Sh3bp5 (SH3-domain binding protein 5 (BTK-associated)) - Rat Genome Database

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Gene: Sh3bp5 (SH3-domain binding protein 5 (BTK-associated)) Mus musculus
Analyze
Symbol: Sh3bp5
Name: SH3-domain binding protein 5 (BTK-associated)
RGD ID: 1552598
MGI Page MGI
Description: Predicted to enable guanyl-nucleotide exchange factor activity and protein kinase inhibitor activity. Predicted to be involved in intracellular signal transduction. Predicted to be located in cytoplasmic vesicle membrane; mitochondrion; and nuclear body. Predicted to be active in cytoplasm. Is expressed in cerebral cortex ventricular layer and cortical plate. Orthologous to human SH3BP5 (SH3 domain binding protein 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI606498; S; Sab; SH3 domain-binding protein 5; SH3 domain-binding protein that preferentially associates with BTK; SH3BP-5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391431,094,571 - 31,158,056 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1431,081,837 - 31,158,035 (-)EnsemblGRCm39 Ensembl
GRCm381431,372,614 - 31,436,100 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,359,880 - 31,436,078 (-)EnsemblGRCm38mm10GRCm38
MGSCv371432,187,141 - 32,249,219 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361430,203,993 - 30,264,870 (-)NCBIMGSCv36mm8
Celera1427,632,639 - 27,694,829 (-)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dichloroethane  (EXP)
1,3,5-trinitro-1,3,5-triazinane  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2-palmitoylglycerol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxyphenyl retinamide  (EXP)
8-Br-cAMP  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
Aroclor 1254  (EXP)
arotinoid acid  (ISO)
Bardoxolone methyl  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
buspirone  (ISO)
buta-1,3-diene  (EXP)
butanal  (ISO)
cadmium dichloride  (ISO)
capsaicin  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
CHIR 99021  (ISO)
chloroprene  (EXP)
cisplatin  (EXP)
clofibrate  (EXP)
cobalt dichloride  (ISO)
cortisol  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diethyl maleate  (ISO)
dioxygen  (EXP,ISO)
disodium selenite  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
fipronil  (ISO)
flutamide  (ISO)
furan  (ISO)
glafenine  (ISO)
indometacin  (ISO)
L-ascorbic acid  (ISO)
L-ascorbic acid 2-phosphate  (ISO)
leflunomide  (ISO)
levofloxacin  (ISO)
metformin  (ISO)
methapyrilene  (ISO)
methylseleninic acid  (ISO)
mitomycin C  (ISO)
N-Nitrosopyrrolidine  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (ISO)
propiconazole  (EXP)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
senecionine  (EXP)
silicon dioxide  (EXP)
sodium arsenite  (EXP,ISO)
tauroursodeoxycholic acid  (ISO)
Tesaglitazar  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
trovafloxacin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
XAV939  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10339589   PMID:10349636   PMID:10702676   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:15489334   PMID:15782199   PMID:16107646  
PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750   PMID:21844199   PMID:21873635   PMID:23375831   PMID:23861391   PMID:24407242   PMID:25666017   PMID:26845758   PMID:27626380  
PMID:28661486   PMID:28671696   PMID:31487267   PMID:32554809   PMID:34321999   PMID:34331779  


Genomics

Comparative Map Data
Sh3bp5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391431,094,571 - 31,158,056 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1431,081,837 - 31,158,035 (-)EnsemblGRCm39 Ensembl
GRCm381431,372,614 - 31,436,100 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,359,880 - 31,436,078 (-)EnsemblGRCm38mm10GRCm38
MGSCv371432,187,141 - 32,249,219 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361430,203,993 - 30,264,870 (-)NCBIMGSCv36mm8
Celera1427,632,639 - 27,694,829 (-)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.11NCBI
SH3BP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38315,254,353 - 15,341,380 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl315,254,353 - 15,341,368 (-)EnsemblGRCh38hg38GRCh38
GRCh37315,295,860 - 15,382,887 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36315,271,361 - 15,357,905 (-)NCBINCBI36Build 36hg18NCBI36
Build 34315,271,367 - 15,348,892NCBI
Celera315,234,616 - 15,321,139 (-)NCBICelera
Cytogenetic Map3p25.1NCBI
HuRef315,231,318 - 15,318,336 (-)NCBIHuRef
CHM1_1315,246,746 - 15,333,790 (-)NCBICHM1_1
T2T-CHM13v2.0315,256,759 - 15,343,784 (-)NCBIT2T-CHM13v2.0
Sh3bp5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,589,877 - 6,676,524 (-)NCBIGRCr8
mRatBN7.2166,583,462 - 6,678,344 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,583,465 - 6,698,975 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx166,595,768 - 6,660,252 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,740,664 - 7,805,146 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,602,675 - 6,667,565 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,473,367 - 7,559,976 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,473,370 - 7,538,201 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,408,996 - 7,472,907 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,822,512 - 6,888,922 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1166,822,512 - 6,888,920 (-)NCBI
Celera168,541,799 - 8,606,037 (+)NCBICelera
Cytogenetic Map16p16NCBI
Sh3bp5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554302,196,967 - 2,264,953 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554302,251,544 - 2,266,166 (+)NCBIChiLan1.0ChiLan1.0
SH3BP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2215,239,521 - 15,317,375 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1315,244,282 - 15,321,989 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0315,180,369 - 15,257,951 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1315,517,447 - 15,594,971 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl315,517,447 - 15,594,971 (-)Ensemblpanpan1.1panPan2
SH3BP5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12327,258,502 - 27,335,175 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2327,202,875 - 27,334,010 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2327,232,632 - 27,309,150 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02327,770,472 - 27,847,079 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2327,715,728 - 27,847,075 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12327,460,017 - 27,536,480 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02327,521,691 - 27,598,215 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02327,770,953 - 27,847,541 (+)NCBIUU_Cfam_GSD_1.0
Sh3bp5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118169,965,168 - 169,971,857 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364733,038,963 - 3,109,174 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364733,103,878 - 3,110,435 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SH3BP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl132,506,156 - 2,585,526 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1132,504,282 - 2,585,601 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2132,433,078 - 2,512,617 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SH3BP5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11560,098,901 - 60,175,421 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1560,100,132 - 60,175,349 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604133,128,495 - 33,204,981 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sh3bp5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248224,950,735 - 5,021,337 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248224,950,735 - 5,021,233 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Sh3bp5
1534 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:991
Count of miRNA genes:455
Interacting mature miRNAs:536
Transcripts:ENSMUST00000091903, ENSMUST00000100730, ENSMUST00000140002, ENSMUST00000147586
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301991Wta3_mweight adult 3 (mouse)Not determined14388747337887650Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse

Markers in Region
BE457740  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381431,380,669 - 31,380,809UniSTSGRCm38
MGSCv371432,193,855 - 32,193,995UniSTSGRCm37
Celera1427,639,353 - 27,639,493UniSTS
Cytogenetic Map14BUniSTS
Whitehead/MRC_RH14229.56UniSTS
AI606498  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381431,373,805 - 31,373,954UniSTSGRCm38
MGSCv371432,186,991 - 32,187,140UniSTSGRCm37
Celera1427,632,489 - 27,632,638UniSTS
Cytogenetic Map14BUniSTS
Whitehead/MRC_RH14222.67UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001347585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB016835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC108416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM947586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ173956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU609611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY252555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000091903   ⟹   ENSMUSP00000089517
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1431,095,742 - 31,158,022 (-)Ensembl
GRCm38.p6 Ensembl1431,373,785 - 31,436,065 (-)Ensembl
RefSeq Acc Id: ENSMUST00000100730   ⟹   ENSMUSP00000098296
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1431,095,742 - 31,139,634 (-)Ensembl
GRCm38.p6 Ensembl1431,373,785 - 31,417,677 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140002   ⟹   ENSMUSP00000117152
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1431,081,837 - 31,158,035 (-)Ensembl
GRCm38.p6 Ensembl1431,359,880 - 31,436,078 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147586
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1431,099,552 - 31,129,342 (-)Ensembl
GRCm38.p6 Ensembl1431,377,595 - 31,407,385 (-)Ensembl
RefSeq Acc Id: NM_001347585   ⟹   NP_001334514
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,094,571 - 31,139,628 (-)NCBI
GRCm381431,372,614 - 31,417,677 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001404586   ⟹   NP_001391515
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,094,571 - 31,158,056 (-)NCBI
RefSeq Acc Id: NM_001404587   ⟹   NP_001391516
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,094,571 - 31,158,056 (-)NCBI
RefSeq Acc Id: NM_001404588   ⟹   NP_001391517
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,094,571 - 31,158,056 (-)NCBI
RefSeq Acc Id: NM_001404589   ⟹   NP_001391518
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,094,571 - 31,158,056 (-)NCBI
RefSeq Acc Id: NM_011894   ⟹   NP_036024
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,094,571 - 31,158,056 (-)NCBI
GRCm381431,372,614 - 31,436,100 (-)NCBI
MGSCv371432,187,141 - 32,249,219 (-)RGD
Celera1427,632,639 - 27,694,829 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030247814   ⟹   XP_030103674
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,095,731 - 31,157,775 (-)NCBI
GRCm381431,373,774 - 31,435,818 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247815   ⟹   XP_030103675
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391431,095,731 - 31,130,802 (-)NCBI
GRCm381431,373,774 - 31,408,845 (-)NCBI
Sequence:
RefSeq Acc Id: NP_036024   ⟸   NM_011894
- Peptide Label: isoform 1
- UniProtKB: Q8VCZ0 (UniProtKB/Swiss-Prot),   Q8C903 (UniProtKB/Swiss-Prot),   Q3TTD6 (UniProtKB/Swiss-Prot),   Q9Z131 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001334514   ⟸   NM_001347585
- Peptide Label: isoform 2
- UniProtKB: Q8VCZ0 (UniProtKB/Swiss-Prot),   Q8C903 (UniProtKB/Swiss-Prot),   Q3TTD6 (UniProtKB/Swiss-Prot),   Q9Z131 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030103674   ⟸   XM_030247814
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030103675   ⟸   XM_030247815
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000089517   ⟸   ENSMUST00000091903
RefSeq Acc Id: ENSMUSP00000117152   ⟸   ENSMUST00000140002
RefSeq Acc Id: ENSMUSP00000098296   ⟸   ENSMUST00000100730
RefSeq Acc Id: NP_001391516   ⟸   NM_001404587
- Peptide Label: isoform 4
- UniProtKB: Q9Z131 (UniProtKB/Swiss-Prot),   Q8VCZ0 (UniProtKB/Swiss-Prot),   Q8C903 (UniProtKB/Swiss-Prot),   Q3TTD6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391517   ⟸   NM_001404588
- Peptide Label: isoform 5
- UniProtKB: Q9Z131 (UniProtKB/Swiss-Prot),   Q8VCZ0 (UniProtKB/Swiss-Prot),   Q8C903 (UniProtKB/Swiss-Prot),   Q3TTD6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391518   ⟸   NM_001404589
- Peptide Label: isoform 6
- UniProtKB: Q9Z131 (UniProtKB/Swiss-Prot),   Q8VCZ0 (UniProtKB/Swiss-Prot),   Q8C903 (UniProtKB/Swiss-Prot),   Q3TTD6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391515   ⟸   NM_001404586
- Peptide Label: isoform 3
- UniProtKB: Q9Z131 (UniProtKB/Swiss-Prot),   Q8VCZ0 (UniProtKB/Swiss-Prot),   Q8C903 (UniProtKB/Swiss-Prot),   Q3TTD6 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z131-F1-model_v2 AlphaFold Q9Z131 1-463 view protein structure

Promoters
RGD ID:8681830
Promoter ID:EPDNEW_M18946
Type:initiation region
Name:Sh3bp5_2
Description:Mus musculus SH3-domain binding protein 5 (BTK-associated) ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18947  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381431,417,671 - 31,417,731EPDNEW
RGD ID:8681832
Promoter ID:EPDNEW_M18947
Type:initiation region
Name:Sh3bp5_1
Description:Mus musculus SH3-domain binding protein 5 (BTK-associated) ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M18946  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381431,436,048 - 31,436,108EPDNEW
RGD ID:6825416
Promoter ID:MM_KWN:16109
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000069057
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361432,220,526 - 32,221,282 (-)MPROMDB
RGD ID:6825415
Promoter ID:MM_KWN:16110
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   Brain,   Kidney,   Liver,   Spleen
Transcripts:OTTMUST00000069056
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361432,230,554 - 32,231,054 (-)MPROMDB
RGD ID:6825414
Promoter ID:MM_KWN:16111
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   Spleen
Transcripts:ENSMUST00000022449,   ENSMUST00000091903,   OTTMUST00000069055
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361432,248,966 - 32,249,466 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1344391 AgrOrtholog
Ensembl Genes ENSMUSG00000021892 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000091903 ENTREZGENE
  ENSMUST00000091903.5 UniProtKB/Swiss-Prot
  ENSMUST00000100730 ENTREZGENE
  ENSMUST00000100730.10 UniProtKB/Swiss-Prot
  ENSMUST00000140002.8 UniProtKB/Swiss-Prot
InterPro SH3BP5 UniProtKB/Swiss-Prot
KEGG Report mmu:24056 UniProtKB/Swiss-Prot
MGD MGI:1344391 ENTREZGENE
NCBI Gene 24056 ENTREZGENE
PANTHER PTHR19423 UniProtKB/Swiss-Prot
  SH3 DOMAIN-BINDING PROTEIN 5 UniProtKB/Swiss-Prot
Pfam SH3BP5 UniProtKB/Swiss-Prot
PhenoGen Sh3bp5 PhenoGen
UniProt 3BP5_MOUSE UniProtKB/Swiss-Prot
  Q3TTD6 ENTREZGENE
  Q8C903 ENTREZGENE
  Q8VCZ0 ENTREZGENE
  Q9Z131 ENTREZGENE
UniProt Secondary Q3TTD6 UniProtKB/Swiss-Prot
  Q8C903 UniProtKB/Swiss-Prot
  Q8VCZ0 UniProtKB/Swiss-Prot