Dmxl1 (Dmx-like 1) - Rat Genome Database

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Gene: Dmxl1 (Dmx-like 1) Mus musculus
Analyze
Symbol: Dmxl1
Name: Dmx-like 1
RGD ID: 1552763
MGI Page MGI
Description: Predicted to be involved in vacuolar acidification. Predicted to be part of RAVE complex. Orthologous to human DMXL1 (Dmx like 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C630007L23Rik; D030030C22; dmX-like protein 1; X-like 1 protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391849,965,657 - 50,098,540 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1849,965,737 - 50,098,540 (+)EnsemblGRCm39 Ensembl
GRCm381849,832,590 - 49,965,473 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1849,832,670 - 49,965,473 (+)EnsemblGRCm38mm10GRCm38
MGSCv371849,992,667 - 50,124,739 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361849,958,327 - 50,090,415 (+)NCBIMGSCv36mm8
Celera1851,159,366 - 51,291,703 (+)NCBICelera
Cytogenetic Map18D1NCBI
cM Map1827.12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
RAVE complex  (IBA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15741177   PMID:16141072   PMID:16141073   PMID:21267068  
PMID:21873635   PMID:24457600   PMID:26442671   PMID:31040226   PMID:32325033   PMID:32554809  


Genomics

Comparative Map Data
Dmxl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391849,965,657 - 50,098,540 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1849,965,737 - 50,098,540 (+)EnsemblGRCm39 Ensembl
GRCm381849,832,590 - 49,965,473 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1849,832,670 - 49,965,473 (+)EnsemblGRCm38mm10GRCm38
MGSCv371849,992,667 - 50,124,739 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361849,958,327 - 50,090,415 (+)NCBIMGSCv36mm8
Celera1851,159,366 - 51,291,703 (+)NCBICelera
Cytogenetic Map18D1NCBI
cM Map1827.12NCBI
DMXL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385119,071,027 - 119,249,127 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5119,037,772 - 119,249,138 (+)EnsemblGRCh38hg38GRCh38
GRCh375118,406,722 - 118,584,822 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365118,434,983 - 118,612,721 (+)NCBINCBI36Build 36hg18NCBI36
Build 345118,435,083 - 118,612,721NCBI
Celera5114,354,305 - 114,538,495 (+)NCBICelera
Cytogenetic Map5q23.1NCBI
HuRef5113,594,456 - 113,779,935 (+)NCBIHuRef
CHM1_15117,839,648 - 118,017,742 (+)NCBICHM1_1
T2T-CHM13v2.05119,584,012 - 119,769,943 (+)NCBIT2T-CHM13v2.0
Dmxl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81845,179,505 - 45,349,999 (+)NCBIGRCr8
mRatBN7.21842,993,292 - 43,163,457 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1842,993,340 - 43,163,456 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1845,036,322 - 45,206,529 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01845,757,411 - 45,921,796 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01843,542,215 - 43,712,440 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01844,468,762 - 44,644,769 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1844,468,784 - 44,642,050 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01843,689,005 - 43,866,902 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41844,819,576 - 44,828,508 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11844,857,206 - 44,981,563 (+)NCBI
Celera1841,218,987 - 41,388,761 (+)NCBICelera
Cytogenetic Map18q11NCBI
Dmxl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540838,705,595 - 38,848,874 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540838,705,489 - 38,850,770 (+)NCBIChiLan1.0ChiLan1.0
DMXL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24114,334,243 - 114,525,577 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15112,487,976 - 112,679,240 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05114,443,624 - 114,634,900 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15120,229,732 - 120,420,341 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5120,229,875 - 120,418,440 (+)Ensemblpanpan1.1panPan2
DMXL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1118,435,939 - 8,563,525 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl118,436,322 - 8,561,550 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha119,564,594 - 9,692,262 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0118,522,304 - 8,649,885 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl118,522,766 - 8,649,947 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1118,393,926 - 8,519,212 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0118,449,622 - 8,578,309 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0118,707,210 - 8,835,941 (+)NCBIUU_Cfam_GSD_1.0
Dmxl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213131,454,394 - 131,618,420 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367152,013,722 - 2,179,224 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367152,013,745 - 2,177,418 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DMXL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2123,003,086 - 123,141,060 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12123,003,077 - 123,142,865 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22128,440,506 - 128,543,775 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DMXL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12322,312,178 - 22,488,151 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2322,312,204 - 22,490,906 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603455,827,070 - 56,008,726 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dmxl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247332,440,068 - 2,610,899 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247332,438,874 - 2,610,987 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dmxl1
4887 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2138
Count of miRNA genes:640
Interacting mature miRNAs:822
Transcripts:ENSMUST00000041772, ENSMUST00000180611, ENSMUST00000181042, ENSMUST00000181828, ENSMUST00000181907
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226723Tibw9_mtibia width 9, proximal, 16 week (mouse)18320000060933072Mouse
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961272643Mouse
1357603Mom3_mmodifier of Min 3 (mouse)Not determined181403002367098962Mouse
1300994Pvcan3_mprotection against vaginal candidiasis 3 (mouse)Not determined181619964050199776Mouse
1301307Phospq1_mphospholipid QTL 1 (mouse)Not determined181813970452139859Mouse
1300638Im7_mimmunoregulatory 7 (mouse)Not determined181901887453018992Mouse
1558743Kcal1_mkilocalorie 1 (mouse)Not determined181901887453018992Mouse
11532709Sluc41_msusceptibility to lung cancer 41 (mouse)182095369457590708Mouse
13463476Hctq8_mhematocrit QTL 8 (mouse)182121758055217727Mouse
1300877Adip8_madiposity 8 (mouse)Not determined182261991456620127Mouse
11532710Sluc41a_msusceptibility to lung cancer 41a (mouse)182261991456620127Mouse
11532715Sluc41b_msusceptibility to lung cancer 41b (mouse)182261991456620127Mouse
11532716Sluc41c_msusceptibility to lung cancer 41c (mouse)182261991456620127Mouse
1301570Sluc14_msusceptibility to lung cancer 14 (mouse)Not determined182261991456620127Mouse
4142031Moen1_mmodifier of engrailed QTL 1 (mouse)Not determined182411556058115730Mouse
25823173Hrsq12_mhost response to SARS QTL 12, hemorrhage (mouse)182489588178339555Mouse
12904950Smmq3_msoleus muscle mass QTL 3 (mouse)182605687560056875Mouse
25823167Hrsq5_mhost response to SARS QTL 5, D3% weight (mouse)182724111558827077Mouse
25823171Hrsq10_mhost response to SARS QTL 10, D4% weight (mouse)182724111558827077Mouse
25823174Hrsq11_mhost response to SARS QTL 11, log titer (mouse)182724111558827077Mouse
1301400Lmr13_mleishmaniasis resistance 13 (mouse)Not determined182810938062109518Mouse
4141857Mhysq5_mmale hybrid sterility QTL 5 (mouse)Not determined2813060462130739Mouse
1302163Bmd16_mbone mineral density 16 (mouse)Not determined182966791463668060Mouse
12880412V125Dq12_mvitamin D active form serum level QTL 12 (mouse)183023306764233067Mouse
1300685Scc5_mcolon tumor susceptibility 5 (mouse)Not determined183198848065988629Mouse
1357690Vtbt19_mvertebral trabecular bone trait 19 (mouse)Not determined183309104367091221Mouse
1301771Pcyts6_mplasmacytoma susceptibility 6 (mouse)Not determined183565863269658851Mouse
4142366Chlq10_mcirculating hormone level QTL 10 (mouse)Not determined183629102270291180Mouse
15039381Ltgq8_mliver triglyceride QTL 8 (mouse)183820656972206569Mouse
15039383Mvlq5_mmicrovesicular liver lesion QTL 5 (mouse)183820656972206569Mouse
15039384Liviq1_mliver inflammation QTL 1 (mouse)183820656972206569Mouse
15039386Mvlq4_mmacrovesicular liver lesion QTL 4 (mouse)183820656972206569Mouse
12050070Nabq2_mnasal bone morphology QTL 2 (mouse)183910367773103793Mouse
1357639Obsty4_mobesity 4 (mouse)Not determined183961991484638778Mouse
1301902Hrtfm4_mheart failure modifier 4 (mouse)Not determined184331112077311343Mouse
1301215Thcr_mT helper cell response (mouse)Not determined184513060468778777Mouse
12904745Carcdq2_mcardiac collagen deposition QTL 2 (mouse)184642328780423287Mouse
10412184Sstapa1_mSuseptibility to Staphylococus aureus infection 1 (mouse)Not determined184654154657590708Mouse
11039493Ltpr8d_mLeishmania tropica response 8d (mouse)184687490380875042Mouse
11039494Ltpr8b_mLeishmania tropica response 8b (mouse)184687490380875042Mouse

Markers in Region
D3Mit262.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map18D1UniSTS
cM Map380.2UniSTS
Whitehead Genetic360.1UniSTS
D18Mit24  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381849,957,976 - 49,958,154UniSTSGRCm38
MGSCv371850,117,630 - 50,117,808UniSTSGRCm37
Celera1851,284,569 - 51,284,773UniSTS
Cytogenetic Map18D1UniSTS
cM Map1825.0UniSTS
Whitehead Genetic1816.4UniSTS
Whitehead/MRC_RH18715.52UniSTS
Whitehead_YAC18 UniSTS
px-31f3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B5UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map16C3.3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map10A3-A4UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B5UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map10C3UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map10B5.1UniSTS
Cytogenetic Map18E4UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map18D1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map17B3UniSTS
Cytogenetic Map12C2UniSTS
Cytogenetic Map13B2UniSTS
Cytogenetic Map15A1UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map10D1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map18D3UniSTS
cM Map1060.0UniSTS
cM Map154.6UniSTS
cM Map439.4UniSTS
cM Map1170.0UniSTS
cM Map1336.0UniSTS
cM Map518.2UniSTS
cM Map1229.0UniSTS
cM MapX42.0UniSTS
cM Map1347.01UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006525916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006525917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006525918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC113451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC166570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02092752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY590892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000041772   ⟹   ENSMUSP00000045559
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1849,966,064 - 50,098,540 (+)Ensembl
GRCm38.p6 Ensembl1849,832,997 - 49,965,473 (+)Ensembl
RefSeq Acc Id: ENSMUST00000180611   ⟹   ENSMUSP00000137871
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1849,965,737 - 50,097,321 (+)Ensembl
GRCm38.p6 Ensembl1849,832,670 - 49,964,254 (+)Ensembl
RefSeq Acc Id: ENSMUST00000181042
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1850,089,042 - 50,092,710 (+)Ensembl
GRCm38.p6 Ensembl1849,955,975 - 49,959,643 (+)Ensembl
RefSeq Acc Id: ENSMUST00000181828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1850,083,166 - 50,087,778 (+)Ensembl
GRCm38.p6 Ensembl1849,950,099 - 49,954,711 (+)Ensembl
RefSeq Acc Id: ENSMUST00000181907
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1850,027,163 - 50,066,341 (+)Ensembl
GRCm38.p6 Ensembl1849,894,096 - 49,933,274 (+)Ensembl
RefSeq Acc Id: ENSMUST00000224938   ⟹   ENSMUSP00000153077
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1850,055,780 - 50,064,981 (+)Ensembl
GRCm38.p6 Ensembl1849,922,713 - 49,931,914 (+)Ensembl
RefSeq Acc Id: NM_001081371   ⟹   NP_001074840
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391849,966,064 - 50,098,540 (+)NCBI
GRCm381849,832,997 - 49,965,473 (+)NCBI
MGSCv371849,992,667 - 50,124,739 (+)RGD
Celera1851,159,350 - 51,292,091 (+)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006525916   ⟹   XP_006525979
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391849,965,657 - 50,097,332 (+)NCBI
GRCm381849,832,590 - 49,964,265 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006525917   ⟹   XP_006525980
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391849,965,657 - 50,097,332 (+)NCBI
GRCm381849,832,590 - 49,964,265 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006525918   ⟹   XP_006525981
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391849,965,657 - 50,097,332 (+)NCBI
GRCm381849,832,590 - 49,964,265 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250455   ⟹   XP_030106315
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391849,965,657 - 50,097,332 (+)NCBI
GRCm381849,832,590 - 49,964,265 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001074840   ⟸   NM_001081371
- UniProtKB: Q6PHM6 (UniProtKB/Swiss-Prot),   Q3TLG8 (UniProtKB/Swiss-Prot),   Q8BQF2 (UniProtKB/Swiss-Prot),   Q6PNC0 (UniProtKB/Swiss-Prot),   F8WGX5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006525979   ⟸   XM_006525916
- Peptide Label: isoform X1
- UniProtKB: F8WGX5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006525980   ⟸   XM_006525917
- Peptide Label: isoform X2
- UniProtKB: F8WGX5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006525981   ⟸   XM_006525918
- Peptide Label: isoform X3
- UniProtKB: F8WGX5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030106315   ⟸   XM_030250455
- Peptide Label: isoform X4
- UniProtKB: F8WGX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000153077   ⟸   ENSMUST00000224938
RefSeq Acc Id: ENSMUSP00000045559   ⟸   ENSMUST00000041772
RefSeq Acc Id: ENSMUSP00000137871   ⟸   ENSMUST00000180611
Protein Domains
RAVE complex protein Rav1 C-terminal

Promoters
RGD ID:13677776
Promoter ID:EPDNEW_M23037
Type:single initiation site
Name:Dmxl1_1
Description:Mus musculus Dmx-like 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381849,833,045 - 49,833,105EPDNEW
RGD ID:6829179
Promoter ID:MM_KWN:25256
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001081371,   UC008EWO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361849,991,961 - 49,992,461 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443926 AgrOrtholog
Ensembl Genes ENSMUSG00000037416 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000041772.6 UniProtKB/TrEMBL
  ENSMUST00000180611 ENTREZGENE
  ENSMUST00000180611.8 UniProtKB/Swiss-Prot
  ENSMUST00000224938.2 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Rav1p_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:240283 UniProtKB/Swiss-Prot
MGD MGI:2443926 ENTREZGENE
NCBI Gene 240283 ENTREZGENE
PANTHER DMX-LIKE PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RABCONNECTIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Rav1p_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dmxl1 PhenoGen
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A286YD42_MOUSE UniProtKB/TrEMBL
  DMXL1_MOUSE UniProtKB/Swiss-Prot
  F8WGX5 ENTREZGENE, UniProtKB/TrEMBL
  Q3TLG8 ENTREZGENE
  Q3UUU7_MOUSE UniProtKB/TrEMBL
  Q6PHM6 ENTREZGENE
  Q6PNC0 ENTREZGENE
  Q8BQF2 ENTREZGENE
  Q8VDV5_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3TLG8 UniProtKB/Swiss-Prot
  Q6PHM6 UniProtKB/Swiss-Prot
  Q8BQF2 UniProtKB/Swiss-Prot