041528Mouse
1357622Espq3_membryo survival preimplantation QTL 3 (mouse)Not determined1084079650122041528Mouse
4141479W10q8_mweight 10 weeks QTL 8 (mouse)Not determined84079650122041528Mouse
4142496W6q8_mweight 6 weeks QTL 8 (mouse)Not determined84079650122041528Mouse
4141387Lgaq5_mlate growth adjusted QTL 5 (mouse)Not determined84079650122041528Mouse
4142365Egq9_mearly growth QTL 9 (mouse)Not determined84079650122041528Mouse
1357779Tesq3_mtestis weight QTL 3 (mouse)Not determined1084079650122041528Mouse
1357638Cia29_mcollagen induced arthritis 29 (mouse)Not determined1085454982118497353Mouse
1300797Sluc22_msusceptibility to lung cancer 22 (mouse)Not determined1086713608120713756Mouse
1300908Insq4_minsulin QTL 4 (mouse)Not determined1086909085120909229Mouse
1301520Uvbi1_mUVB induced immunosuppression 1 (mouse)Not determined1086909085120909229Mouse
13524528Bodwtq9_mbody wweight QTL 9 (mouse)108764311793193117Mouse
1357831Igf1sl2_mIGF-1 serum levels 2 (mouse)Not determined108769412799936278Mouse
1300921Skl4_mskeletal size (tail length) 4 (mouse)Not determined1088088254122088391Mouse
4142386Tgq20_mtriglyceride QTL 20 (mouse)Not determined88836456122836456Mouse

Markers in Region
Slc17a8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10C2UniSTS
cM Map1044.99UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000020102   ⟹   ENSMUSP00000020102
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1089,409,882 - 89,457,115 (-)Ensembl
GRCm38.p6 Ensembl1089,574,020 - 89,621,253 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105295   ⟹   ENSMUSP00000100932
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1089,411,873 - 89,435,677 (-)Ensembl
GRCm38.p6 Ensembl1089,576,011 - 89,599,815 (-)Ensembl
RefSeq Acc Id: NM_001310710   ⟹   NP_001297639
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391089,409,882 - 89,435,677 (-)NCBI
GRCm381089,574,020 - 89,599,815 (-)NCBI
Sequence:
RefSeq Acc Id: NM_182959   ⟹   NP_892004
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391089,409,882 - 89,457,111 (-)NCBI
GRCm381089,574,020 - 89,621,249 (-)ENTREZGENE
MGSCv371089,036,765 - 89,083,994 (-)RGD
Celera1091,564,557 - 91,621,586 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_892004   ⟸   NM_182959
- Peptide Label: isoform 1
- UniProtKB: Q8BFU8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001297639   ⟸   NM_001310710
- Peptide Label: isoform 2
- UniProtKB: D3YTT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000100932   ⟸   ENSMUST00000105295
RefSeq Acc Id: ENSMUSP00000020102   ⟸   ENSMUST00000020102
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BFU8-F1-model_v2 AlphaFold Q8BFU8 1-601 view protein structure

Promoters
RGD ID:6819922
Promoter ID:MM_KWN:5307
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour
Transcripts:UC007GSJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361089,062,226 - 89,062,726 (-)MPROMDB
RGD ID:8673014
Promoter ID:EPDNEW_M14537
Type:initiation region
Name:Slc17a8_1
Description:Mus musculus solute carrier family 17 (sodium-dependent inorganicphosphate cotransporter), member 8 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381089,621,228 - 89,621,288EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3039629 AgrOrtholog
Ensembl Genes ENSMUSG00000019935 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020102 ENTREZGENE
  ENSMUST00000020102.14 UniProtKB/Swiss-Prot
  ENSMUST00000105295 ENTREZGENE
  ENSMUST00000105295.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:216227 UniProtKB/Swiss-Prot
MGD MGI:3039629 ENTREZGENE
NCBI Gene 216227 ENTREZGENE
PANTHER SOLUTE CARRIER FAMILY 17 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VESICULAR GLUTAMATE TRANSPORTER 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc17a8 PhenoGen
PROSITE MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YTT3 ENTREZGENE, UniProtKB/TrEMBL
  Q3UE85_MOUSE UniProtKB/TrEMBL
  Q8BFU8 ENTREZGENE, UniProtKB/Swiss-Prot