Dnaja1 (DnaJ heat shock protein family (Hsp40) member A1) - Rat Genome Database

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Gene: Dnaja1 (DnaJ heat shock protein family (Hsp40) member A1) Mus musculus
Analyze
Symbol: Dnaja1
Name: DnaJ heat shock protein family (Hsp40) member A1
RGD ID: 1552918
MGI Page MGI
Description: Predicted to enable several functions, including C3HC4-type RING finger domain binding activity; Hsp70 protein binding activity; and signaling receptor binding activity. Acts upstream of or within androgen receptor signaling pathway; flagellated sperm motility; and spermatogenesis. Predicted to be located in membrane and microtubule cytoskeleton. Predicted to be active in cytosol. Is expressed in several structures, including 1st branchial arch mandibular component; alimentary system; brain; genitourinary system; and hemolymphoid system. Orthologous to human DNAJA1 (DnaJ heat shock protein family (Hsp40) member A1).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DnaJ (Hsp40) homolog, subfamily A, member 1; dnaJ homolog subfamily A member 1; dnaJ protein homolog 2; heat shock 40 kDa protein 4; heat shock protein J2; heat shock protein, Dnaj-like 2; Hsj; HSJ-2; Hsj2; Nedd; Nedd7; neural precursor cell expressed, developmentally down-regulated gene 7
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Dnaja1-ps   Gm15542   Gm18895   Gm18907   Gm18912   Gm18932   Gm20951   Gm3418   Gm6335   Gm6806   Gm7816  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39440,722,468 - 40,734,965 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl440,722,150 - 40,737,149 (+)EnsemblGRCm39 Ensembl
GRCm38440,722,468 - 40,734,965 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl440,722,150 - 40,737,149 (+)EnsemblGRCm38mm10GRCm38
MGSCv37440,669,501 - 40,684,186 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36440,911,204 - 40,923,635 (+)NCBIMGSCv36mm8
Celera440,382,728 - 40,397,413 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map420.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(S)-nicotine  (EXP)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,6-dinitrotoluene  (ISO)
2-butoxyethanol  (EXP)
2-methylcholine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
9-cis-retinoic acid  (ISO)
acetamide  (ISO)
aconitine  (ISO)
acrylamide  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
amphibole asbestos  (ISO)
arecoline  (ISO)
arsenous acid  (EXP,ISO)
Aurin  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
Benzo[ghi]perylene  (EXP)
Benzo[k]fluoranthene  (EXP)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (EXP,ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (ISO)
celastrol  (ISO)
chloropicrin  (ISO)
chrysene  (EXP)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
clofibric acid  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP,ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
deoxynivalenol  (EXP,ISO)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (EXP,ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
dioxygen  (ISO)
disulfiram  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP)
flutamide  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (EXP)
gedunin  (ISO)
gentamycin  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
Indeno[1,2,3-cd]pyrene  (EXP)
indometacin  (ISO)
isobutanol  (ISO)
ivermectin  (ISO)
kojic acid  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methotrexate  (EXP)
methylparaben  (ISO)
monocrotaline  (EXP)
monosodium L-glutamate  (EXP)
N-methylformamide  (EXP)
N-nitrosodiethylamine  (ISO)
nefazodone  (ISO)
niclosamide  (ISO)
nicotine  (EXP)
organoselenium compound  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
pentachlorophenol  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phenytoin  (EXP)
pirinixic acid  (EXP)
piroxicam  (ISO)
potassium dichromate  (ISO)
pravastatin  (ISO)
procymidone  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
raloxifene  (ISO)
resveratrol  (EXP)
rifampicin  (EXP)
rotenone  (ISO)
sarin  (ISO)
SCH 23390  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
silver(1+) nitrate  (ISO)
sodium arsenite  (EXP,ISO)
succimer  (EXP)
tetrachloromethane  (EXP)
tetraphene  (EXP)
thapsigargin  (ISO)
thiostrepton  (ISO)
titanium dioxide  (EXP,ISO)
trichloroethene  (EXP,ISO)
triptonide  (EXP)
troglitazone  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc pyrithione  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1378265   PMID:8889548   PMID:9192730   PMID:9382858   PMID:9799614   PMID:10349636   PMID:10816573   PMID:10922068   PMID:10942430   PMID:11042159   PMID:11076861   PMID:11147971  
PMID:11217851   PMID:11461004   PMID:11550087   PMID:11809754   PMID:12182889   PMID:12477932   PMID:12495215   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14691545   PMID:14752510  
PMID:15047721   PMID:15082773   PMID:15379887   PMID:15639784   PMID:15660130   PMID:15661747   PMID:15747579   PMID:16141072   PMID:16141073   PMID:17967808   PMID:19171884   PMID:20362542  
PMID:20363747   PMID:21565611   PMID:21589869   PMID:21873635   PMID:22083510   PMID:22085931   PMID:23716698   PMID:23892456   PMID:24194600   PMID:26147758   PMID:26206133   PMID:27034005  
PMID:27626380   PMID:28378742   PMID:28671696   PMID:29459677   PMID:29518331   PMID:30068389   PMID:30196744   PMID:30409884   PMID:30457570   PMID:31397499   PMID:32325033   PMID:33208462  
PMID:33972400   PMID:36030824   PMID:36108743   PMID:36114006   PMID:36417873  


Genomics

Comparative Map Data
Dnaja1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39440,722,468 - 40,734,965 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl440,722,150 - 40,737,149 (+)EnsemblGRCm39 Ensembl
GRCm38440,722,468 - 40,734,965 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl440,722,150 - 40,737,149 (+)EnsemblGRCm38mm10GRCm38
MGSCv37440,669,501 - 40,684,186 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36440,911,204 - 40,923,635 (+)NCBIMGSCv36mm8
Celera440,382,728 - 40,397,413 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map420.46NCBI
DNAJA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38933,025,273 - 33,039,907 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl933,025,273 - 33,039,907 (+)EnsemblGRCh38hg38GRCh38
GRCh37933,025,271 - 33,039,905 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36933,015,209 - 33,029,062 (+)NCBINCBI36Build 36hg18NCBI36
Build 34933,015,208 - 33,029,062NCBI
Celera932,956,506 - 32,970,354 (+)NCBICelera
Cytogenetic Map9p21.1NCBI
HuRef932,983,591 - 32,997,444 (+)NCBIHuRef
CHM1_1933,024,975 - 33,038,828 (+)NCBICHM1_1
T2T-CHM13v2.0933,041,834 - 33,056,468 (+)NCBIT2T-CHM13v2.0
Dnaja1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8560,638,404 - 60,649,315 (+)NCBIGRCr8
mRatBN7.2555,842,414 - 55,853,326 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl555,842,426 - 55,853,967 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx557,808,082 - 57,819,013 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0559,627,243 - 59,638,175 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0559,621,333 - 59,632,246 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0557,028,467 - 57,039,378 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl557,028,467 - 57,039,378 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0561,562,288 - 61,573,851 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4558,100,794 - 58,111,705 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1558,100,972 - 58,111,884 (+)NCBI
Celera554,454,606 - 54,465,517 (+)NCBICelera
Cytogenetic Map5q22NCBI
Dnaja1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554722,604,002 - 2,618,033 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554722,604,002 - 2,618,033 (-)NCBIChiLan1.0ChiLan1.0
DNAJA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21191,567,747 - 91,582,267 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1991,573,939 - 91,588,209 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0932,800,077 - 32,814,745 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1933,608,502 - 33,622,275 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl933,608,502 - 33,622,275 (+)Ensemblpanpan1.1panPan2
DNAJA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11150,156,089 - 50,168,379 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1150,156,089 - 50,167,536 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.01721,302,373 - 21,303,842 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1768,911,054 - 68,912,003 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02025,645,023 - 25,646,492 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02629,882,770 - 29,884,243 (-)NCBIUU_Cfam_GSD_1.0
Dnaja1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947165,052,278 - 165,063,722 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365241,599,913 - 1,610,682 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365241,599,883 - 1,611,302 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1033,432,844 - 33,445,532 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11033,432,529 - 33,445,556 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21037,687,721 - 37,699,598 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAJA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11247,220,976 - 47,235,684 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603844,122,907 - 44,137,626 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnaja1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473637,780,867 - 37,793,594 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473637,780,852 - 37,793,594 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dnaja1
319 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2236
Count of miRNA genes:790
Interacting mature miRNAs:1036
Transcripts:ENSMUST00000030118, ENSMUST00000125442, ENSMUST00000126020, ENSMUST00000129204, ENSMUST00000137246, ENSMUST00000137476, ENSMUST00000139406, ENSMUST00000148976, ENSMUST00000149794, ENSMUST00000164233
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse
10401115Pgia35_mproteoglycan induced arthritis 35 (mouse)Not determined41256237746562509Mouse
12880405Jcdq1_mjoint cartilage degeneration QTL 1 (mouse)41256237746562509Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
1301203Alcp8_malcohol preference locus 8 (mouse)Not determined41739516051395290Mouse
1301237Alcp7_malcohol preference locus 7 (mouse)Not determined41739516051395290Mouse
4141555Nbwa2_mNZB and NZW autoimmunity 2 (mouse)Not determined41789251551892635Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
25440481Moaq1_mmodifier of alien QTL 1 (mouse)41950000046000000Mouse
1302058Hrtfm3_mheart failure modifier 3 (mouse)Not determined42211194456112145Mouse
1300769Pcyts2_mplasmacytoma susceptibility 2 (mouse)Not determined42211194456112145Mouse
1301437Scon1_msucrose consumption 1 (mouse)Not determined42237344856373612Mouse
1302075Bdln6_mbody length 6 (mouse)Not determined42237344856373612Mouse
1301697Sluc18_msusceptibility to lung cancer 18 (mouse)Not determined42237344856373612Mouse
1302184Aaom1_mautoimmune aoritis in MRL mice 1 (mouse)Not determined42432229946332776Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
4142290Ssrq9_mstress response QTL 9 (mouse)Not determined3439516046332776Mouse
1301792Hdlq10_mHDL QTL 10 (mouse)Not determined43585970769859853Mouse
1300977Mopkd1_mmodifier of polycystic kidney disease progression 1 (mouse)Not determined43655083970550967Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
1302116Bbaa1_mB.burgdorferi-associated arthritis 1 (mouse)Not determined43825093072251078Mouse
10412178Habiir2_mhyperoxic acute lung injury imprinted region 2 (mouse)Not determined43945212663283678Mouse

Markers in Region
BB283300  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38440,729,910 - 40,730,019UniSTSGRCm38
MGSCv37440,676,943 - 40,677,052UniSTSGRCm37
Celera440,390,170 - 40,390,279UniSTS
Cytogenetic Map4A5UniSTS
Whitehead/MRC_RH4640.91UniSTS
RH126529  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38440,733,549 - 40,733,788UniSTSGRCm38
GRCm38X112,170,419 - 112,170,658UniSTSGRCm38
MGSCv37440,680,582 - 40,680,821UniSTSGRCm37
MGSCv37X109,284,028 - 109,284,267UniSTSGRCm37
Celera440,393,809 - 40,394,048UniSTS
CeleraX98,824,658 - 98,824,897UniSTS
Cytogenetic MapXE1UniSTS
Cytogenetic Map4A5UniSTS
AW556129  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38440,736,690 - 40,736,777UniSTSGRCm38
MGSCv37440,683,723 - 40,683,810UniSTSGRCm37
Celera440,396,950 - 40,397,037UniSTS
Cytogenetic Map4A5UniSTS
Whitehead/MRC_RH4648.74UniSTS
Dnaja1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387140,890,831 - 140,892,132UniSTSGRCm38
MGSCv377148,076,730 - 148,078,031UniSTSGRCm37
Celera7140,683,118 - 140,684,419UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map4A5UniSTS
cM Map521.0UniSTS
cM Map4 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001164671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001164672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB183426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF055664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI852330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL833775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB574002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC158024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP766105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY245852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK617936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN669546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D10917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000030118   ⟹   ENSMUSP00000030118
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,722,480 - 40,734,964 (+)Ensembl
GRCm38.p6 Ensembl440,722,480 - 40,734,964 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125442   ⟹   ENSMUSP00000116601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,722,945 - 40,728,164 (+)Ensembl
GRCm38.p6 Ensembl440,722,945 - 40,728,164 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126020
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,723,362 - 40,724,111 (+)Ensembl
GRCm38.p6 Ensembl440,723,362 - 40,724,111 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129204
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,722,922 - 40,733,900 (+)Ensembl
GRCm38.p6 Ensembl440,722,922 - 40,733,900 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137246   ⟹   ENSMUSP00000118294
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,722,930 - 40,731,759 (+)Ensembl
GRCm38.p6 Ensembl440,722,930 - 40,731,759 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137476
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,722,559 - 40,730,193 (+)Ensembl
GRCm38.p6 Ensembl440,722,559 - 40,730,193 (+)Ensembl
RefSeq Acc Id: ENSMUST00000139406
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,722,150 - 40,723,795 (+)Ensembl
GRCm38.p6 Ensembl440,722,150 - 40,723,795 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148976
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,724,049 - 40,732,263 (+)Ensembl
GRCm38.p6 Ensembl440,724,049 - 40,732,263 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149794   ⟹   ENSMUSP00000121461
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,723,117 - 40,726,180 (+)Ensembl
GRCm38.p6 Ensembl440,723,117 - 40,726,180 (+)Ensembl
RefSeq Acc Id: ENSMUST00000164233   ⟹   ENSMUSP00000129730
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl440,722,922 - 40,737,149 (+)Ensembl
GRCm38.p6 Ensembl440,722,922 - 40,737,149 (+)Ensembl
RefSeq Acc Id: NM_001164671   ⟹   NP_001158143
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39440,722,922 - 40,734,965 (+)NCBI
GRCm38440,722,922 - 40,734,965 (+)NCBI
MGSCv37440,669,501 - 40,684,186 (+)RGD
Celera440,382,728 - 40,397,413 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001164672   ⟹   NP_001158144
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39440,722,930 - 40,734,965 (+)NCBI
GRCm38440,722,930 - 40,734,965 (+)NCBI
MGSCv37440,669,501 - 40,684,186 (+)RGD
Celera440,382,728 - 40,397,413 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_008298   ⟹   NP_032324
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39440,722,468 - 40,734,965 (+)NCBI
GRCm38440,722,468 - 40,734,965 (+)NCBI
MGSCv37440,669,501 - 40,684,186 (+)RGD
Celera440,382,728 - 40,397,413 (+)RGD
cM Map4 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_032324   ⟸   NM_008298
- UniProtKB: P54102 (UniProtKB/Swiss-Prot),   P63037 (UniProtKB/Swiss-Prot),   Q5NTY0 (UniProtKB/TrEMBL),   Q3TK61 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001158143   ⟸   NM_001164671
- UniProtKB: P54102 (UniProtKB/Swiss-Prot),   P63037 (UniProtKB/Swiss-Prot),   Q5NTY0 (UniProtKB/TrEMBL),   Q3TK61 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001158144   ⟸   NM_001164672
- UniProtKB: P54102 (UniProtKB/Swiss-Prot),   P63037 (UniProtKB/Swiss-Prot),   Q5NTY0 (UniProtKB/TrEMBL),   Q3TK61 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000116601   ⟸   ENSMUST00000125442
RefSeq Acc Id: ENSMUSP00000129730   ⟸   ENSMUST00000164233
RefSeq Acc Id: ENSMUSP00000121461   ⟸   ENSMUST00000149794
RefSeq Acc Id: ENSMUSP00000118294   ⟸   ENSMUST00000137246
RefSeq Acc Id: ENSMUSP00000030118   ⟸   ENSMUST00000030118
Protein Domains
CR-type   J

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P63037-F1-model_v2 AlphaFold P63037 1-397 view protein structure

Promoters
RGD ID:6835170
Promoter ID:MM_KWN:37118
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Liver,   MEF_B4,   MEF_B6
Transcripts:NM_001164671,   NM_001164672,   NM_008298,   NR_029594,   OTTMUST00000015001,   OTTMUST00000015002,   OTTMUST00000015003,   OTTMUST00000015004,   OTTMUST00000015005,   OTTMUST00000015006,   OTTMUST00000015007,   OTTMUST00000015008
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36440,669,196 - 40,671,017 (+)MPROMDB
RGD ID:6847800
Promoter ID:MM_ACW:34230
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:DNAJA1.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36440,670,971 - 40,671,471 (+)MPROMDB
RGD ID:6883054
Promoter ID:EPDNEW_M4978
Type:initiation region
Name:Dnaja1_1
Description:Mus musculus DnaJ heat shock protein family member A1 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4980  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38440,722,533 - 40,722,593EPDNEW
RGD ID:6883058
Promoter ID:EPDNEW_M4980
Type:initiation region
Name:Dnaja1_2
Description:Mus musculus DnaJ heat shock protein family member A1 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4978  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38440,722,928 - 40,722,988EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1270129 AgrOrtholog
Ensembl Genes ENSMUSG00000028410 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030118 ENTREZGENE
  ENSMUST00000030118.10 UniProtKB/Swiss-Prot
  ENSMUST00000125442.8 UniProtKB/TrEMBL
  ENSMUST00000137246.8 UniProtKB/TrEMBL
  ENSMUST00000149794.2 UniProtKB/TrEMBL
  ENSMUST00000164233 ENTREZGENE
  ENSMUST00000164233.8 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.287.110 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Heat shock protein DnaJ, cysteine-rich domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Urease metallochaperone UreE, N-terminal domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DnaJ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_domain_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNJA1/2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP40/DnaJ_pept-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP_DnaJ_Cys-rich_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP_DnaJ_Cys-rich_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  J_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15502 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1270129 ENTREZGENE
NCBI Gene 15502 ENTREZGENE
PANTHER DNAJ HOMOLOG SUBFAMILY A MEMBER 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR43888 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DnaJ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DnaJ_CXXCXGXG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dnaja1 PhenoGen
PRINTS JDOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE DNAJ_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNAJ_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_CR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DnaJ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46565 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49493 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57938 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1AXX9_MOUSE UniProtKB/TrEMBL
  B1AXY0_MOUSE UniProtKB/TrEMBL
  B1AXY1_MOUSE UniProtKB/TrEMBL
  DNJA1_MOUSE UniProtKB/Swiss-Prot
  P54102 ENTREZGENE
  P63037 ENTREZGENE
  Q3TK61 ENTREZGENE, UniProtKB/TrEMBL
  Q5NTY0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary P54102 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-22 Dnaja1  DnaJ heat shock protein family (Hsp40) member A1    DnaJ (Hsp40) homolog, subfamily A, member 1  Symbol and/or name change 5135510 APPROVED