Fgf14 (fibroblast growth factor 14) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Fgf14 (fibroblast growth factor 14) Mus musculus
Analyze
Symbol: Fgf14
Name: fibroblast growth factor 14
RGD ID: 1552930
MGI Page MGI
Description: Predicted to enable growth factor activity; heparin binding activity; and sodium channel regulator activity. Acts upstream of or within several processes, including adult locomotory behavior; neuromuscular process; and positive regulation of sodium ion transport. Located in cytosol; nucleus; and synapse. Is expressed in several structures, including alimentary system; brain; cardiovascular system; respiratory system; and sensory organ. Used to study Alzheimer's disease; frontotemporal dementia; and spinocerebellar ataxia type 27. Human ortholog(s) of this gene implicated in autosomal dominant cerebellar ataxia. Orthologous to human FGF14 (fibroblast growth factor 14).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FGF-14; Fgf1b; FHF-4; Fhf4; fibroblast growth factor 14, isoform b; fibroblast growth factor 1b; fibroblast growth factor homologous factor 4; mFHF-4(1B); MGC129318; MGC129319; Tg(tetO-MAPT*P301L)4510Kha
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914124,211,257 - 124,915,098 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14124,215,319 - 124,914,539 (-)EnsemblGRCm39 Ensembl
GRCm3814123,974,441 - 124,677,686 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14123,977,907 - 124,677,127 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714124,377,513 - 125,076,349 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614123,113,087 - 123,860,355 (-)NCBIMGSCv36mm8
Celera14123,432,239 - 124,123,303 (-)NCBICelera
Cytogenetic Map14E5NCBI
cM Map1466.18NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA)
cytosol  (IDA)
nucleus  (IBA,IDA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal anxiety-related response  (IAGP)
abnormal channel response  (IAGP)
abnormal CNS synaptic transmission  (IAGP)
abnormal corticospinal tract morphology  (IAGP)
abnormal dentate gyrus morphology  (IAGP)
abnormal gait  (IAGP)
abnormal hippocampus CA1 region morphology  (IAGP)
abnormal kidney morphology  (IEA)
abnormal locomotor activation  (IAGP)
abnormal motor capabilities/coordination/movement  (IAGP)
abnormal nervous system electrophysiology  (IAGP)
abnormal nervous system physiology  (IAGP)
abnormal neuron morphology  (IAGP)
abnormal posture  (IAGP)
abnormal response to new environment  (IAGP)
abnormal skin morphology  (IEA)
abnormal spatial learning  (IAGP)
abnormal spatial reference memory  (IAGP)
abnormal spinal cord morphology  (IAGP)
abnormal spine curvature  (IEA)
abnormal spleen morphology  (IEA)
abnormal thyroid gland morphology  (IEA)
astrocytosis  (IAGP)
ataxia  (IAGP)
decreased anxiety-related response  (IAGP)
decreased body weight  (IAGP)
decreased brain weight  (IAGP)
decreased exploration in new environment  (IAGP)
decreased grip strength  (IAGP)
decreased hippocampus pyramidal cell number  (IAGP)
dystonia  (IAGP)
enlarged thyroid gland  (IEA)
forebrain atrophy  (IAGP)
hippocampal neuron degeneration  (IAGP)
hunched posture  (IAGP)
hyperactivity  (IAGP)
impaired balance  (IAGP)
impaired contextual conditioning behavior  (IAGP)
impaired coordination  (IAGP)
impaired cued conditioning behavior  (IAGP)
impaired spatial learning  (IAGP)
impaired swimming  (IAGP)
increased anxiety-related response  (IAGP)
increased circulating alkaline phosphatase level  (IEA)
increased exploration in new environment  (IAGP)
increased locomotor activity  (IAGP)
increased susceptibility to pharmacologically induced seizures  (IAGP)
kyphosis  (IEA)
limb grasping  (IAGP)
neurofibrillary tangles  (IAGP)
neuron degeneration  (IAGP)
preweaning lethality, incomplete penetrance  (IEA)
reduced long-term potentiation  (IAGP)
tau protein deposits  (IAGP)
weakness  (IAGP)
weight loss  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Structure and expression of a novel isoform of mouse FGF homologous factor (FHF)-4. Yamamoto S, etal., Biochim Biophys Acta 1998 May 29;1398(1):38-41.
Additional References at PubMed
PMID:8790420   PMID:10349636   PMID:10640713   PMID:10644718   PMID:10786625   PMID:11042159   PMID:11076861   PMID:11165488   PMID:11217851   PMID:11900978   PMID:12123606   PMID:12477932  
PMID:12666204   PMID:14517998   PMID:14681479   PMID:16020737   PMID:16123981   PMID:16141072   PMID:16141073   PMID:16291936   PMID:16651626   PMID:17208450   PMID:17236779   PMID:17678857  
PMID:17953485   PMID:18287559   PMID:18930825   PMID:19074615   PMID:19427061   PMID:19665462   PMID:19906978   PMID:20040496   PMID:20357768   PMID:21172610   PMID:21339379   PMID:21854751  
PMID:21873635   PMID:21876757   PMID:21886788   PMID:22027994   PMID:22312444   PMID:22365544   PMID:22682244   PMID:22687952   PMID:22699908   PMID:22836259   PMID:22855807   PMID:22920254  
PMID:22941973   PMID:23029293   PMID:23332170   PMID:23640885   PMID:23719816   PMID:23774650   PMID:23805379   PMID:23831029   PMID:23891806   PMID:23946388   PMID:23962722   PMID:24198358  
PMID:24278327   PMID:24362760   PMID:24368848   PMID:24411290   PMID:24428919   PMID:24462887   PMID:24489906   PMID:24503275   PMID:24631720   PMID:24952961   PMID:25051234   PMID:25053427  
PMID:25069841   PMID:25093726   PMID:25108040   PMID:25151619   PMID:25269146   PMID:25270074   PMID:25319522   PMID:25704951   PMID:25926453   PMID:25933020   PMID:26001565   PMID:26019329  
PMID:26048366   PMID:26089778   PMID:26146790   PMID:26365177   PMID:26458742   PMID:26508157   PMID:26538322   PMID:26538654   PMID:26610388   PMID:26687232   PMID:26692334   PMID:26748348  
PMID:26758825   PMID:26758828   PMID:26917740   PMID:26923415   PMID:26931567   PMID:26949217   PMID:27030011   PMID:27041503   PMID:27044086   PMID:27163207   PMID:27254664   PMID:27318134  
PMID:27629715   PMID:27666389   PMID:27723722   PMID:28111080   PMID:28112682   PMID:28355559   PMID:28408124   PMID:28411086   PMID:28461004   PMID:28461218   PMID:28500862   PMID:28500878  
PMID:28654636   PMID:28655349   PMID:28678786   PMID:28760828   PMID:28827321   PMID:28860088   PMID:28869476   PMID:29044200   PMID:29163005   PMID:29358399   PMID:29624602   PMID:29776378  
PMID:29915328   PMID:30049665   PMID:30068389   PMID:30108137   PMID:30126037   PMID:30189209   PMID:30290707   PMID:30521594   PMID:30524268   PMID:30559469   PMID:30559471   PMID:30571694  
PMID:30594669   PMID:30616676   PMID:30659012   PMID:30733665   PMID:30874605   PMID:31053641   PMID:31171783   PMID:31268600   PMID:31558566   PMID:31982202   PMID:32049030   PMID:32170006  
PMID:32508844   PMID:32599005   PMID:32623260   PMID:32659913   PMID:32776088   PMID:32778793   PMID:32814048   PMID:32922260   PMID:32991997   PMID:33000527   PMID:33106420   PMID:33125873  
PMID:33242304   PMID:33402227   PMID:33555315   PMID:33651884   PMID:33848474   PMID:33894222   PMID:33953293   PMID:34039738   PMID:34131105   PMID:34321999   PMID:34551296   PMID:34815492  
PMID:35020897   PMID:35055033   PMID:35128032   PMID:35273086   PMID:35513476   PMID:35613261   PMID:36274955   PMID:36759256   PMID:36843263   PMID:37105172   PMID:37192625   PMID:37716378  
PMID:37900942   PMID:38052272   PMID:38115011   PMID:38542311  


Genomics

Comparative Map Data
Fgf14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914124,211,257 - 124,915,098 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14124,215,319 - 124,914,539 (-)EnsemblGRCm39 Ensembl
GRCm3814123,974,441 - 124,677,686 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14123,977,907 - 124,677,127 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714124,377,513 - 125,076,349 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614123,113,087 - 123,860,355 (-)NCBIMGSCv36mm8
Celera14123,432,239 - 124,123,303 (-)NCBICelera
Cytogenetic Map14E5NCBI
cM Map1466.18NCBI
FGF14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813101,710,804 - 102,402,443 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13101,710,804 - 102,402,457 (-)EnsemblGRCh38hg38GRCh38
GRCh3713102,363,154 - 103,054,793 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3613101,173,036 - 101,852,125 (-)NCBINCBI36Build 36hg18NCBI36
Build 3413101,173,035 - 101,852,125NCBI
Celera1383,216,004 - 83,896,590 (-)NCBICelera
Cytogenetic Map13q33.1NCBI
HuRef1382,966,637 - 83,646,527 (-)NCBIHuRef
CHM1_113102,343,273 - 103,023,626 (-)NCBICHM1_1
T2T-CHM13v2.013100,926,801 - 101,618,453 (-)NCBIT2T-CHM13v2.0
Fgf14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr815107,442,800 - 108,086,486 (-)NCBIGRCr8
mRatBN7.215101,045,033 - 101,679,888 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl15101,045,036 - 101,679,900 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx15105,001,581 - 105,221,213 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.015106,090,629 - 106,309,568 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.015103,017,877 - 103,236,826 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.015110,382,274 - 111,077,027 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl15110,385,217 - 110,612,681 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.015113,762,507 - 114,450,890 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.415109,057,275 - 109,297,945 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.115109,073,054 - 109,313,725 (-)NCBI
Celera1599,789,847 - 100,014,689 (-)NCBICelera
Cytogenetic Map15q25NCBI
Fgf14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554048,705,112 - 9,325,117 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554048,704,344 - 9,329,917 (+)NCBIChiLan1.0ChiLan1.0
FGF14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v214103,226,462 - 103,919,983 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan113101,893,411 - 102,587,258 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01382,869,491 - 83,563,099 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113102,013,549 - 102,697,116 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13102,016,568 - 102,696,330 (-)Ensemblpanpan1.1panPan2
FGF14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12251,379,799 - 51,983,662 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2251,380,788 - 51,982,849 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2251,160,800 - 51,763,369 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02251,830,679 - 52,434,436 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2251,830,715 - 52,433,639 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12251,482,297 - 52,083,953 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02251,490,701 - 52,099,973 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02251,538,733 - 52,140,689 (-)NCBIUU_Cfam_GSD_1.0
Fgf14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945186,718,451 - 187,350,642 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364728,602,365 - 9,227,600 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364728,601,968 - 9,233,704 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGF14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1170,251,446 - 70,422,192 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11170,251,374 - 70,861,941 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21177,550,629 - 77,720,414 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FGF14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1380,304,996 - 80,978,292 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl380,309,110 - 80,500,510 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604636,809,470 - 37,514,918 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fgf14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247939,021,579 - 9,638,740 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247939,021,538 - 9,641,651 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fgf14
12613 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1025
Count of miRNA genes:396
Interacting mature miRNAs:436
Transcripts:ENSMUST00000026631, ENSMUST00000095529
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
10755523Hgb2_mhemoglobin 2 (mouse)14105884654125139656Mouse

Markers in Region
Fgf14  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map14E5UniSTS
cM Map1459.0UniSTS
cM Map1459.0UniSTS
RH126827  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3814124,498,042 - 124,498,246UniSTSGRCm38
GRCm382127,800,331 - 127,800,535UniSTSGRCm38
MGSCv3714124,897,264 - 124,897,468UniSTSGRCm37
MGSCv372127,626,067 - 127,626,271UniSTSGRCm37
Celera2129,026,550 - 129,026,754UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map2F1UniSTS
cM Map273.0UniSTS
cM Map1459.0UniSTS
Whitehead/MRC_RH21588.23UniSTS
Fgf14  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map14E5UniSTS
cM Map1459.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_207667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006518549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB008907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB029498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC107231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC161001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC164978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02096940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF199607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT868740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LR130349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U66204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000026631   ⟹   ENSMUSP00000026631
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14124,215,703 - 124,430,314 (-)Ensembl
GRCm38.p6 Ensembl14123,978,291 - 124,192,902 (-)Ensembl
RefSeq Acc Id: ENSMUST00000095529   ⟹   ENSMUSP00000093185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14124,215,319 - 124,914,539 (-)Ensembl
GRCm38.p6 Ensembl14123,977,907 - 124,677,127 (-)Ensembl
RefSeq Acc Id: NM_010201   ⟹   NP_034331
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914124,211,257 - 124,430,006 (-)NCBI
GRCm3814123,978,291 - 124,192,546 (-)NCBI
MGSCv3714124,377,513 - 125,076,349 (-)RGD
Celera14123,432,239 - 124,123,303 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_207667   ⟹   NP_997550
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914124,211,257 - 124,914,936 (-)NCBI
GRCm3814123,978,291 - 124,677,127 (-)NCBI
MGSCv3714124,377,513 - 125,076,349 (-)RGD
Celera14123,432,239 - 124,123,303 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006518549   ⟹   XP_006518612
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914124,359,329 - 124,915,098 (-)NCBI
GRCm3814124,129,747 - 124,677,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011244952   ⟹   XP_011243254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914124,211,853 - 124,914,564 (-)NCBI
GRCm3814123,974,441 - 124,677,142 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017315845   ⟹   XP_017171334
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914124,211,853 - 124,915,098 (-)NCBI
GRCm3814123,974,441 - 124,677,686 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_997550   ⟸   NM_207667
- Peptide Label: isoform b
- UniProtKB: O89096 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_034331   ⟸   NM_010201
- Peptide Label: isoform a
- UniProtKB: Q9JHL9 (UniProtKB/Swiss-Prot),   Q8BST0 (UniProtKB/Swiss-Prot),   Q3KNZ6 (UniProtKB/Swiss-Prot),   P70379 (UniProtKB/Swiss-Prot),   A0A0R4J063 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006518612   ⟸   XM_006518549
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011243254   ⟸   XM_011244952
- Peptide Label: isoform X2
- UniProtKB: P70379 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017171334   ⟸   XM_017315845
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000026631   ⟸   ENSMUST00000026631
RefSeq Acc Id: ENSMUSP00000093185   ⟸   ENSMUST00000095529

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P70379-F1-model_v2 AlphaFold P70379 1-247 view protein structure

Promoters
RGD ID:8683294
Promoter ID:EPDNEW_M19677
Type:single initiation site
Name:Fgf14_3
Description:Mus musculus fibroblast growth factor 14 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19678  EPDNEW_M19679  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814124,146,741 - 124,146,801EPDNEW
RGD ID:8683296
Promoter ID:EPDNEW_M19678
Type:initiation region
Name:Fgf14_2
Description:Mus musculus fibroblast growth factor 14 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19677  EPDNEW_M19679  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814124,192,536 - 124,192,596EPDNEW
RGD ID:6824935
Promoter ID:MM_KWN:17899
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:UC007VBV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3614124,592,171 - 124,592,671 (-)MPROMDB
RGD ID:8683298
Promoter ID:EPDNEW_M19679
Type:single initiation site
Name:Fgf14_1
Description:Mus musculus fibroblast growth factor 14 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19677  EPDNEW_M19678  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814124,677,092 - 124,677,152EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109189 AgrOrtholog
Ensembl Genes ENSMUSG00000025551 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000026631 ENTREZGENE
  ENSMUST00000026631.6 UniProtKB/TrEMBL
  ENSMUST00000095529 ENTREZGENE
  ENSMUST00000095529.10 UniProtKB/TrEMBL
Gene3D-CATH 2.80.10.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fibroblast_GF_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IL1/FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14169 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:109189 ENTREZGENE
NCBI Gene 14169 ENTREZGENE
PANTHER PTHR11486 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11486:SF18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fgf14 PhenoGen
PRINTS HBGFFGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IL1HBGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HBGF_FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50353 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J063 ENTREZGENE, UniProtKB/TrEMBL
  FGF14_MOUSE UniProtKB/Swiss-Prot
  O89096 ENTREZGENE, UniProtKB/TrEMBL
  P70379 ENTREZGENE
  Q3KNZ6 ENTREZGENE
  Q8BST0 ENTREZGENE
  Q9JHL9 ENTREZGENE
  Q9JLA6_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3KNZ6 UniProtKB/Swiss-Prot
  Q8BST0 UniProtKB/Swiss-Prot
  Q9JHL9 UniProtKB/Swiss-Prot