Dek (DEK proto-oncogene (DNA binding)) - Rat Genome Database

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Gene: Dek (DEK proto-oncogene (DNA binding)) Mus musculus
Analyze
Symbol: Dek
Name: DEK proto-oncogene (DNA binding)
RGD ID: 1553392
MGI Page MGI
Description: Predicted to enable histone binding activity. Acts upstream of or within regulation of double-strand break repair via nonhomologous end joining. Located in contractile fiber and nucleus. Is expressed in several structures, including early conceptus; limb; liver; oocyte; and retina. Orthologous to human DEK (DEK proto-oncogene); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1810019E15Rik; D13H6S231; D13H6S231E; DEK oncogene (DNA binding)
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391347,238,243 - 47,261,134 (-)NCBIGRCm39mm39
GRCm39 Ensembl1347,238,251 - 47,259,677 (-)Ensembl
GRCm381347,084,767 - 47,107,530 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1347,084,775 - 47,106,201 (-)EnsemblGRCm38mm10GRCm38
MGSCv371347,180,136 - 47,201,589 (-)NCBIGRCm37mm9NCBIm37
MGSCv361347,095,757 - 47,117,082 (-)NCBImm8
Celera1348,169,343 - 48,190,333 (-)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1324.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-methylnicotinamide  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
4-methyl-2-oxopentanoic acid  (ISO)
5-oxo-L-proline  (ISO)
6-propyl-2-thiouracil  (ISO)
acetylsalicylic acid  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
alloxanthine  (ISO)
antimycin A  (ISO)
aristolochic acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
buspirone  (ISO)
C60 fullerene  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
chloroprene  (ISO)
choline  (ISO)
cisplatin  (EXP,ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
creatine  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dimethylamine  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP,ISO)
folic acid  (ISO)
formic acid  (ISO)
fructose  (ISO)
fulvestrant  (ISO)
furan  (ISO)
gamma-poly(L-glutamic acid) macromolecule  (ISO)
geraniol  (ISO)
glafenine  (ISO)
glucose  (ISO)
glutathione  (ISO)
glycine  (ISO)
inositol  (ISO)
ivermectin  (ISO)
kojic acid  (ISO)
L-alanine  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-nitrosodiethylamine  (EXP)
NAD zwitterion  (ISO)
NAD(+)  (ISO)
nickel atom  (EXP)
oxaliplatin  (ISO)
PCB138  (ISO)
pentachlorophenol  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
phosphocholine  (ISO)
phosphorylcholine chloride  (ISO)
picoxystrobin  (ISO)
progesterone  (ISO)
pyrimidifen  (ISO)
pyruvic acid  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP,ISO)
rotenone  (ISO)
succinic acid  (ISO)
tamoxifen  (ISO)
taurine  (ISO)
tebufenpyrad  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
titanium dioxide  (ISO)
topotecan  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
contractile fiber  (IDA)
nucleoplasm  (ISO)
nucleus  (IBA,IDA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:7959747   PMID:8211130   PMID:8521822   PMID:8938453   PMID:10349636   PMID:10391928   PMID:10716735   PMID:11042159   PMID:11076861   PMID:11812828   PMID:12477932   PMID:12520002  
PMID:12904583   PMID:14610273   PMID:15489334   PMID:15618518   PMID:16141072   PMID:16141073   PMID:16180235   PMID:16325481   PMID:17397536   PMID:17524367   PMID:18799693   PMID:19223548  
PMID:20059953   PMID:20211142   PMID:20412781   PMID:20827285   PMID:21194568   PMID:21267068   PMID:21653549   PMID:21677750   PMID:21873635   PMID:21943234   PMID:22358842   PMID:24608431  
PMID:24954505   PMID:25049225   PMID:25128083   PMID:26303528   PMID:28165452   PMID:28317934   PMID:29109007   PMID:29175155   PMID:29288703   PMID:29530978   PMID:29538372   PMID:30457570  
PMID:30783098   PMID:31107242   PMID:32098917   PMID:32325033   PMID:32502396  


Genomics

Comparative Map Data
Dek
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391347,238,243 - 47,261,134 (-)NCBIGRCm39mm39
GRCm39 Ensembl1347,238,251 - 47,259,677 (-)Ensembl
GRCm381347,084,767 - 47,107,530 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1347,084,775 - 47,106,201 (-)EnsemblGRCm38mm10GRCm38
MGSCv371347,180,136 - 47,201,589 (-)NCBIGRCm37mm9NCBIm37
MGSCv361347,095,757 - 47,117,082 (-)NCBImm8
Celera1348,169,343 - 48,190,333 (-)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1324.5NCBI
DEK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl618,223,860 - 18,264,548 (-)EnsemblGRCh38hg38GRCh38
GRCh38618,223,860 - 18,264,541 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37618,224,091 - 18,264,761 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36618,332,379 - 18,372,778 (-)NCBINCBI36hg18NCBI36
Build 34618,332,391 - 18,372,750NCBI
Celera619,462,368 - 19,502,747 (-)NCBI
Cytogenetic Map6p22.3NCBI
HuRef618,168,737 - 18,209,264 (-)NCBIHuRef
CHM1_1618,226,996 - 18,267,392 (-)NCBICHM1_1
Dek
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21717,580,804 - 17,602,825 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1717,580,843 - 17,602,808 (+)Ensembl
Rnor_6.01717,965,872 - 17,987,836 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1717,965,881 - 17,987,834 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01719,948,512 - 19,970,498 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41723,633,551 - 23,655,507 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11723,633,599 - 23,655,553 (+)NCBI
Celera1717,292,456 - 17,314,107 (+)NCBICelera
Cytogenetic Map17p14NCBI
Dek
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540828,470,207 - 28,472,083 (-)NCBIChiLan1.0ChiLan1.0
DEK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1618,425,882 - 18,465,828 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl618,427,844 - 18,465,606 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0618,071,928 - 18,112,245 (-)NCBIMhudiblu_PPA_v0panPan3
LOC100688177
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1310,279,204 - 10,280,935 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha311,622,628 - 11,624,150 (-)NCBI
ROS_Cfam_1.0310,169,743 - 10,171,465 (-)NCBI
UMICH_Zoey_3.1310,110,427 - 10,111,962 (-)NCBI
Dek
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049467,737,766 - 7,766,430 (+)NCBI
SpeTri2.0NW_0049365523,964,515 - 3,997,318 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DEK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl713,872,775 - 13,935,173 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1713,901,562 - 13,935,477 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2714,643,279 - 14,676,979 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DEK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11753,879,902 - 53,919,533 (+)NCBI
Vero_WHO_p1.0NW_02366604418,447,488 - 18,487,777 (-)NCBI
Dek
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247568,421,492 - 8,447,452 (+)NCBI

Position Markers
AI482520  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381347,084,285 - 47,084,369UniSTSGRCm38
MGSCv371347,179,654 - 47,179,738UniSTSGRCm37
Celera1348,168,861 - 48,168,945UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic Map13B1UniSTS
cM Map1328.0UniSTS
Whitehead/MRC_RH13488.43UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13390000075900000Mouse
1558898Hpi1_mhapatic PMN infiltration 1 (mouse)Not determined13436402652947604Mouse
1301880Hypt_mhypertension (mouse)Not determined131797280951972941Mouse
13463469Gssq1_mglomerulosclerosis severity QTL 1 (mouse)131887692552877067Mouse
12880423V25Dq7_mvitamin D inactive form serum level QTL 7 (mouse)131940000053400000Mouse
1301015Sysbp2_msystolic blood pressure 2 (mouse)Not determined132029344259673791Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20293442112761890Mouse
1357591Tesq1_mtestis weight QTL 1 (mouse)Not determined132043134255572704Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132043134272237070Mouse
10045618Heal17_mwound healing/regeneration 17 (mouse)Not determined132056296354563080Mouse
1558844Lith15_mlithogenic gene 15 (mouse)Not determined132176326255763430Mouse
4142489Ath25_matherosclerosis 25 (mouse)Not determined2568305359683053Mouse
10401111Pgia40_mproteoglycan induced arthritis 40 (mouse)Not determined132776499361765084Mouse
1300710Pcd4ts2_mp-glycoprotein positive CD4 T cell subset 2 (mouse)Not determined132805696662057068Mouse
1357802Vtbt15_mvertebral trabecular bone trait 15 (mouse)Not determined132806390362064039Mouse
10045621Heal21_mwound healing/regeneration 21 (mouse)Not determined132806390362064039Mouse
10755517Chol15_mcholesterol 15 (mouse)133081599164815991Mouse
10755533Chol18_mcholesterol 18 (mouse)133081599164815991Mouse
12738439Twq4_mtestis weight QTL 4 (mouse)133097563464975634Mouse
14696729Kidlq2_mkidney weight, left QTL 2 (mouse)133119126065191260Mouse
1301299Sluc23_msusceptibility to lung cancer 23 (mouse)Not determined133476790768768045Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133587692596102654Mouse
1301734Acsns2_mAngiostrongylus costaricensis nematode susceptibility 2 (mouse)Not determined133594749469947604Mouse
1357587Pfat3_mpredicted fat percentage 3 (mouse)Not determined133594749469947604Mouse
1300561Heal7_mwound healing/regeneration 7 (mouse)Not determined133599078469990868Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133857254572572704Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133948143673481584Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133948143673481584Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133948143673481584Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134044044074440440Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134134122875341344Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4505696683596627Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134505696683596627Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:599
Count of miRNA genes:421
Interacting mature miRNAs:475
Transcripts:ENSMUST00000021807, ENSMUST00000129352, ENSMUST00000135278, ENSMUST00000138401, ENSMUST00000143933, ENSMUST00000150652
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_025900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_382230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC096628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV449751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC055451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU920290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY429959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000021807   ⟹   ENSMUSP00000021807
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1347,238,258 - 47,259,666 (-)Ensembl
GRCm38.p6 Ensembl1347,084,782 - 47,106,190 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129352   ⟹   ENSMUSP00000114392
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1347,251,631 - 47,259,306 (-)Ensembl
GRCm38.p6 Ensembl1347,098,155 - 47,105,830 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135278   ⟹   ENSMUSP00000121663
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1347,242,071 - 47,259,677 (-)Ensembl
GRCm38.p6 Ensembl1347,088,595 - 47,106,201 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138401
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1347,238,251 - 47,251,914 (-)Ensembl
GRCm38.p6 Ensembl1347,084,775 - 47,098,438 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143933
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1347,254,963 - 47,259,630 (-)Ensembl
GRCm38.p6 Ensembl1347,101,487 - 47,106,154 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150652
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1347,258,857 - 47,259,659 (-)Ensembl
GRCm38.p6 Ensembl1347,105,381 - 47,106,183 (-)Ensembl
RefSeq Acc Id: ENSMUST00000224150   ⟹   ENSMUSP00000153538
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1347,239,408 - 47,251,813 (-)Ensembl
GRCm38.p6 Ensembl1347,085,932 - 47,098,337 (-)Ensembl
RefSeq Acc Id: NM_025900   ⟹   NP_080176
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391347,238,243 - 47,259,697 (-)NCBI
GRCm381347,084,767 - 47,106,221 (-)NCBI
MGSCv371347,180,136 - 47,201,589 (-)RGD
Celera1348,169,343 - 48,190,333 (-)RGD
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036157833   ⟹   XP_036013726
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391347,238,258 - 47,261,134 (-)NCBI
RefSeq Acc Id: XR_382230
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391347,238,258 - 47,261,006 (-)NCBI
GRCm381347,084,782 - 47,107,530 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_080176   ⟸   NM_025900
- UniProtKB: Q7TNV0 (UniProtKB/Swiss-Prot),   Q3UR53 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000153538   ⟸   ENSMUST00000224150
RefSeq Acc Id: ENSMUSP00000121663   ⟸   ENSMUST00000135278
RefSeq Acc Id: ENSMUSP00000114392   ⟸   ENSMUST00000129352
RefSeq Acc Id: ENSMUSP00000021807   ⟸   ENSMUST00000021807
RefSeq Acc Id: XP_036013726   ⟸   XM_036157833
- Peptide Label: isoform X1
Protein Domains
DEK_C   SAP

Promoters
RGD ID:8680250
Promoter ID:EPDNEW_M18156
Type:initiation region
Name:Dek_2
Description:Mus musculus DEK oncogene , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18157  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381347,105,844 - 47,105,904EPDNEW
RGD ID:8680252
Promoter ID:EPDNEW_M18157
Type:initiation region
Name:Dek_1
Description:Mus musculus DEK oncogene , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18156  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381347,106,194 - 47,106,254EPDNEW
RGD ID:6823544
Promoter ID:MM_KWN:14001
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4
Transcripts:AK006396_1700026N04RIK,   NM_025900,   OTTMUST00000061017,   OTTMUST00000061019,   OTTMUST00000061020,   OTTMUST00000061021
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361347,200,576 - 47,201,837 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926209 AgrOrtholog
Ensembl Genes ENSMUSG00000021377 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000021807 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000114392 UniProtKB/TrEMBL
  ENSMUSP00000121663 UniProtKB/TrEMBL
  ENSMUSP00000153538 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000021807 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000129352 UniProtKB/TrEMBL
  ENSMUST00000135278 UniProtKB/TrEMBL
  ENSMUST00000224150 UniProtKB/TrEMBL
Gene3D-CATH 1.10.720.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DEK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DEK_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAP_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:110052 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1926209 ENTREZGENE
NCBI Gene 110052 ENTREZGENE
PANTHER PTHR13468 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DEK_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dek PhenoGen
SMART SAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF68906 UniProtKB/TrEMBL
UniProt A0A286YDS8_MOUSE UniProtKB/TrEMBL
  D3YVJ6_MOUSE UniProtKB/TrEMBL
  DEK_MOUSE UniProtKB/Swiss-Prot
  E9Q8Y1_MOUSE UniProtKB/TrEMBL
  Q3U4W4_MOUSE UniProtKB/TrEMBL
  Q3UR53 ENTREZGENE, UniProtKB/TrEMBL
  Q7TNV0 ENTREZGENE
  Q9CVL7_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q80VC5 UniProtKB/Swiss-Prot
  Q8BZV6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-18 Dek  DEK proto-oncogene (DNA binding)  Dek  DEK oncogene (DNA binding)  Symbol and/or name change 5135510 APPROVED