Zfp672 (zinc finger protein 672) - Rat Genome Database
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Gene: Zfp672 (zinc finger protein 672) Mus musculus
Analyze
Symbol: Zfp672
Name: zinc finger protein 672
RGD ID: 1553413
MGI Page MGI
Description: Is expressed in genitourinary system. Orthologous to human ZNF672 (zinc finger protein 672); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; Aroclor 1254.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4930488P06Rik; 4930511N19Rik; RP23-386K17.2; Znf672
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391158,205,940 - 58,221,197 (-)NCBIGRCm39mm39
GRCm39 Ensembl1158,205,940 - 58,221,165 (-)Ensembl
GRCm381158,315,114 - 58,330,368 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1158,315,114 - 58,330,339 (-)EnsemblGRCm38mm10GRCm38
MGSCv371158,128,616 - 58,136,848 (-)NCBIGRCm37mm9NCBIm37
MGSCv361158,131,411 - 58,139,308 (-)NCBImm8
Celera1163,066,218 - 63,074,462 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (ISO)
nucleus  (IBA)

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:17015433   PMID:17967808  
PMID:18287559   PMID:18799693   PMID:20059953   PMID:21267068   PMID:21677750   PMID:21873635  


Genomics

Comparative Map Data
Zfp672
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391158,205,940 - 58,221,197 (-)NCBIGRCm39mm39
GRCm39 Ensembl1158,205,940 - 58,221,165 (-)Ensembl
GRCm381158,315,114 - 58,330,368 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1158,315,114 - 58,330,339 (-)EnsemblGRCm38mm10GRCm38
MGSCv371158,128,616 - 58,136,848 (-)NCBIGRCm37mm9NCBIm37
MGSCv361158,131,411 - 58,139,308 (-)NCBImm8
Celera1163,066,218 - 63,074,462 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
ZNF672
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1248,838,210 - 248,849,517 (+)EnsemblGRCh38hg38GRCh38
GRCh381248,838,219 - 248,849,517 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371249,132,423 - 249,143,716 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361247,099,153 - 247,110,337 (+)NCBINCBI36hg18NCBI36
Celera1222,293,723 - 222,305,000 (+)NCBI
Cytogenetic Map1q44NCBI
HuRef1219,373,509 - 219,384,693 (+)NCBIHuRef
CHM1_11250,404,670 - 250,416,009 (+)NCBICHM1_1
Zfp672
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21042,496,558 - 42,512,134 (-)NCBI
Rnor_6.0 Ensembl1043,752,700 - 43,760,930 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01043,752,699 - 43,768,291 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01043,545,158 - 43,553,389 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41043,953,238 - 43,961,467 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11043,966,860 - 43,975,090 (-)NCBI
Celera1041,787,599 - 41,795,829 (-)NCBICelera
Cytogenetic Map10q22NCBI
ZNF672
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Mhudiblu_PPA_v01224,481,459 - 224,493,099 (+)NCBIMhudiblu_PPA_v0panPan3
ZNF672
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1613,740,839 - 13,744,765 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11613,737,061 - 13,746,042 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Znf672
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936609593,730 - 602,586 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF672
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl252,297,662 - 52,312,332 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1252,297,668 - 52,313,291 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2255,197,471 - 55,213,143 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF672
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12585,680,462 - 85,690,951 (+)NCBI
ChlSab1.1 Ensembl2585,688,714 - 85,690,072 (+)Ensembl


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11330000060800000Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11330000063000000Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11890000061500000Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112588179959881914Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112827504662275149Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112867832062678320Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112881775462817873Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113111738265117382Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113220975066209867Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113787775360511890Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5417484463428696Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115417484467187585Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115419011565213015Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1254
Count of miRNA genes:396
Interacting mature miRNAs:453
Transcripts:ENSMUST00000057836, ENSMUST00000064786, ENSMUST00000108829, ENSMUST00000130217, ENSMUST00000135097, ENSMUST00000155662
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001256516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001256517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001256518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001256519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001256520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_028331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_046280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK008471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL845463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB615378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF730817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG091612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU148968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY017375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY715308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA321162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV562361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV783882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV654279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000057836   ⟹   ENSMUSP00000060088
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,315,124 - 58,323,323 (-)Ensembl
RefSeq Acc Id: ENSMUST00000064786   ⟹   ENSMUSP00000070567
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,315,114 - 58,323,346 (-)Ensembl
RefSeq Acc Id: ENSMUST00000065533   ⟹   ENSMUSP00000070680
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,327,721 - 58,330,339 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108829   ⟹   ENSMUSP00000104457
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,315,216 - 58,323,113 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130217
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,319,738 - 58,323,314 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135097
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,319,704 - 58,323,314 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155662   ⟹   ENSMUSP00000114561
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,317,327 - 58,319,954 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185661
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,327,215 - 58,330,339 (-)Ensembl
RefSeq Acc Id: ENSMUST00000186859   ⟹   ENSMUSP00000140236
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,317,225 - 58,330,331 (-)Ensembl
RefSeq Acc Id: NM_001256516   ⟹   NP_001243445
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,940 - 58,214,191 (-)NCBI
GRCm381158,315,114 - 58,323,365 (-)NCBI
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001256517   ⟹   NP_001243446
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,940 - 58,214,191 (-)NCBI
GRCm381158,315,114 - 58,323,365 (-)NCBI
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001256518   ⟹   NP_001243447
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,940 - 58,213,939 (-)NCBI
GRCm381158,315,114 - 58,323,113 (-)NCBI
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001256519   ⟹   NP_001243448
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,940 - 58,214,191 (-)NCBI
GRCm381158,315,114 - 58,323,365 (-)NCBI
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001256520   ⟹   NP_001243449
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,940 - 58,221,165 (-)NCBI
GRCm381158,315,114 - 58,330,339 (-)NCBI
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_178761   ⟹   NP_848876
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,940 - 58,214,191 (-)NCBI
GRCm381158,315,114 - 58,323,365 (-)NCBI
MGSCv371158,128,616 - 58,136,848 (-)RGD
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_028331
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,210,559 - 58,214,191 (-)NCBI
GRCm381158,319,733 - 58,323,365 (-)NCBI
MGSCv371158,128,616 - 58,136,848 (-)RGD
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_046280
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,210,559 - 58,214,191 (-)NCBI
GRCm381158,319,733 - 58,323,365 (-)NCBI
Celera1163,066,218 - 63,081,484 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533520   ⟹   XP_006533583
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249069   ⟹   XP_011247371
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314590   ⟹   XP_017170079
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,164 (-)NCBI
GRCm381158,315,124 - 58,330,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314591   ⟹   XP_017170080
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246069   ⟹   XP_030101929
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246070   ⟹   XP_030101930
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246071   ⟹   XP_030101931
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,164 (-)NCBI
GRCm381158,315,124 - 58,330,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246072   ⟹   XP_030101932
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,194 (-)NCBI
GRCm381158,315,124 - 58,330,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246073   ⟹   XP_030101933
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246074   ⟹   XP_030101934
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,183 (-)NCBI
GRCm381158,315,124 - 58,330,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246075   ⟹   XP_030101935
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246076   ⟹   XP_030101936
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,165 (-)NCBI
GRCm381158,315,124 - 58,330,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246077   ⟹   XP_030101937
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246078   ⟹   XP_030101938
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
GRCm381158,315,124 - 58,330,199 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156755   ⟹   XP_036012648
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
RefSeq Acc Id: XM_036156756   ⟹   XP_036012649
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,183 (-)NCBI
RefSeq Acc Id: XM_036156757   ⟹   XP_036012650
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,024 (-)NCBI
RefSeq Acc Id: XM_036156758   ⟹   XP_036012651
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,205,950 - 58,221,197 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001243445 (Get FASTA)   NCBI Sequence Viewer  
  NP_001243446 (Get FASTA)   NCBI Sequence Viewer  
  NP_001243447 (Get FASTA)   NCBI Sequence Viewer  
  NP_001243448 (Get FASTA)   NCBI Sequence Viewer  
  NP_001243449 (Get FASTA)   NCBI Sequence Viewer  
  NP_848876 (Get FASTA)   NCBI Sequence Viewer  
  XP_006533583 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247371 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170079 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170080 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101929 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101930 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101931 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101932 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101933 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101934 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101935 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101936 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101937 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101938 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012648 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012649 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012650 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012651 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH03258 (Get FASTA)   NCBI Sequence Viewer  
  AAH34706 (Get FASTA)   NCBI Sequence Viewer  
  BAC25222 (Get FASTA)   NCBI Sequence Viewer  
  BAC25602 (Get FASTA)   NCBI Sequence Viewer  
  BAC26575 (Get FASTA)   NCBI Sequence Viewer  
  BAC28948 (Get FASTA)   NCBI Sequence Viewer  
  BAC39380 (Get FASTA)   NCBI Sequence Viewer  
  EDL07747 (Get FASTA)   NCBI Sequence Viewer  
  EDL07748 (Get FASTA)   NCBI Sequence Viewer  
  EDL07749 (Get FASTA)   NCBI Sequence Viewer  
  EDL07750 (Get FASTA)   NCBI Sequence Viewer  
  Q99LH4 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_848876   ⟸   NM_178761
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001243449   ⟸   NM_001256520
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001243446   ⟸   NM_001256517
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001243445   ⟸   NM_001256516
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001243448   ⟸   NM_001256519
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001243447   ⟸   NM_001256518
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533583   ⟸   XM_006533520
- Peptide Label: isoform X1
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011247371   ⟸   XM_011249069
- Peptide Label: isoform X1
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017170079   ⟸   XM_017314590
- Peptide Label: isoform X1
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017170080   ⟸   XM_017314591
- Peptide Label: isoform X1
- UniProtKB: Q99LH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030101932   ⟸   XM_030246072
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101934   ⟸   XM_030246074
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101936   ⟸   XM_030246076
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101931   ⟸   XM_030246071
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101938   ⟸   XM_030246078
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101933   ⟸   XM_030246073
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101937   ⟸   XM_030246077
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101935   ⟸   XM_030246075
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101930   ⟸   XM_030246070
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030101929   ⟸   XM_030246069
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000070680   ⟸   ENSMUST00000065533
RefSeq Acc Id: ENSMUSP00000140236   ⟸   ENSMUST00000186859
RefSeq Acc Id: ENSMUSP00000104457   ⟸   ENSMUST00000108829
RefSeq Acc Id: ENSMUSP00000070567   ⟸   ENSMUST00000064786
RefSeq Acc Id: ENSMUSP00000114561   ⟸   ENSMUST00000155662
RefSeq Acc Id: ENSMUSP00000060088   ⟸   ENSMUST00000057836
RefSeq Acc Id: XP_036012651   ⟸   XM_036156758
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036012649   ⟸   XM_036156756
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036012650   ⟸   XM_036156757
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036012648   ⟸   XM_036156755
- Peptide Label: isoform X1
Protein Domains
C2H2-type

Promoters
RGD ID:6846939
Promoter ID:MM_ACW:7538
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ZFP672.BSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361158,129,856 - 58,130,802 (-)MPROMDB
RGD ID:6822507
Promoter ID:MM_KWN:7551
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000108829,   NM_178761,   NM_178761_ZFP672,   NR_028331,   NR_028332,   NR_028333,   OTTMUST00000012735
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361158,136,366 - 58,137,627 (-)MPROMDB
RGD ID:8674746
Promoter ID:EPDNEW_M15404
Type:initiation region
Name:Zfp672_1
Description:Mus musculus zinc finger protein 672 , transcript variant 7,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15405  EPDNEW_M15406  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381158,323,343 - 58,323,403EPDNEW
RGD ID:8674748
Promoter ID:EPDNEW_M15405
Type:single initiation site
Name:Zfp672_3
Description:Mus musculus zinc finger protein 672 , transcript variant 7,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15404  EPDNEW_M15406  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381158,324,025 - 58,324,085EPDNEW
RGD ID:8674752
Promoter ID:EPDNEW_M15406
Type:multiple initiation site
Name:Zfp672_2
Description:Mus musculus zinc finger protein 672 , transcript variant 7,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15404  EPDNEW_M15405  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381158,330,339 - 58,330,399EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442105 AgrOrtholog
Ensembl Genes ENSMUSG00000049755 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000060088 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000070567 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000070680 UniProtKB/TrEMBL
  ENSMUSP00000104457 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000114561 UniProtKB/TrEMBL
  ENSMUSP00000140236 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000057836 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000064786 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000065533 UniProtKB/TrEMBL
  ENSMUST00000108829 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000130217 ENTREZGENE
  ENSMUST00000135097 ENTREZGENE
  ENSMUST00000155662 UniProtKB/TrEMBL
  ENSMUST00000186859 UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:319475 UniProtKB/Swiss-Prot
MGD MGI:2442105 ENTREZGENE
NCBI Gene 319475 ENTREZGENE
Pfam zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zfp672 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WQK7_MOUSE UniProtKB/TrEMBL
  A8Y5R7_MOUSE UniProtKB/TrEMBL
  Q3USW9_MOUSE UniProtKB/TrEMBL
  Q99LH4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8BIR7 UniProtKB/Swiss-Prot