Zmynd8 (zinc finger, MYND-type containing 8) - Rat Genome Database

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Gene: Zmynd8 (zinc finger, MYND-type containing 8) Mus musculus
Analyze
Symbol: Zmynd8
Name: zinc finger, MYND-type containing 8
RGD ID: 1553257
MGI Page MGI
Description: Predicted to enable several functions, including histone binding activity; protein N-terminus binding activity; and zinc ion binding activity. Predicted to be involved in several processes, including positive regulation of dendritic spine development; positive regulation of filopodium assembly; and regulation of postsynapse organization. Predicted to be located in Golgi apparatus; dendrite; and nucleoplasm. Is expressed in early conceptus and genitourinary system. Orthologous to human ZMYND8 (zinc finger MYND-type containing 8); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1110013E22Rik; 2010005I16Rik; 3632413B07Rik; AI316811; AL024039; MGC25852; mKIAA1125; Prkc; Prkcbp1; protein kinase C binding protein 1; protein kinase C-binding protein 1; RAC; RACK7; ZMYND
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm20749   Gm21122   Gm21152   Gm9226   Gm9246  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392165,626,072 - 165,740,896 (-)NCBIGRCm39mm39
GRCm39 Ensembl2165,626,072 - 165,740,936 (-)Ensembl
GRCm382165,784,152 - 165,898,981 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2165,784,152 - 165,899,016 (-)EnsemblGRCm38mm10GRCm38
MGSCv372165,609,654 - 165,710,188 (-)NCBIGRCm37mm9NCBIm37
MGSCv362165,476,506 - 165,588,155 (-)NCBImm8
Celera2171,721,138 - 171,822,027 (-)NCBICelera
Cytogenetic Map2H3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
bromobenzene  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chrysene  (EXP)
cisplatin  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
dioxygen  (EXP)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP)
finasteride  (ISO)
folic acid  (EXP,ISO)
formaldehyde  (ISO)
gallic acid  (ISO)
genistein  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
ketamine  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
lithium chloride  (ISO)
methamphetamine  (EXP)
methylmercury chloride  (ISO)
nicotine  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
pentachlorophenol  (EXP)
phenobarbital  (EXP)
piroxicam  (ISO)
potassium chromate  (ISO)
rac-lactic acid  (ISO)
Soman  (ISO)
succimer  (EXP)
tetrachloromethane  (EXP)
tetraphene  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
tungsten  (EXP)
tunicamycin  (EXP)
valproic acid  (ISO)
versicolorin A  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)
vorinostat  (ISO)

References

Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12465718   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14691545  
PMID:15741177   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18287559   PMID:18799693   PMID:20059953   PMID:20412781   PMID:21267068   PMID:21677750   PMID:22988430   PMID:25838543  
PMID:26206133   PMID:27984743   PMID:28232094   PMID:30293785   PMID:30395227   PMID:33932349  


Genomics

Comparative Map Data
Zmynd8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392165,626,072 - 165,740,896 (-)NCBIGRCm39mm39
GRCm39 Ensembl2165,626,072 - 165,740,936 (-)Ensembl
GRCm382165,784,152 - 165,898,981 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2165,784,152 - 165,899,016 (-)EnsemblGRCm38mm10GRCm38
MGSCv372165,609,654 - 165,710,188 (-)NCBIGRCm37mm9NCBIm37
MGSCv362165,476,506 - 165,588,155 (-)NCBImm8
Celera2171,721,138 - 171,822,027 (-)NCBICelera
Cytogenetic Map2H3NCBI
ZMYND8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2047,209,214 - 47,356,889 (-)EnsemblGRCh38hg38GRCh38
GRCh382047,209,214 - 47,356,699 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372045,837,859 - 45,985,443 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362045,271,788 - 45,418,881 (-)NCBINCBI36hg18NCBI36
Build 342045,271,787 - 45,418,881NCBI
Celera2042,552,068 - 42,699,142 (-)NCBI
Cytogenetic Map20q13.12NCBI
HuRef2042,581,845 - 42,728,430 (-)NCBIHuRef
CHM1_12045,741,275 - 45,888,362 (-)NCBICHM1_1
Zmynd8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23154,528,917 - 154,629,532 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl3154,529,043 - 154,628,463 (-)Ensembl
Rnor_6.03162,480,766 - 162,594,145 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3162,480,804 - 162,581,610 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03168,658,022 - 168,771,422 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43156,860,459 - 156,957,748 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13156,766,803 - 156,865,056 (-)NCBI
Celera3153,120,868 - 153,217,849 (-)NCBICelera
Cytogenetic Map3q42NCBI
Zmynd8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544510,229,902 - 10,363,350 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544510,226,031 - 10,361,371 (+)NCBIChiLan1.0ChiLan1.0
ZMYND8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12044,624,487 - 44,784,920 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2044,624,487 - 44,772,032 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02043,540,819 - 43,701,322 (-)NCBIMhudiblu_PPA_v0panPan3
ZMYND8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12434,322,364 - 34,466,044 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2434,321,570 - 34,485,544 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2433,781,364 - 33,924,600 (-)NCBI
ROS_Cfam_1.02435,030,998 - 35,174,588 (-)NCBI
UMICH_Zoey_3.12434,286,297 - 34,429,942 (-)NCBI
UNSW_CanFamBas_1.02434,404,299 - 34,548,003 (-)NCBI
UU_Cfam_GSD_1.02434,944,918 - 35,088,181 (-)NCBI
Zmynd8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640190,662,525 - 190,760,665 (+)NCBI
SpeTri2.0NW_0049365146,116,789 - 6,214,383 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZMYND8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1749,258,542 - 49,390,399 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11749,258,543 - 49,390,418 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21755,169,682 - 55,300,653 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZMYND8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1216,547,144 - 16,696,729 (+)NCBI
ChlSab1.1 Ensembl216,622,702 - 16,696,878 (+)Ensembl
Vero_WHO_p1.0NW_02366605065,181,903 - 65,331,185 (+)NCBI
Zmynd8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247907,473,739 - 7,611,612 (+)NCBI

Position Markers
RH136126  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382165,784,659 - 165,784,786UniSTSGRCm38
MGSCv372165,610,159 - 165,610,286UniSTSGRCm37
Celera2171,721,642 - 171,721,769UniSTS
Cytogenetic Map2H3UniSTS
D2Mit311  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382165,822,973 - 165,823,099UniSTSGRCm38
MGSCv372165,648,473 - 165,648,599UniSTSGRCm37
Celera2171,760,394 - 171,760,508UniSTS
Cytogenetic Map2H3UniSTS
cM Map283.1UniSTS
Whitehead Genetic283.1UniSTS
Whitehead/MRC_RH21888.07UniSTS
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
RH124633  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382165,856,125 - 165,856,266UniSTSGRCm38
MGSCv372165,681,625 - 165,681,766UniSTSGRCm37
Celera2171,793,474 - 171,793,615UniSTS
Cytogenetic Map2H3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301677Alcp6_malcohol preference locus 6 (mouse)Not determined2163844614182113224Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145676855179677006Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2118112449174483070Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132182239166182410Mouse
1302003Sluc17_msusceptibility to lung cancer 17 (mouse)Not determined2162791700182113224Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152857301169276004Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145355029179355165Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142751556178800659Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145386799179386921Mouse
1357435Epfq2_mepididymal fat pad weight QTL 2 (mouse)Not determined2162895006178800659Mouse
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135857301169857441Mouse
1558991Tailq4_mtail length QTL 4 (mouse)Not determined2162895006178800659Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2139124680173124809Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144673941181254801Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155982127182113224Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156354671182113224Mouse
1300676Prdt2_mprion disease incubation time 2 (mouse)Not determined2164873361182113224Mouse
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158236417178800659Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2150146982182113224Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151936377182113224Mouse
1301378Hpdty_mhindlimb polydactyly (mouse)Not determined2165822973168781758Mouse
1301348Alcp5_malcohol preference locus 5 (mouse)Not determined2163844614182113224Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150370301182113224Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143931525165823099Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149394987182113224Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143931525169276004Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148822973182113224Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135857301169857441Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285893925181254801Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135857301169857441Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135857301169857441Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150370301182113224Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142586427176586530Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150370301182113224Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148396284182113224Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133302991167303138Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133302991167303138Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151867353174547331Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152487900182113224Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124600000168400000Mouse
12801461Intim1_mintima modifier 1 (mouse)2142586427176586530Mouse
11353826Bdln10_mbody length 10 (mouse)2140599562174599562Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135590624173607823Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103265371167370436Mouse
12910810Pwbwq2_mpre-weaning body weight QTL 2 (mouse)2160769245169952882Mouse
12910800Pwgrq3_mpre-weaning growth rate QTL 3 (mouse)2160769245169952882Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5813
Count of miRNA genes:846
Interacting mature miRNAs:1194
Transcripts:ENSMUST00000018050, ENSMUST00000088113, ENSMUST00000099084, ENSMUST00000109258, ENSMUST00000109262, ENSMUST00000109266, ENSMUST00000109269, ENSMUST00000124085, ENSMUST00000134557, ENSMUST00000136842, ENSMUST00000139202, ENSMUST00000139907, ENSMUST00000144530, ENSMUST00000146204, ENSMUST00000148674, ENSMUST00000149369, ENSMUST00000150564, ENSMUST00000150871, ENSMUST00000152682, ENSMUST00000153655, ENSMUST00000170272, ENSMUST00000177633
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001281926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_027230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB093284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK021201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL589902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL591712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL928840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV335257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB741303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC041797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM933817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA328656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF537480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK634740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN536818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN670238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO428932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000018050   ⟹   ENSMUSP00000018050
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,627,202 - 165,726,692 (-)Ensembl
GRCm38.p6 Ensembl2165,785,282 - 165,884,772 (-)Ensembl
RefSeq Acc Id: ENSMUST00000088113   ⟹   ENSMUSP00000085436
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,627,439 - 165,726,794 (-)Ensembl
GRCm38.p6 Ensembl2165,785,519 - 165,884,874 (-)Ensembl
RefSeq Acc Id: ENSMUST00000099084   ⟹   ENSMUSP00000096683
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,626,075 - 165,724,198 (-)Ensembl
GRCm38.p6 Ensembl2165,784,155 - 165,882,278 (-)Ensembl
RefSeq Acc Id: ENSMUST00000109262   ⟹   ENSMUSP00000104885
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,669,102 - 165,738,870 (-)Ensembl
GRCm38.p6 Ensembl2165,827,182 - 165,896,950 (-)Ensembl
RefSeq Acc Id: ENSMUST00000109266   ⟹   ENSMUSP00000104889
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,626,072 - 165,700,093 (-)Ensembl
GRCm38.p6 Ensembl2165,784,152 - 165,858,173 (-)Ensembl
RefSeq Acc Id: ENSMUST00000109269   ⟹   ENSMUSP00000104892
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,627,229 - 165,720,357 (-)Ensembl
GRCm38.p6 Ensembl2165,785,309 - 165,878,437 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124085
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,716,797 - 165,726,159 (-)Ensembl
GRCm38.p6 Ensembl2165,874,877 - 165,884,239 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134557
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,717,075 - 165,718,110 (-)Ensembl
GRCm38.p6 Ensembl2165,875,155 - 165,876,190 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136842   ⟹   ENSMUSP00000120631
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,681,961 - 165,740,936 (-)Ensembl
GRCm38.p6 Ensembl2165,840,041 - 165,899,016 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139202
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,687,664 - 165,694,042 (-)Ensembl
GRCm38.p6 Ensembl2165,845,744 - 165,852,122 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139907
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,684,703 - 165,703,925 (-)Ensembl
GRCm38.p6 Ensembl2165,842,783 - 165,862,005 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144530   ⟹   ENSMUSP00000121363
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,693,953 - 165,718,328 (-)Ensembl
GRCm38.p6 Ensembl2165,852,033 - 165,876,408 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146204
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,693,954 - 165,721,822 (-)Ensembl
GRCm38.p6 Ensembl2165,852,034 - 165,879,902 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148674
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,717,177 - 165,726,671 (-)Ensembl
GRCm38.p6 Ensembl2165,875,257 - 165,884,751 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149369
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,675,271 - 165,700,093 (-)Ensembl
GRCm38.p6 Ensembl2165,833,351 - 165,858,173 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150564
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,714,947 - 165,726,130 (-)Ensembl
GRCm38.p6 Ensembl2165,873,027 - 165,884,210 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150871
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,693,953 - 165,718,520 (-)Ensembl
GRCm38.p6 Ensembl2165,852,033 - 165,876,600 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152682
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,627,229 - 165,726,568 (-)Ensembl
GRCm38.p6 Ensembl2165,785,309 - 165,884,648 (-)Ensembl
RefSeq Acc Id: ENSMUST00000153655   ⟹   ENSMUSP00000120932
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,669,049 - 165,717,697 (-)Ensembl
GRCm38.p6 Ensembl2165,827,129 - 165,875,777 (-)Ensembl
RefSeq Acc Id: ENSMUST00000170272   ⟹   ENSMUSP00000128680
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,626,075 - 165,724,198 (-)Ensembl
GRCm38.p6 Ensembl2165,784,155 - 165,882,278 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177633   ⟹   ENSMUSP00000136211
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2165,626,072 - 165,726,671 (-)Ensembl
GRCm38.p6 Ensembl2165,784,152 - 165,884,751 (-)Ensembl
RefSeq Acc Id: NM_001252584   ⟹   NP_001239513
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,726,758 (-)NCBI
GRCm382165,784,152 - 165,884,838 (-)NCBI
Celera2171,721,136 - 171,822,177 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252585   ⟹   NP_001239514
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,700,093 (-)NCBI
GRCm382165,784,152 - 165,858,173 (-)NCBI
Celera2171,721,136 - 171,822,177 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252587   ⟹   NP_001239516
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,669,044 - 165,726,758 (-)NCBI
GRCm382165,827,124 - 165,884,838 (-)NCBI
Celera2171,721,136 - 171,822,177 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001281926   ⟹   NP_001268855
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,724,198 (-)NCBI
GRCm382165,784,152 - 165,882,278 (-)NCBI
Celera2171,721,136 - 171,822,177 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291158   ⟹   NP_001278087
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,720,357 (-)NCBI
GRCm382165,784,152 - 165,878,437 (-)NCBI
Celera2171,721,136 - 171,822,177 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363018   ⟹   NP_001349947
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,722,090 (-)NCBI
GRCm382165,784,152 - 165,880,170 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363019   ⟹   NP_001349948
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,721,450 (-)NCBI
GRCm382165,784,152 - 165,879,530 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363020   ⟹   NP_001349949
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,726,758 (-)NCBI
GRCm382165,784,152 - 165,884,838 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363021   ⟹   NP_001349950
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,669,044 - 165,720,357 (-)NCBI
GRCm382165,827,124 - 165,878,437 (-)NCBI
Sequence:
RefSeq Acc Id: NM_027230   ⟹   NP_081506
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,072 - 165,726,758 (-)NCBI
GRCm382165,784,152 - 165,884,838 (-)NCBI
MGSCv372165,609,654 - 165,710,188 (-)RGD
Celera2171,721,136 - 171,822,177 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006499378   ⟹   XP_006499441
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,740,896 (-)NCBI
GRCm382165,784,154 - 165,898,981 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499384   ⟹   XP_006499447
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,722,494 (-)NCBI
GRCm382165,784,154 - 165,880,268 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499387   ⟹   XP_006499450
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,700,450 (-)NCBI
GRCm382165,784,154 - 165,858,527 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499390   ⟹   XP_006499453
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,740,895 (-)NCBI
GRCm382165,784,154 - 165,898,980 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499391   ⟹   XP_006499454
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,721,438 (-)NCBI
GRCm382165,784,154 - 165,879,523 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499397   ⟹   XP_006499460
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,720,398 (-)NCBI
GRCm382165,784,154 - 165,878,478 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499403   ⟹   XP_006499466
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,700,450 (-)NCBI
GRCm382165,784,154 - 165,858,527 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499408   ⟹   XP_006499471
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,721,351 (-)NCBI
GRCm382165,784,154 - 165,879,431 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499414   ⟹   XP_006499477
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,086 - 165,727,511 (-)NCBI
GRCm382165,784,166 - 165,885,581 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499418   ⟹   XP_006499481
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,556 (-)NCBI
GRCm382165,784,154 - 165,845,961 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499419   ⟹   XP_006499482
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,720,951 (-)NCBI
GRCm382165,784,154 - 165,879,387 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239502   ⟹   XP_011237804
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
GRCm382165,784,154 - 165,875,775 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239503   ⟹   XP_011237805
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,717,695 (-)NCBI
GRCm382165,784,154 - 165,875,775 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239505   ⟹   XP_011237807
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,717,695 (-)NCBI
GRCm382165,784,154 - 165,875,775 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239508   ⟹   XP_011237810
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,725,313 (-)NCBI
GRCm382165,784,154 - 165,883,393 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239510   ⟹   XP_011237812
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,721,351 (-)NCBI
GRCm382165,784,154 - 165,879,431 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317920   ⟹   XP_017173409
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,717,695 (-)NCBI
GRCm382165,784,154 - 165,875,775 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317954   ⟹   XP_017173443
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,718,400 (-)NCBI
GRCm382165,784,154 - 165,878,478 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250685   ⟹   XP_030106545
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
GRCm382165,784,154 - 165,884,697 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250694   ⟹   XP_030106554
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
GRCm382165,784,154 - 165,884,697 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250706   ⟹   XP_030106566
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
GRCm382165,784,154 - 165,884,697 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250708   ⟹   XP_030106568
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,722,494 (-)NCBI
GRCm382165,784,154 - 165,880,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250710   ⟹   XP_030106570
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
GRCm382165,784,154 - 165,884,697 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250723   ⟹   XP_030106583
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
GRCm382165,784,154 - 165,884,697 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250733   ⟹   XP_030106593
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,721,951 (-)NCBI
GRCm382165,784,154 - 165,880,031 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161655   ⟹   XP_036017548
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,721,438 (-)NCBI
RefSeq Acc Id: XM_036161656   ⟹   XP_036017549
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,721,283 (-)NCBI
RefSeq Acc Id: XM_036161657   ⟹   XP_036017550
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,037 (-)NCBI
RefSeq Acc Id: XM_036161658   ⟹   XP_036017551
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,725,980 (-)NCBI
RefSeq Acc Id: XM_036161659   ⟹   XP_036017552
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,722,586 (-)NCBI
RefSeq Acc Id: XM_036161665   ⟹   XP_036017558
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,086 - 165,726,617 (-)NCBI
RefSeq Acc Id: XM_036161666   ⟹   XP_036017559
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,727,511 (-)NCBI
RefSeq Acc Id: XM_036161668   ⟹   XP_036017561
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,086 - 165,722,494 (-)NCBI
RefSeq Acc Id: XM_036161671   ⟹   XP_036017564
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,720,398 (-)NCBI
RefSeq Acc Id: XM_036161674   ⟹   XP_036017567
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,014 (-)NCBI
RefSeq Acc Id: XM_036161676   ⟹   XP_036017569
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,086 - 165,726,617 (-)NCBI
RefSeq Acc Id: XM_036161677   ⟹   XP_036017570
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,722,494 (-)NCBI
RefSeq Acc Id: XM_036161679   ⟹   XP_036017572
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
RefSeq Acc Id: XM_036161680   ⟹   XP_036017573
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
RefSeq Acc Id: XM_036161681   ⟹   XP_036017574
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,086 - 165,700,088 (-)NCBI
RefSeq Acc Id: XM_036161685   ⟹   XP_036017578
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
RefSeq Acc Id: XM_036161686   ⟹   XP_036017579
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
RefSeq Acc Id: XM_036161688   ⟹   XP_036017581
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,726,617 (-)NCBI
RefSeq Acc Id: XM_036161691   ⟹   XP_036017584
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392165,626,074 - 165,717,695 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001239513 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239514 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239516 (Get FASTA)   NCBI Sequence Viewer  
  NP_001268855 (Get FASTA)   NCBI Sequence Viewer  
  NP_001278087 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349947 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349948 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349949 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349950 (Get FASTA)   NCBI Sequence Viewer  
  NP_081506 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499441 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499447 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499450 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499453 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499454 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499460 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499466 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499471 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499477 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499481 (Get FASTA)   NCBI Sequence Viewer  
  XP_006499482 (Get FASTA)   NCBI Sequence Viewer  
  XP_011237804 (Get FASTA)   NCBI Sequence Viewer  
  XP_011237805 (Get FASTA)   NCBI Sequence Viewer  
  XP_011237807 (Get FASTA)   NCBI Sequence Viewer  
  XP_011237810 (Get FASTA)   NCBI Sequence Viewer  
  XP_011237812 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173409 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173443 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106545 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106554 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106566 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106568 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106570 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106583 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106593 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017548 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017549 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017550 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017551 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017552 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017558 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017559 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017561 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017564 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017567 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017569 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017570 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017572 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017573 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017574 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017578 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017579 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017581 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017584 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH41797 (Get FASTA)   NCBI Sequence Viewer  
  AAH48186 (Get FASTA)   NCBI Sequence Viewer  
  AAH63267 (Get FASTA)   NCBI Sequence Viewer  
  BAB25478 (Get FASTA)   NCBI Sequence Viewer  
  BAC41468 (Get FASTA)   NCBI Sequence Viewer  
  BAE21162 (Get FASTA)   NCBI Sequence Viewer  
  BAE23921 (Get FASTA)   NCBI Sequence Viewer  
  BAE28029 (Get FASTA)   NCBI Sequence Viewer  
  BAE33468 (Get FASTA)   NCBI Sequence Viewer  
  BAE43241 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_081506   ⟸   NM_027230
- Peptide Label: isoform 1
- UniProtKB: Q3UH28 (UniProtKB/TrEMBL),   Q80Y82 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239513   ⟸   NM_001252584
- Peptide Label: isoform 2
- UniProtKB: Q3U1M7 (UniProtKB/TrEMBL),   Q3UH28 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239514   ⟸   NM_001252585
- Peptide Label: isoform 3
- UniProtKB: E9Q8D1 (UniProtKB/TrEMBL),   Q3UH28 (UniProtKB/TrEMBL),   Q3V1I9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239516   ⟸   NM_001252587
- Peptide Label: isoform 4
- Sequence:
RefSeq Acc Id: NP_001268855   ⟸   NM_001281926
- Peptide Label: isoform 5
- UniProtKB: Q3UH28 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499453   ⟸   XM_006499390
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006499441   ⟸   XM_006499378
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006499477   ⟸   XM_006499414
- Peptide Label: isoform X23
- UniProtKB: Q3U1M7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499447   ⟸   XM_006499384
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006499454   ⟸   XM_006499391
- Peptide Label: isoform X8
- UniProtKB: A2A484 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499471   ⟸   XM_006499408
- Peptide Label: isoform X18
- UniProtKB: A2A482 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499460   ⟸   XM_006499397
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006499466   ⟸   XM_006499403
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_006499450   ⟸   XM_006499387
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006499481   ⟸   XM_006499418
- Peptide Label: isoform X26
- Sequence:
RefSeq Acc Id: XP_006499482   ⟸   XM_006499419
- Peptide Label: isoform X26
- Sequence:
RefSeq Acc Id: NP_001278087   ⟸   NM_001291158
- Peptide Label: isoform 6
- UniProtKB: A2A484 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237810   ⟸   XM_011239508
- Peptide Label: isoform X8
- UniProtKB: A2A484 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237812   ⟸   XM_011239510
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_011237807   ⟸   XM_011239505
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_011237805   ⟸   XM_011239503
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011237804   ⟸   XM_011239502
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_017173443   ⟸   XM_017317954
- Peptide Label: isoform X22
- UniProtKB: A2A483 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173409   ⟸   XM_017317920
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001349949   ⟸   NM_001363020
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001349947   ⟸   NM_001363018
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001349948   ⟸   NM_001363019
- Peptide Label: isoform 8
RefSeq Acc Id: XP_030106566   ⟸   XM_030250706
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030106583   ⟸   XM_030250723
- Peptide Label: isoform X18
RefSeq Acc Id: XP_030106554   ⟸   XM_030250694
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030106570   ⟸   XM_030250710
- Peptide Label: isoform X17
RefSeq Acc Id: XP_030106545   ⟸   XM_030250685
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030106568   ⟸   XM_030250708
- Peptide Label: isoform X12
RefSeq Acc Id: XP_030106593   ⟸   XM_030250733
- Peptide Label: isoform X26
RefSeq Acc Id: NP_001349950   ⟸   NM_001363021
- Peptide Label: isoform 10
RefSeq Acc Id: ENSMUSP00000128680   ⟸   ENSMUST00000170272
RefSeq Acc Id: ENSMUSP00000121363   ⟸   ENSMUST00000144530
RefSeq Acc Id: ENSMUSP00000096683   ⟸   ENSMUST00000099084
RefSeq Acc Id: ENSMUSP00000136211   ⟸   ENSMUST00000177633
RefSeq Acc Id: ENSMUSP00000085436   ⟸   ENSMUST00000088113
RefSeq Acc Id: ENSMUSP00000104885   ⟸   ENSMUST00000109262
RefSeq Acc Id: ENSMUSP00000104889   ⟸   ENSMUST00000109266
RefSeq Acc Id: ENSMUSP00000104892   ⟸   ENSMUST00000109269
RefSeq Acc Id: ENSMUSP00000120932   ⟸   ENSMUST00000153655
RefSeq Acc Id: ENSMUSP00000120631   ⟸   ENSMUST00000136842
RefSeq Acc Id: ENSMUSP00000018050   ⟸   ENSMUST00000018050
RefSeq Acc Id: XP_036017559   ⟸   XM_036161666
- Peptide Label: isoform X14
RefSeq Acc Id: XP_036017572   ⟸   XM_036161679
- Peptide Label: isoform X22
RefSeq Acc Id: XP_036017578   ⟸   XM_036161685
- Peptide Label: isoform X26
RefSeq Acc Id: XP_036017579   ⟸   XM_036161686
- Peptide Label: isoform X26
RefSeq Acc Id: XP_036017573   ⟸   XM_036161680
- Peptide Label: isoform X24
RefSeq Acc Id: XP_036017581   ⟸   XM_036161688
- Peptide Label: isoform X26
RefSeq Acc Id: XP_036017550   ⟸   XM_036161657
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036017567   ⟸   XM_036161674
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036017551   ⟸   XM_036161658
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036017552   ⟸   XM_036161659
- Peptide Label: isoform X10
RefSeq Acc Id: XP_036017570   ⟸   XM_036161677
- Peptide Label: isoform X21
RefSeq Acc Id: XP_036017548   ⟸   XM_036161655
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036017549   ⟸   XM_036161656
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036017564   ⟸   XM_036161671
- Peptide Label: isoform X17
RefSeq Acc Id: XP_036017584   ⟸   XM_036161691
- Peptide Label: isoform X27
RefSeq Acc Id: XP_036017558   ⟸   XM_036161665
- Peptide Label: isoform X13
RefSeq Acc Id: XP_036017569   ⟸   XM_036161676
- Peptide Label: isoform X20
RefSeq Acc Id: XP_036017561   ⟸   XM_036161668
- Peptide Label: isoform X16
RefSeq Acc Id: XP_036017574   ⟸   XM_036161681
- Peptide Label: isoform X25
Protein Domains
Bromo   MYND-type   PHD-type   PWWP

Promoters
RGD ID:6847699
Promoter ID:MM_ACW:30514
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour
Transcripts:PRKCBP1.VKSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,618,104 - 165,618,604 (-)MPROMDB
RGD ID:6847682
Promoter ID:MM_ACW:30515
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:PRKCBP1.MSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,619,831 - 165,620,331 (-)MPROMDB
RGD ID:6847680
Promoter ID:MM_ACW:30518
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:PRKCBP1.GSEP07,   PRKCBP1.VFSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,633,211 - 165,633,711 (-)MPROMDB
RGD ID:6847681
Promoter ID:MM_ACW:30519
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:PRKCBP1.JSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,640,731 - 165,641,231 (-)MPROMDB
RGD ID:6847686
Promoter ID:MM_ACW:30521
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:PRKCBP1.TSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,653,651 - 165,654,151 (-)MPROMDB
RGD ID:6832122
Promoter ID:MM_KWN:33024
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   Kidney
Transcripts:OTTMUST00000002203
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,677,591 - 165,678,242 (-)MPROMDB
RGD ID:6833142
Promoter ID:MM_KWN:33025
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:ENSMUST00000099083
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,678,769 - 165,679,269 (-)MPROMDB
RGD ID:6832127
Promoter ID:MM_KWN:33027
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   ES_Cell,   Lung,   MEF_B6
Transcripts:OTTMUST00000038582,   UC008NYA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,683,606 - 165,684,672 (-)MPROMDB
RGD ID:6832128
Promoter ID:MM_KWN:33028
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Kidney
Transcripts:OTTMUST00000038581
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,686,936 - 165,687,436 (-)MPROMDB
RGD ID:6847713
Promoter ID:MM_ACW:30523
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   MEF_B4
Transcripts:PRKCBP1.VPSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,700,536 - 165,701,036 (-)MPROMDB
RGD ID:6832126
Promoter ID:MM_KWN:33029
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   Brain,   Kidney
Transcripts:OTTMUST00000002200,   OTTMUST00000002211,   OTTMUST00000038531,   OTTMUST00000038583,   UC008NYB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,702,181 - 165,703,132 (-)MPROMDB
RGD ID:6831833
Promoter ID:MM_KWN:33030
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney
Transcripts:OTTMUST00000002202,   OTTMUST00000002212,   UC008NYG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,704,481 - 165,706,002 (-)MPROMDB
RGD ID:6833143
Promoter ID:MM_KWN:33031
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000099084
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,707,701 - 165,708,772 (-)MPROMDB
RGD ID:6849127
Promoter ID:MM_XEF:4370
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   MEF_B4,   MEF_B6
Transcripts:NM_001100838
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,708,936 - 165,709,672 (-)MPROMDB
RGD ID:6831828
Promoter ID:MM_KWN:33032
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000018050,   ENSMUST00000088113,   ENSMUST00000109257,   ENSMUST00000109266,   NM_027230,   OTTMUST00000002201,   OTTMUST00000002205,   OTTMUST00000002208,   UC008NYD.1,   UC008NYH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362165,709,701 - 165,711,372 (-)MPROMDB
RGD ID:6879744
Promoter ID:EPDNEW_M3323
Type:initiation region
Name:Zmynd8_3
Description:Mus musculus zinc finger, MYND-type containing 8 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3324  EPDNEW_M3325  EPDNEW_M3326  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382165,858,173 - 165,858,233EPDNEW
RGD ID:6879746
Promoter ID:EPDNEW_M3324
Type:initiation region
Name:Zmynd8_4
Description:Mus musculus zinc finger, MYND-type containing 8 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3323  EPDNEW_M3325  EPDNEW_M3326  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382165,879,610 - 165,879,670EPDNEW
RGD ID:6879748
Promoter ID:EPDNEW_M3325
Type:multiple initiation site
Name:Zmynd8_2
Description:Mus musculus zinc finger, MYND-type containing 8 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3323  EPDNEW_M3324  EPDNEW_M3326  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382165,884,210 - 165,884,270EPDNEW
RGD ID:6879750
Promoter ID:EPDNEW_M3326
Type:initiation region
Name:Zmynd8_1
Description:Mus musculus zinc finger, MYND-type containing 8 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3323  EPDNEW_M3324  EPDNEW_M3325  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382165,884,646 - 165,884,706EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1918025 AgrOrtholog
Ensembl Genes ENSMUSG00000039671 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000018050 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000085436 UniProtKB/TrEMBL
  ENSMUSP00000096683 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000104885 UniProtKB/TrEMBL
  ENSMUSP00000104889 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000104892 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000120631 UniProtKB/TrEMBL
  ENSMUSP00000120932 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000121363 UniProtKB/TrEMBL
  ENSMUSP00000128680 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000136211 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000018050 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000088113 UniProtKB/TrEMBL
  ENSMUST00000099084 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000109262 UniProtKB/TrEMBL
  ENSMUST00000109266 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000109269 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000136842 UniProtKB/TrEMBL
  ENSMUST00000144530 UniProtKB/TrEMBL
  ENSMUST00000153655 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000170272 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000177633 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.20.920.10 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro Bromodomain UniProtKB/TrEMBL
  Bromodomain-like_sf UniProtKB/TrEMBL
  DUF3544 UniProtKB/TrEMBL
  PRKCBP1_PHD UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
  RACK7_Bromo_dom UniProtKB/TrEMBL
  Zinc_finger_PHD-type_CS UniProtKB/TrEMBL
  ZMYND8/11_PWWP UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_MYND UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report mmu:228880 UniProtKB/TrEMBL
MGD MGI:1918025 ENTREZGENE
NCBI Gene 228880 ENTREZGENE
Pfam Bromodomain UniProtKB/TrEMBL
  DUF3544 UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
PhenoGen Zmynd8 PhenoGen
PRINTS BROMODOMAIN UniProtKB/TrEMBL
PROSITE BROMODOMAIN_2 UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
  ZF_MYND_1 UniProtKB/TrEMBL
  ZF_MYND_2 UniProtKB/TrEMBL
  ZF_PHD_1 UniProtKB/TrEMBL
  ZF_PHD_2 UniProtKB/TrEMBL
SMART BROMO UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
Superfamily-SCOP Bromodomain UniProtKB/TrEMBL
  FYVE_PHD_ZnF UniProtKB/TrEMBL
UniProt A2A479_MOUSE UniProtKB/TrEMBL
  A2A480_MOUSE UniProtKB/TrEMBL
  A2A481_MOUSE UniProtKB/TrEMBL
  A2A482 ENTREZGENE, UniProtKB/TrEMBL
  A2A483 ENTREZGENE, UniProtKB/TrEMBL
  A2A484 ENTREZGENE, UniProtKB/TrEMBL
  A2A485_MOUSE UniProtKB/TrEMBL
  A2A486_MOUSE UniProtKB/TrEMBL
  E9Q8D1 ENTREZGENE, UniProtKB/TrEMBL
  Q3U1M7 ENTREZGENE, UniProtKB/TrEMBL
  Q3UH28 ENTREZGENE, UniProtKB/TrEMBL
  Q3UTQ9_MOUSE UniProtKB/TrEMBL
  Q3V1I9 ENTREZGENE, UniProtKB/TrEMBL
  Q3V437_MOUSE UniProtKB/TrEMBL
  Q6P4S7_MOUSE UniProtKB/TrEMBL
  Q80XT8_MOUSE UniProtKB/TrEMBL
  Q80Y82 ENTREZGENE, UniProtKB/TrEMBL
  Q8CHB3_MOUSE UniProtKB/TrEMBL
  Q9D8D5_MOUSE UniProtKB/TrEMBL