Ppp1r9a (protein phosphatase 1, regulatory subunit 9A) - Rat Genome Database
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Gene: Ppp1r9a (protein phosphatase 1, regulatory subunit 9A) Mus musculus
Analyze
Symbol: Ppp1r9a
Name: protein phosphatase 1, regulatory subunit 9A
RGD ID: 1552999
MGI Page MGI
Description: Predicted to have several functions, including enzyme binding activity; ion channel binding activity; and protein C-terminus binding activity. Involved in actin filament organization; calcium-mediated signaling; and modulation of chemical synaptic transmission. Localizes to cortical actin cytoskeleton; dendritic spine; and filopodium. Is expressed in several structures, including brain; extraembryonic component; genitourinary system; hemolymphoid system gland; and skeletal muscle. Orthologous to human PPP1R9A (protein phosphatase 1 regulatory subunit 9A); INTERACTS WITH 1,1-dichloroethene; 1,2-dichloroethane; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2810430P21Rik; 4930518N04Rik; 5330407E15; A230094E16Rik; BB181831; mKIAA1222; N; neur; Neurabin I; neurabin-1; neurabin-I; neural tissue-specific F-actin binding protein; NRB
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3964,902,702 - 5,165,661 (+)NCBIGRCm39mm39
GRCm3864,902,872 - 5,165,661 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl64,902,917 - 5,165,661 (+)EnsemblGRCm38mm10GRCm38
MGSCv3764,853,320 - 5,115,661 (+)NCBIGRCm37mm9NCBIm37
MGSCv3664,853,320 - 5,115,661 (+)NCBImm8
Celera65,049,683 - 5,311,917 (+)NCBICelera
Cytogenetic Map6A1NCBI
cM Map61.86NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-(hydroxymethyl)cytosine  (EXP)
aflatoxin B2  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (ISO)
butanal  (ISO)
carbon nanotube  (EXP)
choline  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
ethanol  (EXP)
folic acid  (EXP)
gentamycin  (ISO)
hydralazine  (ISO)
L-methionine  (EXP)
latrunculin B  (ISO)
menadione  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methoxychlor  (ISO)
methylmercury chloride  (ISO)
N-acetyl-beta-D-glucosamine  (ISO)
N-acetyl-D-glucosamine  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
paclitaxel  (ISO)
panobinostat  (ISO)
paracetamol  (EXP)
phenobarbital  (EXP,ISO)
phenyl acetate  (ISO)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
quercetin  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sulforaphane  (EXP)
testosterone enanthate  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
valproic acid  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12016225   PMID:12477932   PMID:12520002   PMID:12840045   PMID:14610273   PMID:15016827   PMID:15996550  
PMID:16141072   PMID:16141073   PMID:16341224   PMID:16525025   PMID:16600521   PMID:16602821   PMID:17464283   PMID:17967808   PMID:18183288   PMID:18480470   PMID:18554416   PMID:18799693  
PMID:20124353   PMID:20168089   PMID:20686481   PMID:21247477   PMID:21267068   PMID:21677750   PMID:21873635   PMID:26244553   PMID:27507650   PMID:28671696   PMID:28700667   PMID:28706196  
PMID:29518331   PMID:29786422   PMID:30562941  


Genomics

Comparative Map Data
Ppp1r9a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3964,902,702 - 5,165,661 (+)NCBIGRCm39mm39
GRCm3864,902,872 - 5,165,661 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl64,902,917 - 5,165,661 (+)EnsemblGRCm38mm10GRCm38
MGSCv3764,853,320 - 5,115,661 (+)NCBIGRCm37mm9NCBIm37
MGSCv3664,853,320 - 5,115,661 (+)NCBImm8
Celera65,049,683 - 5,311,917 (+)NCBICelera
Cytogenetic Map6A1NCBI
cM Map61.86NCBI
PPP1R9A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl794,907,202 - 95,296,415 (+)EnsemblGRCh38hg38GRCh38
GRCh38794,907,202 - 95,296,415 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37794,536,949 - 94,925,727 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36794,374,885 - 94,763,663 (+)NCBINCBI36hg18NCBI36
Build 34794,185,142 - 94,567,392NCBI
Celera789,235,114 - 89,624,424 (+)NCBI
Cytogenetic Map7q21.3NCBI
HuRef789,144,178 - 89,532,759 (+)NCBIHuRef
CHM1_1794,466,972 - 94,855,738 (+)NCBICHM1_1
CRA_TCAGchr7v2793,865,965 - 94,254,723 (+)NCBI
Ppp1r9a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0429,976,485 - 30,247,371 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl429,978,739 - 30,241,911 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0429,856,082 - 30,154,334 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4429,654,468 - 29,928,476 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1429,695,157 - 29,966,996 (+)NCBI
Celera428,548,989 - 28,813,836 (+)NCBICelera
Cytogenetic Map4q13NCBI
Ppp1r9a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543211,608,382 - 11,886,044 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543211,607,269 - 11,891,568 (+)NCBIChiLan1.0ChiLan1.0
PPP1R9A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.17100,453,090 - 100,839,325 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7100,455,357 - 100,833,220 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0786,863,919 - 87,251,634 (+)NCBIMhudiblu_PPA_v0panPan3
PPP1R9A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1420,251,738 - 20,557,208 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11420,251,791 - 20,563,315 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ppp1r9a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365854,981,555 - 5,277,185 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP1R9A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl974,635,280 - 74,940,362 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1974,635,285 - 74,944,050 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2981,987,561 - 82,105,844 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PPP1R9A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2153,747,857 - 54,127,005 (-)Ensembl
ChlSab1.12153,744,202 - 54,129,709 (-)NCBI
Ppp1r9a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248131,587,567 - 1,951,620 (+)NCBI

Position Markers
BB181831  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3865,165,404 - 5,165,540UniSTSGRCm38
MGSCv3765,115,404 - 5,115,540UniSTSGRCm37
Celera65,311,660 - 5,311,796UniSTS
Cytogenetic Map6A1UniSTS
cM Map60.5UniSTS
Whitehead/MRC_RH638.15UniSTS
UniSTS:235381  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3865,121,132 - 5,121,330UniSTSGRCm38
MGSCv3765,071,132 - 5,071,330UniSTSGRCm37
Celera65,267,391 - 5,267,589UniSTS
Cytogenetic Map6A1UniSTS
cM Map60.5UniSTS
Ppp1r9a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3865,077,501 - 5,077,614UniSTSGRCm38
MGSCv3765,109,820 - 5,110,115UniSTSGRCm37
Celera65,223,433 - 5,223,546UniSTS
Cytogenetic Map6A1UniSTS
cM Map6 UniSTS
cM Map60.5UniSTS
Ppp1r9a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3865,159,820 - 5,160,115UniSTSGRCm38
MGSCv3765,109,820 - 5,110,115UniSTSGRCm37
Celera65,306,075 - 5,306,370UniSTS
Cytogenetic Map6A1UniSTS
cM Map6 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
14746985Manh59_mmandible shape 59 (mouse)6120847193Mouse
1357503Nhdlq5_mnon-HDL QTL 5 (mouse)Not determined6121465015Mouse
1301178Lith10_mlithogenic gene 10 (mouse)Not determined6121465015Mouse
10043884Bhr8_mbronchial hyperresponsiveness 8 (mouse)Not determined6121465015Mouse
10044000Mobq9_mmultigenetic obesity QTL 9 (mouse)Not determined6121465015Mouse
12904934Edlmmq4_mextensor digitorum longus muscle mass QTL 4 (mouse)6125514064Mouse
12904942Tammq3_mtibialis anterior muscle mass QTL 3 (mouse)6125514064Mouse
12904955Gmmq3_mgastrocnemius muscle mass QTL 3 (mouse)6125514064Mouse
1301131Chol2_mcholesterol 2 (mouse)Not determined6132144496Mouse
5491191Mobq2_mmultigenic obesity QTL 2 (mouse)Not determined6132144496Mouse
1302024Skull7_mskull morphology 7 (mouse)Not determined6132144496Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
15039372Nmrs22_mNAFLD-associated magnetic resonance shift 22 (mouse)6147633535476335Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
14700782Syncq6_msynovial calcification QTL 6 (mouse)641770005219000Mouse
1300731Smdq3_msegregation of mitochondrial DNA QTL 3 (mouse)Not determined6424920738249326Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
11353836Bmiq1_mbody mass index QTL 1 (mouse)6450382329751334Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345314181Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348726677Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348726677Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348726677Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5269
Count of miRNA genes:1033
Interacting mature miRNAs:1567
Transcripts:ENSMUST00000035813, ENSMUST00000065842, ENSMUST00000164110, ENSMUST00000168998, ENSMUST00000175889, ENSMUST00000175962, ENSMUST00000176136, ENSMUST00000176263, ENSMUST00000176729, ENSMUST00000177153, ENSMUST00000177338, ENSMUST00000177456
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001363809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_156747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB091828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC068500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC074225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY308065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000035813   ⟹   ENSMUSP00000046906
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,903,320 - 5,165,661 (+)Ensembl
RefSeq Acc Id: ENSMUST00000065842
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl65,113,459 - 5,116,508 (+)Ensembl
RefSeq Acc Id: ENSMUST00000164110
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,903,432 - 5,164,516 (+)Ensembl
RefSeq Acc Id: ENSMUST00000168998   ⟹   ENSMUSP00000126643
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,902,974 - 5,078,491 (+)Ensembl
RefSeq Acc Id: ENSMUST00000175889   ⟹   ENSMUSP00000135629
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,902,917 - 5,159,590 (+)Ensembl
RefSeq Acc Id: ENSMUST00000175962   ⟹   ENSMUSP00000135360
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,903,373 - 5,009,767 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176136
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl65,110,659 - 5,113,787 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176263   ⟹   ENSMUSP00000134937
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,903,018 - 5,160,221 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176729   ⟹   ENSMUSP00000134909
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,906,407 - 5,154,249 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177153   ⟹   ENSMUSP00000135485
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,905,416 - 5,159,809 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177338   ⟹   ENSMUSP00000135634
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,903,788 - 4,906,787 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177456   ⟹   ENSMUSP00000134943
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl64,905,416 - 5,159,817 (+)Ensembl
RefSeq Acc Id: NM_001363809   ⟹   NP_001350738
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,902,975 - 5,165,661 (+)NCBI
GRCm3864,902,975 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: NM_181595   ⟹   NP_853626
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,311 - 5,165,661 (+)NCBI
GRCm3864,903,311 - 5,165,661 (+)NCBI
MGSCv3764,853,320 - 5,115,661 (+)RGD
Celera65,049,683 - 5,311,917 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_156747
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,311 - 5,165,661 (+)NCBI
GRCm3864,903,311 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505070   ⟹   XP_006505133
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,165,661 (+)NCBI
GRCm3864,903,281 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505071   ⟹   XP_006505134
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,902,702 - 5,165,661 (+)NCBI
GRCm3864,902,872 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505072   ⟹   XP_006505135
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,486 - 5,165,661 (+)NCBI
GRCm3864,903,486 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505073   ⟹   XP_006505136
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,165,661 (+)NCBI
GRCm3864,903,280 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505075   ⟹   XP_006505138
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,165,661 (+)NCBI
GRCm3864,903,281 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505076   ⟹   XP_006505139
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,165,661 (+)NCBI
GRCm3864,903,281 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505078   ⟹   XP_006505141
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,165,661 (+)NCBI
GRCm3864,903,281 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505080   ⟹   XP_006505143
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,165,661 (+)NCBI
GRCm3864,903,282 - 5,165,661 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505082   ⟹   XP_006505145
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,133,427 (+)NCBI
GRCm3864,903,281 - 5,133,427 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321591   ⟹   XP_017177080
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,121,372 (+)NCBI
GRCm3864,903,281 - 5,133,427 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036166122   ⟹   XP_036022015
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,902,702 - 5,165,661 (+)NCBI
RefSeq Acc Id: XM_036166123   ⟹   XP_036022016
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,486 - 5,165,661 (+)NCBI
RefSeq Acc Id: XM_036166124   ⟹   XP_036022017
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,123 - 5,165,661 (+)NCBI
RefSeq Acc Id: XM_036166125   ⟹   XP_036022018
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,903,486 - 5,165,661 (+)NCBI
RefSeq Acc Id: XM_036166126   ⟹   XP_036022019
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,902,702 - 5,165,661 (+)NCBI
RefSeq Acc Id: XM_036166127   ⟹   XP_036022020
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3965,022,677 - 5,165,661 (+)NCBI
RefSeq Acc Id: XR_003956199
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,902,702 - 5,154,040 (+)NCBI
GRCm3864,902,872 - 5,154,040 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004942955
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3964,902,702 - 5,154,040 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001350738 (Get FASTA)   NCBI Sequence Viewer  
  NP_853626 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505133 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505134 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505135 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505136 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505138 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505139 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505141 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505143 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505145 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177080 (Get FASTA)   NCBI Sequence Viewer  
  XP_036022015 (Get FASTA)   NCBI Sequence Viewer  
  XP_036022016 (Get FASTA)   NCBI Sequence Viewer  
  XP_036022017 (Get FASTA)   NCBI Sequence Viewer  
  XP_036022018 (Get FASTA)   NCBI Sequence Viewer  
  XP_036022019 (Get FASTA)   NCBI Sequence Viewer  
  XP_036022020 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH48729 (Get FASTA)   NCBI Sequence Viewer  
  AAH53748 (Get FASTA)   NCBI Sequence Viewer  
  AAQ77229 (Get FASTA)   NCBI Sequence Viewer  
  BAC26944 (Get FASTA)   NCBI Sequence Viewer  
  BAC65754 (Get FASTA)   NCBI Sequence Viewer  
  BAC77245 (Get FASTA)   NCBI Sequence Viewer  
  BAE22449 (Get FASTA)   NCBI Sequence Viewer  
  BAE23620 (Get FASTA)   NCBI Sequence Viewer  
  EDL13974 (Get FASTA)   NCBI Sequence Viewer  
  EDL13975 (Get FASTA)   NCBI Sequence Viewer  
  EDL13976 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_853626   ⟸   NM_181595
- UniProtKB: Q7TN74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505134   ⟸   XM_006505071
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505133   ⟸   XM_006505070
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505136   ⟸   XM_006505073
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006505145   ⟸   XM_006505082
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006505141   ⟸   XM_006505078
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006505138   ⟸   XM_006505075
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006505139   ⟸   XM_006505076
- Peptide Label: isoform X4
- UniProtKB: H3BJD6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505143   ⟸   XM_006505080
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006505135   ⟸   XM_006505072
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017177080   ⟸   XM_017321591
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: NP_001350738   ⟸   NM_001363809
RefSeq Acc Id: ENSMUSP00000135485   ⟸   ENSMUST00000177153
RefSeq Acc Id: ENSMUSP00000135634   ⟸   ENSMUST00000177338
RefSeq Acc Id: ENSMUSP00000134943   ⟸   ENSMUST00000177456
RefSeq Acc Id: ENSMUSP00000126643   ⟸   ENSMUST00000168998
RefSeq Acc Id: ENSMUSP00000046906   ⟸   ENSMUST00000035813
RefSeq Acc Id: ENSMUSP00000134909   ⟸   ENSMUST00000176729
RefSeq Acc Id: ENSMUSP00000134937   ⟸   ENSMUST00000176263
RefSeq Acc Id: ENSMUSP00000135629   ⟸   ENSMUST00000175889
RefSeq Acc Id: ENSMUSP00000135360   ⟸   ENSMUST00000175962
RefSeq Acc Id: XP_036022015   ⟸   XM_036166122
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036022019   ⟸   XM_036166126
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036022017   ⟸   XM_036166124
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036022016   ⟸   XM_036166123
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036022018   ⟸   XM_036166125
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036022020   ⟸   XM_036166127
- Peptide Label: isoform X12
Protein Domains
PDZ   SAM

Promoters
RGD ID:6839712
Promoter ID:MM_KWN:45094
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell
Transcripts:NM_181595,   UC009AVX.1,   UC009AVZ.1,   UC009AWA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3664,852,886 - 4,853,677 (+)MPROMDB
RGD ID:6888942
Promoter ID:EPDNEW_M7922
Type:initiation region
Name:Ppp1r9a_1
Description:Mus musculus protein phosphatase 1, regulatory subunit 9A , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3864,902,994 - 4,903,054EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442401 AgrOrtholog
Ensembl Genes ENSMUSG00000032827 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000046906 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000126643 UniProtKB/TrEMBL
  ENSMUSP00000134909 UniProtKB/TrEMBL
  ENSMUSP00000134937 UniProtKB/TrEMBL
  ENSMUSP00000134943 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135360 UniProtKB/TrEMBL
  ENSMUSP00000135485 UniProtKB/TrEMBL
  ENSMUSP00000135629 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135634 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035813 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000164110 ENTREZGENE
  ENSMUST00000168998 UniProtKB/TrEMBL
  ENSMUST00000175889 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000175962 UniProtKB/TrEMBL
  ENSMUST00000176263 UniProtKB/TrEMBL
  ENSMUST00000176729 UniProtKB/TrEMBL
  ENSMUST00000177153 UniProtKB/TrEMBL
  ENSMUST00000177338 UniProtKB/TrEMBL
  ENSMUST00000177456 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  2.30.42.10 UniProtKB/TrEMBL
InterPro Neurabin-1 UniProtKB/TrEMBL
  Neurabin-1/2_PDZ UniProtKB/TrEMBL
  Neurabin-like UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM/pointed UniProtKB/TrEMBL
MGD MGI:2442401 ENTREZGENE
NCBI Gene 243725 ENTREZGENE
PANTHER PTHR16154 UniProtKB/TrEMBL
  PTHR16154:SF22 UniProtKB/TrEMBL
Pfam PDZ UniProtKB/TrEMBL
  PDZ_5 UniProtKB/TrEMBL
  SAM_2 UniProtKB/TrEMBL
PhenoGen Ppp1r9a PhenoGen
PROSITE PDZ UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/TrEMBL
SMART PDZ UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
Superfamily-SCOP PDZ UniProtKB/TrEMBL
  SAM_homology UniProtKB/TrEMBL
UniGene Mm.332901 ENTREZGENE
UniProt H3BJA6_MOUSE UniProtKB/TrEMBL
  H3BJD0_MOUSE UniProtKB/TrEMBL
  H3BJD6 ENTREZGENE, UniProtKB/TrEMBL
  H3BKE7_MOUSE UniProtKB/TrEMBL
  H3BKQ7_MOUSE UniProtKB/TrEMBL
  H3BL28_MOUSE UniProtKB/TrEMBL
  Q3UUK5_MOUSE UniProtKB/TrEMBL
  Q3UXW4_MOUSE UniProtKB/TrEMBL
  Q7TN74 ENTREZGENE, UniProtKB/TrEMBL
  Q7TSA7_MOUSE UniProtKB/TrEMBL
  Q80TH3_MOUSE UniProtKB/TrEMBL
  Q80ZL7_MOUSE UniProtKB/TrEMBL
  Q8BMP0_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-29 Ppp1r9a  protein phosphatase 1, regulatory subunit 9A    protein phosphatase 1, regulatory (inhibitor) subunit 9A  Symbol and/or name change 5135510 APPROVED