Rhob (ras homolog family member B) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Rhob (ras homolog family member B) Mus musculus
Analyze
Symbol: Rhob
Name: ras homolog family member B
RGD ID: 1552942
MGI Page MGI
Description: Enables GDP binding activity. Involved in several processes, including positive regulation of angiogenesis; positive regulation of apoptotic process; and regulation of modification of postsynaptic structure. Acts upstream of or within intracellular protein transport. Located in endosome; nucleus; and plasma membrane. Is active in Schaffer collateral - CA1 synapse. Is expressed in several structures, including blood; branchial arch; embryo ectoderm; heart; and nervous system. Orthologous to human RHOB (ras homolog family member B).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA017882; aplysia ras-related homolog B; Ar; Arh6; Arhb; MGC117867; ras homolog B; ras homolog gene family, member AB; ras homolog gene family, member B; rho-related GTP-binding protein RhoB
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39128,547,661 - 8,550,009 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl128,547,661 - 8,550,009 (-)EnsemblGRCm39 Ensembl
GRCm38128,497,661 - 8,500,009 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl128,497,661 - 8,500,009 (-)EnsemblGRCm38mm10GRCm38
MGSCv37128,504,564 - 8,506,791 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36128,523,766 - 8,525,993 (-)NCBIMGSCv36mm8
Celera128,887,131 - 8,889,358 (-)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map123.88NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(S)-(-)-perillyl alcohol  (ISO)
(S)-nicotine  (EXP)
1,2,4-trimethylbenzene  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
1,3,5-trinitro-1,3,5-triazinane  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-acetamidofluorene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP)
2-butoxyethanol  (EXP)
2-hydroxypropanoic acid  (ISO)
2-nitrofluorene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
5-azacytidine  (ISO)
8-Br-cAMP  (ISO)
9-cis-retinoic acid  (ISO)
acrylamide  (ISO)
actinomycin D  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucosamine  (EXP)
aldehydo-D-glucose  (EXP)
all-trans-4-oxoretinoic acid  (ISO)
all-trans-retinoic acid  (EXP,ISO)
all-trans-retinol  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (ISO)
atorvastatin calcium  (ISO)
belinostat  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
beta-D-glucosamine  (EXP)
bisphenol A  (EXP,ISO)
buspirone  (ISO)
butan-1-ol  (ISO)
cadmium dichloride  (EXP,ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
carveol  (ISO)
carvone  (ISO)
celecoxib  (ISO)
cetrorelix  (ISO)
chloropicrin  (ISO)
chloroquine  (ISO)
chlorpyrifos  (EXP)
chrysene  (EXP)
clofibrate  (EXP)
clozapine  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
curcumin  (ISO)
cycloheximide  (EXP)
cyclosporin A  (ISO)
D-glucose  (EXP)
deguelin  (ISO)
desogestrel  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (EXP,ISO)
diclofenac  (ISO)
diethylstilbestrol  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
fipronil  (ISO)
fluoranthene  (EXP)
fluvastatin  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
gallic acid  (ISO)
gentamycin  (ISO)
glucose  (EXP)
hexadecanoic acid  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
irinotecan  (ISO)
iron atom  (ISO)
iron dichloride  (ISO)
iron(0)  (ISO)
isobutanol  (ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
ketoconazole  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
lovastatin  (EXP,ISO)
manganese(II) chloride  (EXP)
mercury dibromide  (ISO)
methamphetamine  (EXP)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
methylmercury(1+)  (ISO)
methylparaben  (ISO)
methylseleninic acid  (ISO)
mevalonic acid  (ISO)
microcystin-LR  (EXP)
mifepristone  (ISO)
myrtenol  (ISO)
N-acetylsphingosine  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (ISO)
naphthalenes  (ISO)
nefazodone  (ISO)
nickel dichloride  (ISO)
nicotine  (EXP)
NSC 23766  (EXP)
ochratoxin A  (ISO)
oleic acid  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
p-menthan-3-ol  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perillic acid  (ISO)
perillyl alcohol  (ISO)
perillyl aldehyde  (ISO)
phenethyl caffeate  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
prothioconazole  (ISO)
rac-lactic acid  (ISO)
ranitidine  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
T-2 toxin  (ISO)
tamoxifen  (EXP)
temozolomide  (ISO)
terbinafine  (ISO)
testosterone  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP,ISO)
tetradecane  (ISO)
tetrahydropalmatine  (ISO)
tetraphene  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
torcetrapib  (ISO)
triadimefon  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (EXP,ISO)
trichostatin A  (ISO)
triclosan  (ISO)
Triptolide  (ISO)
troglitazone  (EXP,ISO)
undecane  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Rho GTPases in human breast tumours: expression and mutation analyses and correlation with clinical parameters. Fritz G, etal., Br J Cancer. 2002 Sep 9;87(6):635-44.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1400319   PMID:7559652   PMID:7888179   PMID:8543060   PMID:8662891   PMID:8831676   PMID:8939998   PMID:9438836   PMID:10349636   PMID:10464095   PMID:10559899   PMID:10906464  
PMID:10913192   PMID:11042159   PMID:11076861   PMID:11353846   PMID:11564874   PMID:11747086   PMID:11905808   PMID:12384510   PMID:12477932   PMID:12548020   PMID:13679852   PMID:14597666  
PMID:14647415   PMID:14660441   PMID:15093731   PMID:15102679   PMID:15151987   PMID:15169915   PMID:15489334   PMID:15543229   PMID:15548709   PMID:15572128   PMID:15691760   PMID:15748883  
PMID:15776002   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16247449   PMID:16385489   PMID:16919471   PMID:17198702   PMID:17397186   PMID:17623777   PMID:17653061   PMID:17692842  
PMID:17706596   PMID:17951322   PMID:18056259   PMID:18239436   PMID:18340357   PMID:18802007   PMID:18840672   PMID:19286565   PMID:19377048   PMID:19521500   PMID:19768111   PMID:19808661  
PMID:19828736   PMID:19956591   PMID:20203211   PMID:21224061   PMID:21267068   PMID:21344485   PMID:21347332   PMID:21645877   PMID:21865151   PMID:21873635   PMID:21999580   PMID:22098422  
PMID:22539766   PMID:22911573   PMID:22982107   PMID:23135917   PMID:23375831   PMID:23732113   PMID:23792460   PMID:24280686   PMID:24782506   PMID:24912678   PMID:25213860   PMID:25871848  
PMID:26388235   PMID:26759237   PMID:27023172   PMID:28739254   PMID:28881218   PMID:28882929   PMID:29059167   PMID:29088697   PMID:30206932   PMID:30536763   PMID:30689861   PMID:30747229  
PMID:31306658   PMID:32325033   PMID:33972537   PMID:34321999   PMID:34557203   PMID:35819450   PMID:38187761  


Genomics

Comparative Map Data
Rhob
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39128,547,661 - 8,550,009 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl128,547,661 - 8,550,009 (-)EnsemblGRCm39 Ensembl
GRCm38128,497,661 - 8,500,009 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl128,497,661 - 8,500,009 (-)EnsemblGRCm38mm10GRCm38
MGSCv37128,504,564 - 8,506,791 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36128,523,766 - 8,525,993 (-)NCBIMGSCv36mm8
Celera128,887,131 - 8,889,358 (-)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map123.88NCBI
RHOB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38220,447,074 - 20,449,440 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl220,447,074 - 20,449,440 (+)EnsemblGRCh38hg38GRCh38
GRCh37220,646,835 - 20,649,201 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36220,510,316 - 20,512,682 (+)NCBINCBI36Build 36hg18NCBI36
Build 34220,568,462 - 20,570,828NCBI
Celera220,509,553 - 20,511,920 (+)NCBICelera
Cytogenetic Map2p24.1NCBI
HuRef220,404,158 - 20,406,525 (+)NCBIHuRef
CHM1_1220,576,236 - 20,578,603 (+)NCBICHM1_1
T2T-CHM13v2.0220,480,717 - 20,483,084 (+)NCBIT2T-CHM13v2.0
Rhob
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8637,083,030 - 37,085,204 (-)NCBIGRCr8
mRatBN7.2631,363,752 - 31,365,926 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl631,363,548 - 31,366,108 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx631,655,817 - 31,657,991 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0631,971,666 - 31,973,840 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0631,446,281 - 31,448,455 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0633,689,127 - 33,691,301 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl633,689,127 - 33,691,301 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0643,472,691 - 43,474,865 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4632,052,333 - 32,054,507 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1632,055,314 - 32,057,457 (-)NCBI
Celera630,812,638 - 30,814,812 (-)NCBICelera
Cytogenetic Map6q14NCBI
Rhob
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554692,965,041 - 2,965,631 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554692,964,968 - 2,966,998 (+)NCBIChiLan1.0ChiLan1.0
RHOB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212106,078,948 - 106,081,350 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A106,082,920 - 106,085,315 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A20,433,576 - 20,435,986 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A20,548,853 - 20,551,243 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A20,549,254 - 20,549,844 (+)Ensemblpanpan1.1panPan2
RHOB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11715,438,744 - 15,439,793 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1715,439,143 - 15,441,136 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1715,403,411 - 15,404,475 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01715,590,936 - 15,592,006 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1715,590,936 - 15,592,006 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11715,444,980 - 15,446,038 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01715,451,597 - 15,452,660 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01715,483,858 - 15,484,931 (+)NCBIUU_Cfam_GSD_1.0
Rhob
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629259,849,358 - 59,851,760 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493649310,987,801 - 10,990,207 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RHOB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3117,773,405 - 117,777,574 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13117,773,400 - 117,777,569 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23125,747,271 - 125,747,861 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RHOB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11487,247,615 - 87,249,984 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1487,249,005 - 87,249,592 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604524,967,249 - 24,969,623 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rhob
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247383,115,946 - 3,116,536 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247383,115,840 - 3,117,719 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rhob
86 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:586
Count of miRNA genes:381
Interacting mature miRNAs:441
Transcripts:ENSMUST00000067384
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122418579Mouse
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122418579Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122418579Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122418579Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124662697Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124662697Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127920733Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127920733Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130433078Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12365000029749999Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
25394547Skmw75_mskeletal muscle weight 75, gastroc (mouse)12821257610451853Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse

Markers in Region
RH66820  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38128,499,059 - 8,499,180UniSTSGRCm38
MGSCv37128,505,865 - 8,505,986UniSTSGRCm37
Celera128,888,432 - 8,888,553UniSTS
Cytogenetic Map12A1.1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_007483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC166361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF481943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X99963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000067384   ⟹   ENSMUSP00000067013
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,547,661 - 8,550,009 (-)Ensembl
GRCm38.p6 Ensembl128,497,661 - 8,500,009 (-)Ensembl
RefSeq Acc Id: NM_007483   ⟹   NP_031509
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,547,661 - 8,550,009 (-)NCBI
GRCm38128,497,661 - 8,500,009 (-)NCBI
MGSCv37128,504,564 - 8,506,791 (-)RGD
Celera128,887,131 - 8,889,358 (-)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_031509   ⟸   NM_007483
- UniProtKB: P62746 (UniProtKB/Swiss-Prot),   Q4FJM5 (UniProtKB/TrEMBL),   Q3TIC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000067013   ⟸   ENSMUST00000067384

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62746-F1-model_v2 AlphaFold P62746 1-196 view protein structure

Promoters
RGD ID:8677884
Promoter ID:EPDNEW_M16973
Type:multiple initiation site
Name:Rhob_1
Description:Mus musculus ras homolog family member B , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38128,500,011 - 8,500,071EPDNEW
RGD ID:6823322
Promoter ID:MM_KWN:11126
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_007483
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36128,504,656 - 8,507,717 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107949 AgrOrtholog
Ensembl Genes ENSMUSG00000054364 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000067384 ENTREZGENE
  ENSMUST00000067384.6 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase_Rho UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11852 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:107949 ENTREZGENE
NCBI Gene 11852 ENTREZGENE
PANTHER PTHR24072 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHO-RELATED GTP-BINDING PROTEIN RHOB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ras UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rhob PhenoGen
PRINTS RASTRNSFRMNG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ARF UniProtKB/TrEMBL
  RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt P62746 ENTREZGENE
  Q3TIC2 ENTREZGENE, UniProtKB/TrEMBL
  Q4FJM5 ENTREZGENE, UniProtKB/TrEMBL
  RHOB_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary P01121 UniProtKB/Swiss-Prot
  Q9CUV7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-29 Rhob  ras homolog family member B    ras homolog gene family, member B  Symbol and/or name change 5135510 APPROVED