Pdia6 (protein disulfide isomerase associated 6) - Rat Genome Database

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Gene: Pdia6 (protein disulfide isomerase associated 6) Mus musculus
Analyze
Symbol: Pdia6
Name: protein disulfide isomerase associated 6
RGD ID: 1553668
MGI Page MGI
Description: Enables protein-disulfide reductase activity. Involved in negative regulation of IRE1-mediated unfolded protein response. Part of endoplasmic reticulum chaperone complex. Is expressed in embryo; liver; lung epithelium; and pancreas epithelium. Orthologous to human PDIA6 (protein disulfide isomerase family A member 6); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; INTERACTS WITH (S)-nicotine; 1,2-dimethylhydrazine; 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1700015E05Rik; AL023058; C77895; CaB; CaBP5; P; P5; protein disulfide isomerase-related protein; protein disulfide-isomerase A6; thioredoxin domain containing 7; thioredoxin domain-containing protein 7; Txndc; Txndc7
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm6655  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391217,316,590 - 17,334,786 (+)NCBIGRCm39mm39
GRCm39 Ensembl1217,316,546 - 17,334,771 (+)Ensembl
GRCm381217,266,589 - 17,284,785 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1217,266,545 - 17,284,770 (+)EnsemblGRCm38mm10GRCm38
MGSCv371217,273,401 - 17,291,576 (+)NCBIGRCm37mm9NCBIm37
MGSCv361217,292,075 - 17,310,250 (+)NCBImm8
Celera1221,149,080 - 21,150,652 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (EXP)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
1H-pyrazole  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP)
2-methylcholine  (ISO)
3-chloropropane-1,2-diol  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin B2  (ISO)
aldehydo-D-glucosamine  (EXP)
aldehydo-D-glucose  (EXP)
amiodarone  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
antimycin A  (ISO)
aristolochic acid  (ISO)
Aroclor 1254  (EXP,ISO)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
atrazine  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-D-glucosamine  (EXP)
bisphenol A  (ISO)
bromobenzene  (ISO)
buspirone  (ISO)
cadmium dichloride  (ISO)
caffeine  (EXP)
carbon nanotube  (EXP,ISO)
carboplatin  (ISO)
chlordecone  (EXP)
choline  (EXP)
chromium(6+)  (EXP)
ciguatoxin CTX1B  (EXP)
clobetasol  (EXP)
clofibrate  (EXP,ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (EXP)
dibutyl phthalate  (ISO)
dichloroacetic acid  (EXP)
diclofenac  (EXP)
diuron  (ISO)
dopamine  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fenoldopam  (ISO)
fenpyroximate  (ISO)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
glucose  (EXP)
graphite  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
isoprenaline  (EXP)
ivermectin  (ISO)
ketamine  (ISO)
L-ethionine  (ISO)
L-methionine  (EXP)
methyl methanesulfonate  (ISO)
miconazole  (ISO)
N-nitrosomorpholine  (ISO)
nickel subsulfide  (ISO)
nicotine  (EXP)
omeprazole  (ISO)
oxidopamine  (ISO)
p-menthan-3-ol  (ISO)
paracetamol  (EXP)
perfluorododecanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
picoxystrobin  (ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (EXP)
propiconazole  (EXP)
pyrimidifen  (ISO)
rotenone  (ISO)
silicon dioxide  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (EXP,ISO)
sodium fluoride  (EXP)
tacrolimus hydrate  (EXP)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tributylstannane  (ISO)
trichloroethene  (EXP)
triphenylstannane  (ISO)
tunicamycin  (EXP,ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal circulating cytokine level  (IAGP)
abnormal T cell physiology  (IAGP)
decreased B cell number  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased CD4-positive NK T cell number  (IEA)
decreased circulating insulin level  (IAGP)
decreased circulating insulin-like growth factor I level  (IAGP)
decreased circulating triglyceride level  (IAGP)
decreased common lymphocyte progenitor cell number  (IAGP)
decreased common myeloid progenitor cell number  (IAGP)
decreased double-negative T cell number  (IAGP)
decreased double-positive T cell number  (IAGP)
decreased follicular B cell number  (IAGP)
decreased hematopoietic stem cell number  (IAGP)
decreased leukocyte cell number  (IAGP)
decreased lymphocyte cell number  (IAGP)
decreased memory-marker CD4-positive NK T cell number  (IEA)
decreased monocyte cell number  (IAGP)
decreased NK T cell number  (IAGP)
decreased pre-B cell number  (IAGP)
decreased transitional stage B cell number  (IAGP)
enlarged lymph nodes  (IEA)
enlarged thyroid gland  (IEA)
immune system phenotype  (IEA)
increased fasting circulating glucose level  (IAGP)
increased granulocyte monocyte progenitor cell number  (IAGP)
increased leukocyte cell number  (IEA)
increased marginal zone B cell number  (IAGP)
increased marginal zone precursor B cell number  (IAGP)
increased mature B cell number  (IAGP)
increased memory-marker CD4-positive NK T cell number  (IEA)
insulin resistance  (IAGP)
preweaning lethality, complete penetrance  (IAGP)
spleen hypoplasia  (IAGP)
thrombocytopenia  (IAGP)
thymus hypoplasia  (IAGP)
References

Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12475965   PMID:12477932   PMID:12617806   PMID:12904583   PMID:14610273   PMID:15489334  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16847323   PMID:18554416   PMID:18799693   PMID:19136429   PMID:22492663   PMID:22609432   PMID:22673621   PMID:24457600   PMID:24508390  
PMID:24917591   PMID:25332179   PMID:25737280   PMID:26370502   PMID:26947243   PMID:27626380   PMID:28378742   PMID:30550785   PMID:30595499   PMID:30713523   PMID:31162944   PMID:31985756  
PMID:32325033  


Genomics

Comparative Map Data
Pdia6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391217,316,590 - 17,334,786 (+)NCBIGRCm39mm39
GRCm39 Ensembl1217,316,546 - 17,334,771 (+)Ensembl
GRCm381217,266,589 - 17,284,785 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1217,266,545 - 17,284,770 (+)EnsemblGRCm38mm10GRCm38
MGSCv371217,273,401 - 17,291,576 (+)NCBIGRCm37mm9NCBIm37
MGSCv361217,292,075 - 17,310,250 (+)NCBImm8
Celera1221,149,080 - 21,150,652 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
PDIA6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl210,783,391 - 10,837,977 (-)EnsemblGRCh38hg38GRCh38
GRCh38210,783,391 - 10,837,712 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37210,923,517 - 10,977,838 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36210,840,968 - 10,870,411 (-)NCBINCBI36hg18NCBI36
Build 34210,874,116 - 10,903,558NCBI
Celera210,838,663 - 10,868,105 (-)NCBI
Cytogenetic Map2p25.1NCBI
HuRef210,774,831 - 10,804,279 (-)NCBIHuRef
CHM1_1210,853,257 - 10,882,823 (-)NCBICHM1_1
Pdia6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2640,062,980 - 40,080,223 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl640,062,926 - 40,080,613 (+)Ensembl
Rnor_6.0642,568,269 - 42,585,654 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl642,568,220 - 42,585,652 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0652,289,504 - 52,306,889 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera639,364,155 - 39,381,355 (+)NCBICelera
Cytogenetic Map6q16NCBI
Pdia6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554875,735,698 - 5,748,015 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554875,735,698 - 5,744,601 (-)NCBIChiLan1.0ChiLan1.0
PDIA6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A10,934,756 - 10,961,880 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A10,934,756 - 10,986,200 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A10,781,671 - 10,809,235 (-)NCBIMhudiblu_PPA_v0panPan3
PDIA6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1177,653,834 - 7,674,136 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl177,654,175 - 7,685,999 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha177,578,609 - 7,599,511 (-)NCBI
ROS_Cfam_1.0177,755,030 - 7,775,737 (-)NCBI
UMICH_Zoey_3.1177,641,284 - 7,661,933 (-)NCBI
UNSW_CanFamBas_1.0177,643,791 - 7,664,483 (-)NCBI
UU_Cfam_GSD_1.0177,657,505 - 7,678,201 (-)NCBI
Pdia6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629252,110,948 - 52,135,226 (-)NCBI
SpeTri2.0NW_0049365326,865,994 - 6,887,396 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PDIA6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3125,751,970 - 125,776,955 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13125,752,079 - 125,774,225 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23134,582,105 - 134,604,259 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PDIA6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11496,801,327 - 96,828,325 (+)NCBI
ChlSab1.1 Ensembl1496,801,349 - 96,828,716 (+)Ensembl
Vero_WHO_p1.0NW_02366604515,463,373 - 15,490,168 (-)NCBI
Pdia6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248654,695,178 - 4,711,029 (+)NCBI

Position Markers
RH127987  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381217,283,956 - 17,284,144UniSTSGRCm38
MGSCv371217,290,762 - 17,290,950UniSTSGRCm37
Celera1221,149,838 - 21,150,026UniSTS
Cytogenetic Map12A1.1UniSTS
RH125410  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381217,278,913 - 17,279,649UniSTSGRCm38
MGSCv371217,285,719 - 17,286,455UniSTSGRCm37
Celera1217,600,789 - 17,601,530UniSTS
Cytogenetic Map12A1.1UniSTS
Pdia6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12A1.1UniSTS
cM Map12 UniSTS
RH126263  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381217,284,056 - 17,284,305UniSTSGRCm38
MGSCv371217,290,862 - 17,291,111UniSTSGRCm37
Celera1221,149,938 - 21,150,187UniSTS
Cytogenetic Map12A1.1UniSTS
Whitehead/MRC_RH12184.07UniSTS
D12Mit291  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381217,290,133 - 17,290,301UniSTSGRCm38
MGSCv371217,296,939 - 17,297,107UniSTSGRCm37
Celera1217,612,016 - 17,612,192UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map12A1.1UniSTS
cM Map121.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122368579Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122368579Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122368579Mouse
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122368579Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124612697Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124612697Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127870733Mouse
4141112Tglq2a_mtriglyceride QTL 2a (mouse)Not determined12127870733Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127870733Mouse
9850128Tglq5_mtriglyceride QTL 5 (mouse)Not determined12127870733Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130383077Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132708755Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133380338Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1229013334290301Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12360000029700000Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12536844076984429Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12767315941673302Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12800000040000000Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12830244542302582Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12944100543441113Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12950000084100000Mouse
14746972Manh72_mmandible shape 72 (mouse)121056528244565282Mouse
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121057064344570810Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121161000097210000Mouse
4141516slwr_mslowlearner (mouse)Not determined1234247646342615Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121509733249097332Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121529102578993590Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121610000047700000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:807
Count of miRNA genes:518
Interacting mature miRNAs:618
Transcripts:ENSMUST00000057288, ENSMUST00000159434, ENSMUST00000161853, ENSMUST00000162936, ENSMUST00000163000
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_027959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC159815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000057288   ⟹   ENSMUSP00000052912
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1217,316,546 - 17,334,771 (+)Ensembl
GRCm38.p6 Ensembl1217,266,545 - 17,284,770 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159434
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1217,323,843 - 17,327,648 (+)Ensembl
GRCm38.p6 Ensembl1217,273,842 - 17,277,647 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161853
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1217,316,609 - 17,324,195 (+)Ensembl
GRCm38.p6 Ensembl1217,266,608 - 17,274,194 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162936
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1217,316,546 - 17,331,811 (+)Ensembl
GRCm38.p6 Ensembl1217,266,545 - 17,281,810 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1217,327,242 - 17,328,941 (+)Ensembl
GRCm38.p6 Ensembl1217,277,241 - 17,278,940 (+)Ensembl
RefSeq Acc Id: ENSMUST00000239402   ⟹   ENSMUSP00000159304
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1217,316,596 - 17,334,771 (+)Ensembl
GRCm38.p6 Ensembl1217,266,595 - 17,284,770 (+)Ensembl
RefSeq Acc Id: NM_027959   ⟹   NP_082235
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391217,316,590 - 17,334,786 (+)NCBI
GRCm381217,266,589 - 17,284,785 (+)NCBI
MGSCv371217,273,401 - 17,291,576 (+)RGD
Celera1217,588,492 - 17,606,681 (+)NCBI
cM Map12 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_082235   ⟸   NM_027959
- Peptide Label: precursor
- Sequence:
RefSeq Acc Id: ENSMUSP00000159304   ⟸   ENSMUST00000239402
RefSeq Acc Id: ENSMUSP00000052912   ⟸   ENSMUST00000057288
Protein Domains
Thioredoxin

Promoters
RGD ID:8677966
Promoter ID:EPDNEW_M17014
Type:initiation region
Name:Pdia6_1
Description:Mus musculus protein disulfide isomerase associated 6 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381217,266,589 - 17,266,649EPDNEW
RGD ID:6823256
Promoter ID:MM_KWN:11228
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000058331,   OTTMUST00000058332,   OTTMUST00000058424
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361217,273,069 - 17,273,569 (+)MPROMDB
RGD ID:6823257
Promoter ID:MM_KWN:11229
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   ES_Cell
Transcripts:OTTMUST00000058333
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361217,280,216 - 17,280,716 (+)MPROMDB
RGD ID:6823259
Promoter ID:MM_KWN:11230
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour
Transcripts:OTTMUST00000058423
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361217,283,756 - 17,284,256 (+)MPROMDB
RGD ID:6846997
Promoter ID:MM_ACW:9977
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:PDIA6.DSEP07,   PDIA6.FSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361217,290,726 - 17,291,226 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919103 AgrOrtholog
Ensembl Genes ENSMUSG00000020571 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000052912 UniProtKB/TrEMBL
  ENSMUSP00000159304 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000057288 UniProtKB/TrEMBL
  ENSMUST00000239402 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.40.30.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Disulphide_isomerase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDIA6-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:71853 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1919103 ENTREZGENE
NCBI Gene 71853 ENTREZGENE
PANTHER PTHR45815 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Thioredoxin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pdia6 PhenoGen
PROSITE ER_TARGET UniProtKB/Swiss-Prot
  THIOREDOXIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THIOREDOXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52833 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs pdi_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F7DBQ0_MOUSE UniProtKB/TrEMBL
  PDIA6_MOUSE UniProtKB/Swiss-Prot
  Q3THH1_MOUSE UniProtKB/TrEMBL
  Q3TJL8_MOUSE UniProtKB/TrEMBL
  Q3TML0_MOUSE UniProtKB/TrEMBL
  Q922R8 ENTREZGENE
  Q9DAB4_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q8BK54 UniProtKB/Swiss-Prot