Kifc1 (kinesin family member C1) - Rat Genome Database

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Gene: Kifc1 (kinesin family member C1) Mus musculus
Analyze
Symbol: Kifc1
Name: kinesin family member C1
RGD ID: 1552470
MGI Page MGI
Description: Enables minus-end-directed microtubule motor activity. Acts upstream of or within minus-end-directed vesicle transport along microtubule and negative regulation of centrosome duplication. Located in endocytic vesicle; nucleus; and spindle. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Orthologous to human KIFC1 (kinesin family member C1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 100042970; Gm4137; HSE; HSET; Kifc; Kifc5a; Kifc5b; kinesin family c-terminal 5A; kinesin family c-terminal 5B; kinesin family member C5A; kinesin family member C5B; kinesin motor protein KIFC4; kinesin-like 2a; kinesin-like protein KIFC1; kinesin-related protein KIFC5A; KN; KNSL2; Knsl2a; MGC117605; MGC5880; MGC67832; MGC76666; predicted gene 4137; Tctex-7; Tctex-7A; Tctex7; Tctex7a
RGD Orthologs
Human
Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Kifc5c-ps  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,094,640 - 34,109,607 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1734,094,633 - 34,109,635 (-)EnsemblGRCm39 Ensembl
GRCm381733,875,664 - 33,890,633 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1733,875,659 - 33,890,661 (-)EnsemblGRCm38mm10GRCm38
MGSCv371734,011,931 - 34,042,544 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361727,054,036 - 27,069,524 (+)NCBIMGSCv36mm8
Celera1736,628,582 - 36,643,546 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
beta-lapachone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
bortezomib  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
chromium(6+)  (EXP,ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
corticosterone  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
diallyl trisulfide  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (ISO)
diethyl maleate  (ISO)
dioxygen  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
fenofibrate  (ISO)
folic acid  (EXP,ISO)
FR900359  (ISO)
fulvestrant  (ISO)
gentamycin  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
leflunomide  (ISO)
lidocaine  (ISO)
linezolid  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
lucanthone  (ISO)
MeIQx  (ISO)
mercury dichloride  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-Nitrosopyrrolidine  (ISO)
niclosamide  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
palbociclib  (ISO)
paracetamol  (ISO)
PCB138  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenanthridone  (ISO)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
propanal  (ISO)
quercetin  (ISO)
silicon dioxide  (EXP)
sirolimus  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tacrolimus hydrate  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trichloroethene  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
tunicamycin  (ISO)
valproic acid  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. All kinesin superfamily protein, KIF, genes in mouse and human. Miki H, etal., Proc Natl Acad Sci U S A 2001 Jun 19;98(13):7004-11.
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1718647   PMID:1731353   PMID:8268678   PMID:9115736   PMID:9339368   PMID:10349636   PMID:10775188   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11389549   PMID:12466851  
PMID:12477932   PMID:14610273   PMID:14681479   PMID:15112104   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16638812   PMID:17360972   PMID:17967808   PMID:18237440   PMID:18799693  
PMID:19367708   PMID:21267068   PMID:21873635   PMID:22496869   PMID:22922362   PMID:23807208   PMID:24457600   PMID:26496610   PMID:26618355   PMID:29229923   PMID:31904480   PMID:35142352  
PMID:35259401   PMID:38355793   PMID:38896608  


Genomics

Comparative Map Data
Kifc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,094,640 - 34,109,607 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1734,094,633 - 34,109,635 (-)EnsemblGRCm39 Ensembl
GRCm381733,875,664 - 33,890,633 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1733,875,659 - 33,890,661 (-)EnsemblGRCm38mm10GRCm38
MGSCv371734,011,931 - 34,042,544 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361727,054,036 - 27,069,524 (+)NCBIMGSCv36mm8
Celera1736,628,582 - 36,643,546 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
KIFC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38633,391,461 - 33,409,896 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl633,391,823 - 33,409,896 (+)EnsemblGRCh38hg38GRCh38
GRCh37633,359,600 - 33,377,673 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36633,467,583 - 33,485,625 (+)NCBINCBI36Build 36hg18NCBI36
Celera634,913,703 - 34,932,095 (+)NCBICelera
Cytogenetic Map6p21.32NCBI
HuRef633,101,381 - 33,119,773 (+)NCBIHuRef
CHM1_1633,361,187 - 33,379,567 (+)NCBICHM1_1
T2T-CHM13v2.0633,212,742 - 33,231,258 (+)NCBIT2T-CHM13v2.0
Kifc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8205,000,929 - 5,018,967 (+)NCBIGRCr8
mRatBN7.2204,998,832 - 5,017,107 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl204,999,047 - 5,017,105 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx205,722,546 - 5,742,381 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0205,084,291 - 5,104,118 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0205,564,478 - 5,582,550 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0205,509,059 - 5,526,175 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,509,059 - 5,526,175 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,567,671 - 7,585,188 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4205,150,810 - 5,169,264 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1205,151,036 - 5,169,489 (+)NCBI
Celera206,581,869 - 6,599,528 (+)NCBICelera
Cytogenetic Map20p12NCBI

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1643
Count of miRNA genes:697
Interacting mature miRNAs:858
Transcripts:ENSMUST00000114361, ENSMUST00000172608, ENSMUST00000173386, ENSMUST00000173492, ENSMUST00000173885, ENSMUST00000173982, ENSMUST00000174507
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
11038694Pas19_mpulmonary adenoma susceptibility 19 (mouse)172971116434754437Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
RH127078  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381733,889,370 - 33,889,588UniSTSGRCm38
MGSCv371734,026,315 - 34,026,533UniSTSGRCm37
Celera1736,642,283 - 36,642,501UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.38UniSTS
Whitehead/MRC_RH17457.12UniSTS
D49544  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38951,840,078 - 51,840,168UniSTSGRCm38
GRCm381733,875,732 - 33,875,818UniSTSGRCm38
MGSCv37951,648,183 - 51,648,273UniSTSGRCm37
MGSCv371734,012,677 - 34,012,763UniSTSGRCm37
Celera1736,628,648 - 36,628,734UniSTS
Celera949,114,218 - 49,114,308UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.38UniSTS
Whitehead/MRC_RH17460.8UniSTS
Kifc1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381733,882,187 - 33,883,399UniSTSGRCm38
GRCm381726,924,488 - 26,925,702UniSTSGRCm38
MGSCv371734,019,132 - 34,020,344UniSTSGRCm37
MGSCv371727,061,433 - 27,062,647UniSTSGRCm37
Celera1727,461,098 - 27,462,312UniSTS
Celera1736,635,102 - 36,636,319UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.38UniSTS
UniSTS:237628  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381733,877,599 - 33,877,786UniSTSGRCm38
MGSCv371734,014,544 - 34,014,731UniSTSGRCm37
Celera1736,630,515 - 36,630,702UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.38UniSTS
Kifc5a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17B1UniSTS
cM Map10 UniSTS
cM Map17 UniSTS
cM MapUN UniSTS
cM Map9 UniSTS
UniSTS:236125  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37951,647,994 - 51,648,132UniSTSGRCm37
MGSCv371727,062,779 - 27,063,241UniSTSGRCm37
Celera1727,462,444 - 27,462,906UniSTS
Celera949,114,029 - 49,114,167UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001195298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_177090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF013117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF110520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF221102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF528162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI322653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI326799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AM051187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC100328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT030732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU405655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU463309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX205646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX209658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D49544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KJ650206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000114361   ⟹   ENSMUSP00000110001
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,094,642 - 34,109,607 (-)Ensembl
GRCm38.p6 Ensembl1733,875,668 - 33,890,633 (-)Ensembl
Ensembl Acc Id: ENSMUST00000172608
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,105,171 - 34,109,570 (-)Ensembl
GRCm38.p6 Ensembl1733,886,197 - 33,890,596 (-)Ensembl
Ensembl Acc Id: ENSMUST00000173386   ⟹   ENSMUSP00000133758
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,103,614 - 34,109,513 (-)Ensembl
GRCm38.p6 Ensembl1733,884,640 - 33,890,539 (-)Ensembl
Ensembl Acc Id: ENSMUST00000173492   ⟹   ENSMUSP00000134572
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,094,633 - 34,109,635 (-)Ensembl
GRCm38.p6 Ensembl1733,875,659 - 33,890,661 (-)Ensembl
Ensembl Acc Id: ENSMUST00000173885
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,102,037 - 34,109,578 (-)Ensembl
GRCm38.p6 Ensembl1733,883,063 - 33,890,604 (-)Ensembl
Ensembl Acc Id: ENSMUST00000173982   ⟹   ENSMUSP00000133520
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,094,642 - 34,102,200 (-)Ensembl
GRCm38.p6 Ensembl1733,875,668 - 33,883,226 (-)Ensembl
Ensembl Acc Id: ENSMUST00000174507
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,101,576 - 34,109,605 (-)Ensembl
GRCm38.p6 Ensembl1733,882,602 - 33,890,631 (-)Ensembl
RefSeq Acc Id: NM_001195298   ⟹   NP_001182227
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,094,640 - 34,109,607 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001410585   ⟹   NP_001397514
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,094,640 - 34,109,607 (-)NCBI
RefSeq Acc Id: NM_001410586   ⟹   NP_001397515
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,094,640 - 34,109,607 (-)NCBI
RefSeq Acc Id: NM_001410587   ⟹   NP_001397516
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,094,640 - 34,109,607 (-)NCBI
RefSeq Acc Id: NM_001410588   ⟹   NP_001397517
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,094,640 - 34,109,607 (-)NCBI
RefSeq Acc Id: NR_177090
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,094,640 - 34,109,607 (-)NCBI
Ensembl Acc Id: ENSMUSP00000133758   ⟸   ENSMUST00000173386
Ensembl Acc Id: ENSMUSP00000134572   ⟸   ENSMUST00000173492
Ensembl Acc Id: ENSMUSP00000133520   ⟸   ENSMUST00000173982
Ensembl Acc Id: ENSMUSP00000110001   ⟸   ENSMUST00000114361
RefSeq Acc Id: NP_001397514   ⟸   NM_001410585
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001397516   ⟸   NM_001410587
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001397515   ⟸   NM_001410586
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001182227   ⟸   NM_001195298
- Peptide Label: isoform 1
- UniProtKB: Q9QWT9 (UniProtKB/Swiss-Prot),   Q9JKZ0 (UniProtKB/Swiss-Prot),   Q99L84 (UniProtKB/Swiss-Prot),   Q8BV06 (UniProtKB/Swiss-Prot),   Q6PG90 (UniProtKB/Swiss-Prot),   Q4A1N2 (UniProtKB/Swiss-Prot),   Q497Y3 (UniProtKB/Swiss-Prot),   O35230 (UniProtKB/Swiss-Prot),   O08671 (UniProtKB/Swiss-Prot),   A0A068BFR6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001397517   ⟸   NM_001410588
- Peptide Label: isoform 4
Protein Domains
Kinesin motor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QWT9-F1-model_v2 AlphaFold Q9QWT9 1-674 view protein structure

Promoters
RGD ID:6828269
Promoter ID:MM_KWN:22702
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   ES_Cell,   Kidney,   Lung
Transcripts:ENSMUST00000077674,   NM_053173,   UC008BEP.1,   UC008BEQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361727,053,789 - 27,054,289 (+)MPROMDB
RGD ID:6828268
Promoter ID:MM_KWN:22703
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:ENSMUST00000088099
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361727,056,766 - 27,057,266 (+)MPROMDB
RGD ID:13675602
Promoter ID:EPDNEW_M21950
Type:initiation region
Name:Kifc1_1
Description:Mus musculus kinesin family member C1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381733,890,654 - 33,890,714EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109596 AgrOrtholog
Ensembl Genes ENSMUSG00000079553 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000173386.2 UniProtKB/TrEMBL
  ENSMUST00000173492 ENTREZGENE
  ENSMUST00000173492.9 UniProtKB/Swiss-Prot
  ENSMUST00000173982.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.1490 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Kinesin-like_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Vik1/Cik1_MT-bd UniProtKB/TrEMBL
KEGG Report mmu:100502766 UniProtKB/Swiss-Prot
  mmu:16580 UniProtKB/Swiss-Prot
MGD MGI:109596 ENTREZGENE
NCBI Gene Kifc1 ENTREZGENE
PANTHER KINESIN-LIKE PROTEIN KLP-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN CLARET SEGREGATIONAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Microtub_bd UniProtKB/TrEMBL
PhenoGen Kifc1 PhenoGen
PRINTS KINESINHEAVY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KINESIN_MOTOR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART KISc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Myosin rod fragments UniProtKB/TrEMBL
  SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tropomyosin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A068BFR6 ENTREZGENE, UniProtKB/TrEMBL
  G3UX22_MOUSE UniProtKB/TrEMBL
  G3UXN2_MOUSE UniProtKB/TrEMBL
  KIFC1_MOUSE UniProtKB/Swiss-Prot
  O08671 ENTREZGENE
  O35230 ENTREZGENE
  Q497Y3 ENTREZGENE
  Q4A1N2 ENTREZGENE
  Q5BJ94_MOUSE UniProtKB/TrEMBL
  Q6PG90 ENTREZGENE
  Q810Z7_MOUSE UniProtKB/TrEMBL
  Q8BV06 ENTREZGENE
  Q99L84 ENTREZGENE
  Q9JKZ0 ENTREZGENE
  Q9QWT9 ENTREZGENE
UniProt Secondary O08671 UniProtKB/Swiss-Prot
  O35230 UniProtKB/Swiss-Prot
  Q497Y3 UniProtKB/Swiss-Prot
  Q4A1N2 UniProtKB/Swiss-Prot
  Q6PG90 UniProtKB/Swiss-Prot
  Q8BV06 UniProtKB/Swiss-Prot
  Q99L84 UniProtKB/Swiss-Prot
  Q9JKZ0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-15 Kifc1  kinesin family member C1  Gm4137  predicted gene 4137  Data merged from RGD:2308019 737654 PROVISIONAL