Podxl2 (podocalyxin-like 2) - Rat Genome Database

Name: Podxl2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Podxl2 (podocalyxin-like 2) Mus musculus

Analyze

Symbol:

Podxl2

Name:

podocalyxin-like 2

RGD ID:

1552380

MGI Page

MGI

Description:

Predicted to be involved in leukocyte tethering or rolling. Predicted to localize to integral component of membrane. Is expressed in gut; nervous system; renal cortex; respiratory tract; and sensory organ. Orthologous to human PODXL2 (podocalyxin like 2); INTERACTS WITH 3,4-methylenedioxymethamphetamine; benzo[a]pyrene; choline.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

D130074J02Rik; Endog; endoglycan; POD; PODLX2; podocalyxin-like protein 2

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PODXL2 (podocalyxin like 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):	Podxl2 (podocalyxin-like 2)	HGNC	Treefam, EggNOG, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Podxl2 (podocalyxin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PODXL2 (podocalyxin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PODXL2 (podocalyxin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Podxl2 (podocalyxin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PODXL2 (podocalyxin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	PODXL2 (podocalyxin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Podxl2 (podocalyxin like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Podxl2 (podocalyxin-like 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|TreeFam)
Homo sapiens (human):	PODXL2 (podocalyxin like 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	podxl2 (podocalyxin-like 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	88,819,539 - 88,852,063 (-)	NCBI	GRCm39		mm39
GRCm38	6	88,842,557 - 88,875,046 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	88,842,558 - 88,875,044 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	88,792,552 - 88,824,038 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	88,808,206 - 88,839,685 (-)	NCBI			mm8
Celera	6	90,780,757 - 90,812,060 (-)	NCBI		Celera
Cytogenetic Map	6	D1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

butanal (ISO)

choline (EXP)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

cytarabine (ISO)

dorsomorphin (ISO)

folic acid (EXP)

furan (ISO)

L-methionine (EXP)

lead(0) (ISO)

lead(2+) (ISO)

pentanal (ISO)

phenylmercury acetate (ISO)

potassium chromate (ISO)

SB 431542 (ISO)

sodium arsenate (EXP)

sunitinib (ISO)

triclosan (ISO)

tunicamycin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell adhesion (IEA)

leukocyte tethering or rolling (IBA,ISO)

Cellular Component

integral component of membrane (IEA)

membrane (IEA)

Molecular Function

molecular_function (ND)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal kidney morphology (IEA)

abnormal spleen morphology (IEA)

enlarged spleen (IEA)

hydrometra (IEA)

small superior vagus ganglion (IEA)

References

References - curated


1.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
2.	RGD automated import pipeline for gene-chemical interactions
3.	van der Zwaag B, etal., Genomics 2005 Jul;86(1):55-67. Epub 2005 Apr 20.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12477932	PMID:15489334	PMID:15701716	PMID:15782199	PMID:16141072	PMID:16141073	PMID:16452087
PMID:18287559	PMID:21677750	PMID:21873635	PMID:27542690	PMID:27626380

Genomics

Comparative Map Data

Podxl2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	88,819,539 - 88,852,063 (-)	NCBI	GRCm39		mm39
GRCm38	6	88,842,557 - 88,875,046 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	88,842,558 - 88,875,044 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	88,792,552 - 88,824,038 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	88,808,206 - 88,839,685 (-)	NCBI			mm8
Celera	6	90,780,757 - 90,812,060 (-)	NCBI		Celera
Cytogenetic Map	6	D1	NCBI

PODXL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	3	127,629,185 - 127,672,802 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	3	127,629,185 - 127,672,802 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	3	127,348,028 - 127,391,645 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	3	127,348,002 - 127,391,653 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	128,830,729 - 128,874,342 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	3	128,830,757 - 128,874,343	NCBI
Celera	3	125,774,516 - 125,818,509 (+)	NCBI
Cytogenetic Map	3	q21.3	NCBI
HuRef	3	124,737,918 - 124,772,415 (+)	NCBI		HuRef
CHM1_1	3	127,311,335 - 127,354,973 (+)	NCBI		CHM1_1

Podxl2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	121,306,224 - 121,338,070 (-)	NCBI
Rnor_6.0 Ensembl	4	120,785,495 - 120,817,377 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	4	120,785,494 - 120,817,335 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	4	186,026,103 - 186,057,942 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	122,937,318 - 122,969,158 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	4	123,181,806 - 123,213,244 (-)	NCBI
Celera	4	110,259,432 - 110,291,285 (-)	NCBI		Celera
Cytogenetic Map	4	q34	NCBI

Podxl2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	15,968,877 - 15,995,617 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	15,968,877 - 15,995,617 (-)	NCBI	ChiLan1.0	ChiLan1.0

PODXL2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	131,981,894 - 132,023,746 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	131,981,894 - 132,023,747 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	3	124,673,860 - 124,717,469 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

PODXL2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	1,716,666 - 1,760,035 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	1,716,672 - 1,752,872 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Podxl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936798	736,003 - 745,634 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PODXL2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	72,579,307 - 72,622,951 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	72,579,310 - 72,630,179 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	80,097,261 - 80,140,920 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PODXL2
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	53,370,668 - 53,405,832 (-)	NCBI
ChlSab1.1 Ensembl	22	53,371,004 - 53,403,512 (-)	Ensembl

Podxl2
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624974	43,578 - 76,918 (+)	NCBI

Position Markers

Podxl2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	6	D1	UniSTS
cM Map	6		UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	1	117500000	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139100000	Mouse
4142126	W3q3_m	weight 3 weeks QTL 3 (mouse)			Not determined			4503823	96656149	Mouse
4142361	W10q11_m	weight 10 weeks QTL 11 (mouse)			Not determined			4503823	96656149	Mouse
4142271	Egq8_m	early growth QTL 8 (mouse)			Not determined			4503823	96656149	Mouse
4142232	W6q4_m	weight 6 weeks QTL 4 (mouse)			Not determined			4503823	96656149	Mouse
1558984	Cplaq9_m	circadian period of locomotor activity 9 (mouse)			Not determined		6	38669625	92607450	Mouse
10412157	Fl1n_m	fatty liver 1 in NSY (mouse)			Not determined		6	45314059	128835032	Mouse
4142259	Tabw2_m	tally ho associated body weight 2 (mouse)			Not determined			46935985	136423692	Mouse
25314319	Histh6_m	histamine hypersensitivity 6 (mouse)					6	48720000	125360000	Mouse
25314320	Histh5_m	histamine hypersensitivity 5 (mouse)					6	48720000	148450000	Mouse
1301962	Eila2_m	ethanol induced locomotor activity 2 (mouse)			Not determined		6	48726556	125356785	Mouse
1357683	Igf1sl1_m	IGF-1 serum levels 1 (mouse)			Not determined		6	52161713	116155267	Mouse
15039373	Adip28_m	adiposity 28 (mouse)					6	56308211	90308211	Mouse
15039375	Bw41_m	body weight QTL 41 (mouse)					6	56308211	90308211	Mouse
1558977	Skmw10_m	skeletal muscle weight 10 (mouse)			Not determined		6	58447583	92447710	Mouse
10043972	Obq28_m	obesity QTL 28 (mouse)			Not determined		6	58540433	92540433	Mouse
1301740	Bwq2_m	body weight QTL 2 (mouse)			Not determined		6	60057680	94057799	Mouse
1301369	Im4_m	immunoregulatory 4 (mouse)			Not determined		6	63484738	97484905	Mouse
1300650	Bw18_m	body weight QTL 18 (mouse)			Not determined		6	66713869	100714031	Mouse
1301876	Bits2_m	bitterness sensitivity 2 (mouse)			Not determined		6	70425898	104426034	Mouse
1301813	Skl3_m	skeletal size (tail length) 3 (mouse)			Not determined		6	70425898	104426034	Mouse
1301034	Egrm2_m	early growth rate (mouse)			Not determined		6	70425898	104426034	Mouse
1302020	Bbaa20_m	B.burgdorferi-associated arthritis 20 (mouse)			Not determined		6	71322621	93464093	Mouse
1300869	Stheal5_m	soft tissue heal 5 (mouse)			Not determined		6	71575060	105575178	Mouse
1300954	Fcsa1_m	femoral cross-sectional area 1 (mouse)			Not determined		6	71981024	105981170	Mouse
1301521	Pas1c_m	pulmonary adenoma susceptibility 1c (mouse)			Not determined		6	71981024	105981170	Mouse
13506930	Recrq9_m	recombination rate in male meiosis QTL 9 (mouse)					6	73500000	134700000	Mouse
1301320	Ots1_m	ovarian teratoma susceptibility 1 (mouse)			Not determined		6	75447583	104503555	Mouse
1301571	Arrd1_m	age-related retinal degeneration 1 (mouse)			Not determined		6	75544356	92607450	Mouse
1300674	Nidd3n_m	non-insulin-dependent diabetes mellitus 3 in NSY (mouse)			Not determined		6	75544356	94225955	Mouse
10412195	Efw_m	epididymal fat weight (mouse)			Not determined		6	75544356	94225955	Mouse
10043901	Pfat5_m	predicted fat percentage 5 (mouse)			Not determined		6	75607306	109607450	Mouse
10412208	Cypr4_m	cytokine production 4 (mouse)			Not determined		6	75716503	109716697	Mouse
1357875	Pfat2_m	predicted fat percentage 2 (mouse)			Not determined		6	76463949	110464093	Mouse
14697704	Stsl4_m	Salmonella typhimurium susceptibility locus 4 (mouse)					6	77100000	90000000	Mouse
13824985	Alh1_m	amplitude of lateral head displacement 1 (mouse)					6	78000000	97000000	Mouse
4141376	Dbm1_m	diabetes modifier 1 (mouse)			Not determined		6	78629504	121115387	Mouse
14696731	Pairq1_m	P. aeruginosa infection resistance QTL 1 (mouse)					6	81500000	102200000	Mouse
10043864	T2dm4sa_m	type 2 diabetes mellitus 4 in SMXA RI mice (mouse)			Not determined		6	83713869	147052561	Mouse
11251720	Ewc4_m	ethanol withdrawal and consumption 4 (mouse)					6	84122513	118122513	Mouse
1301687	Mnic2_m	macronutrient intake (mouse)			Not determined		6	86806805	113544602	Mouse
1301744	Hdlq11_m	HDL QTL 11 (mouse)			Not determined		6	87503360	121503555	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	2247
Count of miRNA genes:	661
Interacting mature miRNAs:	852
Transcripts:	ENSMUST00000038409, ENSMUST00000061262, ENSMUST00000124562, ENSMUST00000135843, ENSMUST00000140455, ENSMUST00000141348, ENSMUST00000141401, ENSMUST00000142266, ENSMUST00000145780, ENSMUST00000145944, ENSMUST00000153852
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001347327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001364575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001379217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001379218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001379219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001379220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001379221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001379222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001379223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_176973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_166540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011241375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011241376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030255445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030255447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030255448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036166218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004942963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004942964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC153923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK038943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK051761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK087743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK190030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC033384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE954844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000038409 ⟹ ENSMUSP00000040417

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,842,565 - 88,874,045 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000061262 ⟹ ENSMUSP00000058985

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,842,565 - 88,874,597 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000124562

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,843,538 - 88,845,925 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000135843

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,864,811 - 88,874,377 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000140455 ⟹ ENSMUSP00000120870

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,849,679 - 88,874,738 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000141348

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,844,176 - 88,849,377 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000141401

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,842,558 - 88,843,720 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000142266

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,849,814 - 88,865,266 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000145780 ⟹ ENSMUSP00000120460

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,849,679 - 88,874,796 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000145944 ⟹ ENSMUSP00000117954

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,842,579 - 88,875,044 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000153852

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,864,276 - 88,874,989 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000205158

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	88,846,968 - 88,848,843 (-)	Ensembl

RefSeq Acc Id:

NM_001347327 ⟹ NP_001334256

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,852,028 (-)	NCBI
GRCm38	6	88,842,557 - 88,875,046 (-)	NCBI

Sequence:

show sequence

TTTGCGCGCCCCCGAGGCCGGCCCGGGCGCCGCGGCGCTGCGGCTGCGGGCGGCAACGCTGCAC
CATGGCCCGGCCGCTGCGGGCCGCCCGACTGCCGCCGCCGCTGCTGTTGCTGCTGGCCGCCGGA
GCTTCCCTGGGTGCCTATGCAGTGGGCGTGGATGAGCCTGGCCCCGAGGGCCTCACCTCCACGT
CCCTGCTGGACCTCTTGTTGCCCACTGACTTTGAGCCACTGGACTCAGAGGAACCCAGCGAGGC
CATGGGTCTAGACGCCGGCCTAGCCCCAGGCTCGGGCTTCCCCAGTGAGGACAGCGAGGAGTCC
CGGCTCCTGCAGCCGCCACAGTACTTCTGGGAAGAAGAGGAACTAAACGGCTCCAGCCTGGACC
TGGGTCCCACTGCAGACTACGTCTTCCCAGACCTGACTGAGAAGGTGGCGTCCATGGAAGACCC
AGGCCAGGCTCCGGACCTGCCAAACCTCCCCTCCATCCTGCCCAAGATGGATCTTGCTGAGCCT
CCCTGGCATATGCCTCTGCAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAAGGGAAG
AAGAGGAGAGGGAGAAGGAAGCAGAGGAGGAGGAGGAAGAGGAAGAGCTGCTCCCTGTGAGCGG
GTCCCCAGGAGCCACCGCACAGGCCCATGCCCCTTCACCTAGCACCAGCAGCAGCACCAGCAGC
CAGAGTCCTGGGGCCACCCGGCACAGGCAGGAGGATTCTGGAGACCAGGCCACATCAGGCATGG
AAGTGGAGAGCAGTGTGAAACCCACCTTGTCAGTGCCCTCAGTCACCCCAAGTACAGTGGCCCC
GGGGGTTCAGAACTATAGCCAGGAGTCTGGGGGCACTGAGTGGCCAACTGGGGGGCTGGGGGTC
CAGTCTGAGGTTCCCCAGGGAGCTGGTGAGGGGGCCACAGTGGGAGCAGCTGACTTCGATGGCC
AGCAGGGGGCACTGCCGTCCTCTTCACTCCCACAAACAGTGCCTCCAAGTGGGACTGAGGTCCC
CAGTGAGGGTCCCCTTTACCCCAGAATCCCAGACTCTCTCCCACCTGGACCCCAAGACACAGAG
TCAACCCCTTCCTCTGCTACCTGGGGACAAGAAGGTCTCAGTGAGCAGCCCCTGGAGGGTCAGG
CAGCTGAAGCTCACTCACTAACACCGTGGGACTCTACTCAGGTGATCTGCAAGGATTGGAGCAA
CCTGGCCGGGAAGAGCTACATCATCCTGAACATGACAGAGAACATAGACTGTGAAGTATTTCGG
CGGCACCGGGGACTACGGCTCCTAGCTCTGGTGGAGGAGGTACTGCCACGCCACCGCAGTGGCC
ATCGTGGAGACTGGCATATTTCTCTGAGCAAGCCCAGTGAGAAAGAGCAACACCTGCTGATGAC
CCTTGTAGGAGAACAGGGCGTGGTACCCACTCAAGATGTCCTTTCCATGCTCAGTGGCATCCGC
AGGAGTCTGGAGGAGATTGGCATCCAGAACTACTCCACCACCAGCAGCTGCCAGGCACGAGCCA
CCCAGGTGCGCAGTGACTACGGGACGCTCTTTGTAGTGCTGGTGATCATTGGTGTCATCTGCTT
CATCATCATTGTGCTTGGCCTACTCTACAATTGTTGGCAGCGCCGGATGCCCAAGCTCAAACAC
GTGTCGCACGGTGAGGAGCTGCGCTTCGTGGAGAACGGCTGCCACGACAATCCCACGCTGGACG
TGGCCAGCGACAGCCAGTCGGAGATGCAGGAGAAGCAGCCCAGCCTGAACGGTGGGGCCATCAA
CGGCCCGAGCAGCTGGAGCGCGCTCATGGGCAGCAAACGCGACCCTGAGGACTCGGACGTGTTC
GAGGAGGACACTCACCTGTGAGCGCCGGGCCACGGGCGCGAGACTGCCCGACGCCACGGCCCCG
CGCCCCTCCCGGTCCTCCACGCGGACCACTATGCTTCCCCACCGCAGCAGGCGACCGCGGCGCA
GCTCCCACCCCGCCCTGCCCGGCCCCGAGCGCTTGCCCGAGGCCAGCGCGCTCCCCGCGCCAGG
ACTCCATTAAAGCCGCTAAGACGCGCGGGCCGCTCCGC

hide sequence

RefSeq Acc Id:

NM_001364575 ⟹ NP_001351504

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,755 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,773 (-)	NCBI

Sequence:

show sequence

GAGAAGCTCAGCAGGGAGGCGAGAGCGCACGGGTGACACCCTTGGAGAAATCGCATCGTAAAGG
TCCGGCGGGTACCCAAAGCGCGTGGGCCGGGGATGCCGAGGGCCGAGAAAGAAAGAGCTGCGTG
GCCGAGGTGGATGTTTACATGTGCGTGGAGCTTGCCTGGGAAGGCGTGTGCGTGTCGTTGTGAA
CGCGTGTCCTCGACTGCGCGGGGCAACTTTATTAGGAGCTGACAAAGGGGAGCTTCCCTGGGTG
CCTATGCAGTGGGCGTGGATGAGCCTGGCCCCGAGGGCCTCACCTCCACGTCCCTGCTGGACCT
CTTGTTGCCCACTGACTTTGAGCCACTGGACTCAGAGGAACCCAGCGAGGCCATGGGTCTAGAC
GCCGGCCTAGCCCCAGGCTCGGGCTTCCCCAGTGAGGACAGCGAGGAGTCCCGGCTCCTGCAGC
CGCCACAGTACTTCTGGGAAGAAGAGGAACTAAACGGCTCCAGCCTGGACCTGGGTCCCACTGC
AGACTACGTCTTCCCAGACCTGACTGAGAAGGTGGCGTCCATGGAAGACCCAGGCCAGGCTCCG
GACCTGCCAAACCTCCCCTCCATCCTGCCCAAGATGGATCTTGCTGAGCCTCCCTGGCATATGC
CTCTGCAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAAGGGAAGAAGAGGAGAGGGA
GAAGGAAGCAGAGGAGGAGGAGGAAGAGGAAGAGCTGCTCCCTGTGAGCGGGTCCCCAGGAGCC
ACCGCACAGGCCCATGCCCCTTCACCTAGCACCAGCAGCAGCACCAGCAGCCAGAGTCCTGGGG
CCACCCGGCACAGGCAGGAGGATTCTGGAGACCAGGCCACATCAGGCATGGAAGTGGAGAGCAG
TGTGAAACCCACCTTGTCAGTGCCCTCAGTCACCCCAAGTACAGTGGCCCCGGGGGTTCAGAAC
TATAGCCAGGAGTCTGGGGGCACTGAGTGGCCAACTGGGGGGCTGGGGGTCCAGTCTGAGGTTC
CCCAGGGAGCTGGTGAGGGGGCCACAGTGGGAGCAGCTGACTTCGATGGCCAGCAGGGGGCACT
GCCGTCCTCTTCACTCCCACAAACAGTGCCTCCAAGTGGGACTGAGGTCCCCAGTGAGGGTCCC
CTTTACCCCAGAATCCCAGACTCTCTCCCACCTGGACCCCAAGACACAGAGTCAACCCCTTCCT
CTGCTACCTGGGGACAAGAAGGTCTCAGTGAGCAGCCCCTGGAGGGTCAGGCAGCTGAAGCTCA
CTCACTAACACCGTGGGACTCTACTCAGGTGATCTGCAAGGATTGGAGCAACCTGGCCGGGAAG
AGCTACATCATCCTGAACATGACAGAGAACATAGACTGTGAAGTATTTCGGCGGCACCGGGGAC
TACGGCTCCTAGCTCTGGTGGAGGAGGTACTGCCACGCCACCGCAGTGGCCATCGTGGAGACTG
GCATATTTCTCTGAGCAAGCCCAGTGAGAAAGAGCAACACCTGCTGATGACCCTTGTAGGAGAA
CAGGGCGTGGTACCCACTCAAGATGTCCTTTCCATGCTCAGTGGCATCCGCAGGAGTCTGGAGG
AGATTGGCATCCAGAACTACTCCACCACCAGCAGCTGCCAGGCACGAGCCACCCAGGTGCGCAG
TGACTACGGGACGCTCTTTGTAGTGCTGGTGATCATTGGTGTCATCTGCTTCATCATCATTGTG
CTTGGCCTACTCTACAATTGTTGGCAGCGCCGGATGCCCAAGCTCAAACACGTGTCGCACGGTG
AGGAGCTGCGCTTCGTGGAGAACGGCTGCCACGACAATCCCACGCTGGACGTGGCCAGCGACAG
CCAGTCGGAGATGCAGGAGAAGCAGCCCAGCCTGAACGGTGGGGCCATCAACGGCCCGAGCAGC
TGGAGCGCGCTCATGGGCAGCAAACGCGACCCTGAGGACTCGGACGTGTTCGAGGAGGACACTC
ACCTGTGAGCGCCGGGCCACGGGCGCGAGACTGCCCGACGCCACGGCCCCGCGCCCCTCCCGGT
CCTCCACGCGGACCACTATGCTTCCCCACCGCAGCAGGCGACCGCGGCGCAGCTCCCACCCCGC
CCTGCCCGGCCCCGAGCGCTTGCCCGAGGCCAGCGCGCTCCCCGCGCCAGGACTCCATTAAAGC
CGCTAAGACGCGCGGGCCGCTCCGC

hide sequence

RefSeq Acc Id:

NM_001379217 ⟹ NP_001366146

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,852,028 (-)	NCBI
GRCm38	6	88,842,557 - 88,875,046 (-)	NCBI

RefSeq Acc Id:

NM_001379218 ⟹ NP_001366147

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,755 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,773 (-)	NCBI

RefSeq Acc Id:

NM_001379219 ⟹ NP_001366148

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,755 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,773 (-)	NCBI

RefSeq Acc Id:

NM_001379220 ⟹ NP_001366149

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,755 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,773 (-)	NCBI

RefSeq Acc Id:

NM_001379221 ⟹ NP_001366150

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,755 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,773 (-)	NCBI

RefSeq Acc Id:

NM_001379222 ⟹ NP_001366151

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,755 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,773 (-)	NCBI

RefSeq Acc Id:

NM_001379223 ⟹ NP_001366152

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,755 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,773 (-)	NCBI

RefSeq Acc Id:

NM_176973 ⟹ NP_795947

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,047 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,065 (-)	NCBI
MGSCv37	6	88,792,552 - 88,824,038 (-)	RGD
Celera	6	90,780,757 - 90,812,060 (-)	RGD
cM Map	6		ENTREZGENE

Sequence:

show sequence

GCTTTCTCAGGGAAGATCGGAGCTGGGACCCTGTCCTAAGGAGCTTCCCTGGGTGCCTATGCAG
TGGGCGTGGATGAGCCTGGCCCCGAGGGCCTCACCTCCACGTCCCTGCTGGACCTCTTGTTGCC
CACTGACTTTGAGCCACTGGACTCAGAGGAACCCAGCGAGGCCATGGGTCTAGACGCCGGCCTA
GCCCCAGGCTCGGGCTTCCCCAGTGAGGACAGCGAGGAGTCCCGGCTCCTGCAGCCGCCACAGT
ACTTCTGGGAAGAAGAGGAACTAAACGGCTCCAGCCTGGACCTGGGTCCCACTGCAGACTACGT
CTTCCCAGACCTGACTGAGAAGGTGGCGTCCATGGAAGACCCAGGCCAGGCTCCGGACCTGCCA
AACCTCCCCTCCATCCTGCCCAAGATGGATCTTGCTGAGCCTCCCTGGCATATGCCTCTGCAGG
AGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAAGGGAAGAAGAGGAGAGGGAGAAGGAAGC
AGAGGAGGAGGAGGAAGAGGAAGAGCTGCTCCCTGTGAGCGGGTCCCCAGGAGCCACCGCACAG
GCCCATGCCCCTTCACCTAGCACCAGCAGCAGCACCAGCAGCCAGAGTCCTGGGGCCACCCGGC
ACAGGCAGGAGGATTCTGGAGACCAGGCCACATCAGGCATGGAAGTGGAGAGCAGTGTGAAACC
CACCTTGTCAGTGCCCTCAGTCACCCCAAGTACAGTGGCCCCGGGGGTTCAGAACTATAGCCAG
GAGTCTGGGGGCACTGAGTGGCCAACTGGGGGGCTGGGGGTCCAGTCTGAGGTTCCCCAGGGAG
CTGGTGAGGGGGCCACAGTGGGAGCAGCTGACTTCGATGGCCAGCAGGGGGCACTGCCGTCCTC
TTCACTCCCACAAACAGTGCCTCCAAGTGGGACTGAGGTCCCCAGTGAGGGTCCCCTTTACCCC
AGAATCCCAGACTCTCTCCCACCTGGACCCCAAGACACAGAGTCAACCCCTTCCTCTGCTACCT
GGGGACAAGAAGGTCTCAGTGAGCAGCCCCTGGAGGGTCAGGCAGCTGAAGCTCACTCACTAAC
ACCGTGGGACTCTACTCAGGTGATCTGCAAGGATTGGAGCAACCTGGCCGGGAAGAGCTACATC
ATCCTGAACATGACAGAGAACATAGACTGTGAAGTATTTCGGCGGCACCGGGGACTACGGCTCC
TAGCTCTGGTGGAGGAGGTACTGCCACGCCACCGCAGTGGCCATCGTGGAGACTGGCATATTTC
TCTGAGCAAGCCCAGTGAGAAAGAGCAACACCTGCTGATGACCCTTGTAGGAGAACAGGGCGTG
GTACCCACTCAAGATGTCCTTTCCATGCTCAGTGGCATCCGCAGGAGTCTGGAGGAGATTGGCA
TCCAGAACTACTCCACCACCAGCAGCTGCCAGGCACGAGCCACCCAGGTGCGCAGTGACTACGG
GACGCTCTTTGTAGTGCTGGTGATCATTGGTGTCATCTGCTTCATCATCATTGTGCTTGGCCTA
CTCTACAATTGTTGGCAGCGCCGGATGCCCAAGCTCAAACACGTGTCGCACGGTGAGGAGCTGC
GCTTCGTGGAGAACGGCTGCCACGACAATCCCACGCTGGACGTGGCCAGCGACAGCCAGTCGGA
GATGCAGGAGAAGCAGCCCAGCCTGAACGGTGGGGCCATCAACGGCCCGAGCAGCTGGAGCGCG
CTCATGGGCAGCAAACGCGACCCTGAGGACTCGGACGTGTTCGAGGAGGACACTCACCTGTGAG
CGCCGGGCCACGGGCGCGAGACTGCCCGACGCCACGGCCCCGCGCCCCTCCCGGTCCTCCACGC
GGACCACTATGCTTCCCCACCGCAGCAGGCGACCGCGGCGCAGCTCCCACCCCGCCCTGCCCGG
CCCCGAGCGCTTGCCCGAGGCCAGCGCGCTCCCCGCGCCAGGACTCCATTAAAGCCGCTAAGAC
GCGCGGGCCGCTCCGCAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NR_166540

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,852,028 (-)	NCBI
GRCm38	6	88,842,557 - 88,875,046 (-)	NCBI

RefSeq Acc Id:

XM_011241375 ⟹ XP_011239677

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,995 (-)	NCBI
GRCm38	6	88,842,557 - 88,875,008 (-)	NCBI

Sequence:

show sequence

GCTGCGGCTGCGGGCGGCAACGCTGCACCATGGCCCGGCCGCTGCGGGCCGCCCGACTGCCGCC
GCCGCTGCTGTTGCTGCTGGCCGCCGGTGAGTGGGGCCGGGCCAAGCCGCGAGGGCGCAGCGCG
CCACGGGCCAGTGCTGGCAGCGCCGCAGAACAAAGGCTGTGGGGCGCGCGGGGTCGGCCGCGCG
CGGGGAGGAGGCGGCGGCGCGGGGCCTGGCGCGGGGACCCCCCAGGCGCCCTGTCCTGGGCGCT
GGATGCTCCGTGCCACGCGCGCGCTCGAGGACGGCGGCGGCGGGGCCGCTGCACCAGGGTGTCC
GCGCCCCACCCCTCGCCAGGTGACAGGTGACAGGTGACCAGTCTGCGGCCAAGGAGCAGAGGGG
CGTGTGCGTGTGTGCGCGCGAGGGTGTAGAGAAGCTCAGCAGGGAGGCGAGAGCGCACGGGTGA
CACCCTTGGAGAAATCGCATCGTAAAGGTCCGGCGGGTACCCAAAGCGCGTGGGCCGGGGATGC
CGAGGGCCGAGAAAGAAAGAGCTGCGTGGCCGAGGTGGATGTTTACATGTGCGTGGAGCTTGCC
TGGGAAGGCGTGTGCGTGTCGTTGTGAACGCGTGTCCTCGACTGCGCGGGGCAACTTTATTAGG
AGCTGACAAAGGGGAGCTTCCCTGGGTGCCTATGCAGTGGGCGTGGATGAGCCTGGCCCCGAGG
GCCTCACCTCCACGTCCCTGCTGGACCTCTTGTTGCCCACTGACTTTGAGCCACTGGACTCAGA
GGAACCCAGCGAGGCCATGGGTCTAGACGCCGGCCTAGCCCCAGGCTCGGGCTTCCCCAGTGAG
GACAGCGAGGAGTCCCGGCTCCTGCAGCCGCCACAGTACTTCTGGGAAGAAGAGGAACTAAACG
GCTCCAGCCTGGACCTGGGTCCCACTGCAGACTACGTCTTCCCAGACCTGACTGAGAAGGTGGC
GTCCATGGAAGACCCAGGCCAGGCTCCGGACCTGCCAAACCTCCCCTCCATCCTGCCCAAGATG
GATCTTGCTGAGCCTCCCTGGCATATGCCTCTGCAGGAGGAGGAAGAGGAGGAGGAAGAGGAGG
AGGAGGAAAGGGAAGAAGAGGAGAGGGAGAAGGAAGCAGAGGAGGAGGAGGAAGAGGAAGAGCT
GCTCCCTGTGAGCGGGTCCCCAGGAGCCACCGCACAGGCCCATGCCCCTTCACCTAGCACCAGC
AGCAGCACCAGCAGCCAGAGTCCTGGGGCCACCCGGCACAGGCAGGAGGATTCTGGAGACCAGG
CCACATCAGGCATGGAAGTGGAGAGCAGTGTGAAACCCACCTTGTCAGTGCCCTCAGTCACCCC
AAGTACAGTGGCCCCGGGGGTTCAGAACTATAGCCAGGAGTCTGGGGGCACTGAGTGGCCAACT
GGGGGGCTGGGGGTCCAGTCTGAGGTTCCCCAGGGAGCTGGTGAGGGGGCCACAGTGGGAGCAG
CTGACTTCGATGGCCAGCAGGGGGCACTGCCGTCCTCTTCACTCCCACAAACAGTGCCTCCAAG
TGGGACTGAGGTCCCCAGTGAGGGTCCCCTTTACCCCAGAATCCCAGACTCTCTCCCACCTGGA
CCCCAAGACACAGAGTCAACCCCTTCCTCTGCTACCTGGGGACAAGAAGGTCTCAGTGAGCAGC
CCCTGGAGGGTCAGGCAGCTGAAGCTCACTCACTAACACCGTGGGACTCTACTCAGGTGATCTG
CAAGGATTGGAGCAACCTGGCCGGGAAGAGCTACATCATCCTGAACATGACAGAGAACATAGAC
TGTGAAGTATTTCGGCGGCACCGGGGACTACGGCTCCTAGCTCTGGTGGAGGAGGTACTGCCAC
GCCACCGCAGTGGCCATCGTGGAGACTGGCATATTTCTCTGAGCAAGCCCAGTGAGAAAGAGCA
ACACCTGCTGATGACCCTTGTAGGAGAACAGGGCGTGGTACCCACTCAAGATGTCCTTTCCATG
CTCAGTGGCATCCGCAGGAGTCTGGAGGAGATTGGCATCCAGAACTACTCCACCACCAGCAGCT
GCCAGGCACGAGCCACCCAGGTGCGCAGTGACTACGGGACGCTCTTTGTAGTGCTGGTGATCAT
TGGTGTCATCTGCTTCATCATCATTGTGCTTGGCCTACTCTACAATTGTTGGCAGCGCCGGATG
CCCAAGCTCAAACACGTGCGCTCTCTCCTGCTGCTGCAGTCGCACGGTGAGGAGCTGCGCTTCG
TGGAGAACGGCTGCCACGACAATCCCACGCTGGACGTGGCCAGCGACAGCCAGTCGGAGATGCA
GGAGAAGCAGCCCAGCCTGAACGGTGGGGCCATCAACGGCCCGAGCAGCTGGAGCGCGCTCATG
GGCAGCAAACGCGACCCTGAGGACTCGGACGTGTTCGAGGAGGACACTCACCTGTGAGCGCCGG
GCCACGGGCGCGAGACTGCCCGACGCCACGGCCCCGCGCCCCTCCCGGTCCTCCACGCGGACCA
CTATGCTTCCCCACCGCAGCAGGCGACCGCGGCGCAGCTCCCACCCCGCCCTGCCCGGCCCCGA
GCGCTTGCCCGAGGCCAGCGCGCTCCCCGCGCCAGGACTCCATTAAAGCCGCTAAGACGCGCGG
GCCGCTCCGCC

hide sequence

RefSeq Acc Id:

XM_011241376 ⟹ XP_011239678

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,099 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,117 (-)	NCBI

Sequence:

show sequence

CAAGCCGCCACCACAGAAGGGGAGGGAGGAAGGCTGACTGCAAAGGTGGGTCAGACCAGGACAT
GGGAGAGCAGCTTTCTCAGGGAAGATCGGAGCTGGGACCCTGTCCTAAGGAGCTTCCCTGGGTG
CCTATGCAGTGGGCGTGGATGAGCCTGGCCCCGAGGGCCTCACCTCCACGTCCCTGCTGGACCT
CTTGTTGCCCACTGACTTTGAGCCACTGGACTCAGAGGAACCCAGCGAGGCCATGGGTCTAGAC
GCCGGCCTAGCCCCAGGCTCGGGCTTCCCCAGTGAGGACAGCGAGGAGTCCCGGCTCCTGCAGC
CGCCACAGTACTTCTGGGAAGAAGAGGAACTAAACGGCTCCAGCCTGGACCTGGGTCCCACTGC
AGACTACGTCTTCCCAGACCTGACTGAGAAGGTGGCGTCCATGGAAGACCCAGGCCAGGCTCCG
GACCTGCCAAACCTCCCCTCCATCCTGCCCAAGATGGATCTTGCTGAGCCTCCCTGGCATATGC
CTCTGCAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAAGGGAAGAAGAGGAGAGGGA
GAAGGAAGCAGAGGAGGAGGAGGAAGAGGAAGAGCTGCTCCCTGTGAGCGGGTCCCCAGGAGCC
ACCGCACAGGCCCATGCCCCTTCACCTAGCACCAGCAGCAGCACCAGCAGCCAGAGTCCTGGGG
CCACCCGGCACAGGCAGGAGGATTCTGGAGACCAGGCCACATCAGGCATGGAAGTGGAGAGCAG
TGTGAAACCCACCTTGTCAGTGCCCTCAGTCACCCCAAGTACAGTGGCCCCGGGGGTTCAGAAC
TATAGCCAGGAGTCTGGGGGCACTGAGTGGCCAACTGGGGGGCTGGGGGTCCAGTCTGAGGTTC
CCCAGGGAGCTGGTGAGGGGGCCACAGTGGGAGCAGCTGACTTCGATGGCCAGCAGGGGGCACT
GCCGTCCTCTTCACTCCCACAAACAGTGCCTCCAAGTGGGACTGAGGTCCCCAGTGAGGGTCCC
CTTTACCCCAGAATCCCAGACTCTCTCCCACCTGGACCCCAAGACACAGAGTCAACCCCTTCCT
CTGCTACCTGGGGACAAGAAGGTCTCAGTGAGCAGCCCCTGGAGGGTCAGGCAGCTGAAGCTCA
CTCACTAACACCGTGGGACTCTACTCAGGTGATCTGCAAGGATTGGAGCAACCTGGCCGGGAAG
AGCTACATCATCCTGAACATGACAGAGAACATAGACTGTGAAGTATTTCGGCGGCACCGGGGAC
TACGGCTCCTAGCTCTGGTGGAGGAGGTACTGCCACGCCACCGCAGTGGCCATCGTGGAGACTG
GCATATTTCTCTGAGCAAGCCCAGTGAGAAAGAGCAACACCTGCTGATGACCCTTGTAGGAGAA
CAGGGCGTGGTACCCACTCAAGATGTCCTTTCCATGCTCAGTGGCATCCGCAGGAGTCTGGAGG
AGATTGGCATCCAGAACTACTCCACCACCAGCAGCTGCCAGGCACGAGCCACCCAGGTGCGCAG
TGACTACGGGACGCTCTTTGTAGTGCTGGTGATCATTGGTGTCATCTGCTTCATCATCATTGTG
CTTGGCCTACTCTACAATTGTTGGCAGCGCCGGATGCCCAAGCTCAAACACGTGCGCTCTCTCC
TGCTGCTGCAGTCGCACGGTGAGGAGCTGCGCTTCGTGGAGAACGGCTGCCACGACAATCCCAC
GCTGGACGTGGCCAGCGACAGCCAGTCGGAGATGCAGGAGAAGCAGCCCAGCCTGAACGGTGGG
GCCATCAACGGCCCGAGCAGCTGGAGCGCGCTCATGGGCAGCAAACGCGACCCTGAGGACTCGG
ACGTGTTCGAGGAGGACACTCACCTGTGAGCGCCGGGCCACGGGCGCGAGACTGCCCGACGCCA
CGGCCCCGCGCCCCTCCCGGTCCTCCACGCGGACCACTATGCTTCCCCACCGCAGCAGGCGACC
GCGGCGCAGCTCCCACCCCGCCCTGCCCGGCCCCGAGCGCTTGCCCGAGGCCAGCGCGCTCCCC
GCGCCAGGACTCCATTAAAGCCGCTAAGACGCGCGGGCCGCTCCGCC

hide sequence

RefSeq Acc Id:

XM_030255445 ⟹ XP_030111305

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,784 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,802 (-)	NCBI

Sequence:

show sequence

CGGCGCGGGGCCTGGCGCGGGGACCCCCCAGGCGCCCTGTCCTGGGCGCTGGATGCTCCGTGCC
ACGCGCGCGCTCGAGGACGGCGGCGGCGGGGCCGCTGCACCAGGGTGTCCGCGCCCCACCCCTC
GCCAGGTGACAGGAGCTTCCCTGGGTGCCTATGCAGTGGGCGTGGATGAGCCTGGCCCCGAGGG
CCTCACCTCCACGTCCCTGCTGGACCTCTTGTTGCCCACTGACTTTGAGCCACTGGACTCAGAG
GAACCCAGCGAGGCCATGGGTCTAGACGCCGGCCTAGCCCCAGGCTCGGGCTTCCCCAGTGAGG
ACAGCGAGGAGTCCCGGCTCCTGCAGCCGCCACAGTACTTCTGGGAAGAAGAGGAACTAAACGG
CTCCAGCCTGGACCTGGGTCCCACTGCAGACTACGTCTTCCCAGACCTGACTGAGAAGGTGGCG
TCCATGGAAGACCCAGGCCAGGCTCCGGACCTGCCAAACCTCCCCTCCATCCTGCCCAAGATGG
ATCTTGCTGAGCCTCCCTGGCATATGCCTCTGCAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGA
GGAGGAAAGGGAAGAAGAGGAGAGGGAGAAGGAAGCAGAGGAGGAGGAGGAAGAGGAAGAGCTG
CTCCCTGTGAGCGGGTCCCCAGGAGCCACCGCACAGGCCCATGCCCCTTCACCTAGCACCAGCA
GCAGCACCAGCAGCCAGAGTCCTGGGGCCACCCGGCACAGGCAGGAGGATTCTGGAGACCAGGC
CACATCAGGCATGGAAGTGGAGAGCAGTGTGAAACCCACCTTGTCAGTGCCCTCAGTCACCCCA
AGTACAGTGGCCCCGGGGGTTCAGAACTATAGCCAGGAGTCTGGGGGCACTGAGTGGCCAACTG
GGGGGCTGGGGGTCCAGTCTGAGGTTCCCCAGGGAGCTGGTGAGGGGGCCACAGTGGGAGCAGC
TGACTTCGATGGCCAGCAGGGGGCACTGCCGTCCTCTTCACTCCCACAAACAGTGCCTCCAAGT
GGGACTGAGGTCCCCAGTGAGGGTCCCCTTTACCCCAGAATCCCAGACTCTCTCCCACCTGGAC
CCCAAGACACAGAGTCAACCCCTTCCTCTGCTACCTGGGGACAAGAAGGTCTCAGTGAGCAGCC
CCTGGAGGGTCAGGCAGCTGAAGCTCACTCACTAACACCGTGGGACTCTACTCAGGTGATCTGC
AAGGATTGGAGCAACCTGGCCGGGAAGAGCTACATCATCCTGAACATGACAGAGAACATAGACT
GTGAAGTATTTCGGCGGCACCGGGGACTACGGCTCCTAGCTCTGGTGGAGGAGGTACTGCCACG
CCACCGCAGTGGCCATCGTGGAGACTGGCATATTTCTCTGAGCAAGCCCAGTGAGAAAGAGCAA
CACCTGCTGATGACCCTTGTAGGAGAACAGGGCGTGGTACCCACTCAAGATGTCCTTTCCATGC
TCAGTGGCATCCGCAGGAGTCTGGAGGAGATTGGCATCCAGAACTACTCCACCACCAGCAGCTG
CCAGGCACGAGCCACCCAGGTGCGCAGTGACTACGGGACGCTCTTTGTAGTGCTGGTGATCATT
GGTGTCATCTGCTTCATCATCATTGTGCTTGGCCTACTCTACAATTGTTGGCAGCGCCGGATGC
CCAAGCTCAAACACGTGCGCTCTCTCCTGCTGCTGCAGTCGCACGGTGAGGAGCTGCGCTTCGT
GGAGAACGGCTGCCACGACAATCCCACGCTGGACGTGGCCAGCGACAGCCAGTCGGAGATGCAG
GAGAAGCAGCCCAGCCTGAACGGTGGGGCCATCAACGGCCCGAGCAGCTGGAGCGCGCTCATGG
GCAGCAAACGCGACCCTGAGGACTCGGACGTGTTCGAGGAGGACACTCACCTGTGAGCGCCGGG
CCACGGGCGCGAGACTGCCCGACGCCACGGCCCCGCGCCCCTCCCGGTCCTCCACGCGGACCAC
TATGCTTCCCCACCGCAGCAGGCGACCGCGGCGCAGCTCCCACCCCGCCCTGCCCGGCCCCGAG
CGCTTGCCCGAGGCCAGCGCGCTCCCCGCGCCAGGACTCCATTAAAGCCGCTAAGACGCGCGGG
CCGCTCCGCC

hide sequence

RefSeq Acc Id:

XM_030255447 ⟹ XP_030111307

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,799 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,815 (-)	NCBI

Sequence:

show sequence

GGGGAGGAGGCGGCGGCGCGGGGCCTGGCGCGGGGACCCCCCAGGCGCCCTGTCCTGGGCGCTG
GATGCTCCGTGCCACGCGCGCGCTCGAGGACGGCGGCGGCGGGGCCGCTGCACCAGGGTGTCCG
CGCCCCACCCCTCGCCAGGTGACAGGTGACAGGTGACCAGTCTGCGGCCAAGGAGCAGAGGGGC
GTGTGCGTGTGTGCGCGCGAGGGTGTAGAGAAGCTCAGCAGGGAGGCGAGAGCGCACGGGTGAC
ACCCTTGGAGAAATCGCATCGTAAAGGAGCTTCCCTGGGTGCCTATGCAGTGGGCGTGGATGAG
CCTGGCCCCGAGGGCCTCACCTCCACGTCCCTGCTGGACCTCTTGTTGCCCACTGACTTTGAGC
CACTGGACTCAGAGGAACCCAGCGAGGCCATGGGTCTAGACGCCGGCCTAGCCCCAGGCTCGGG
CTTCCCCAGTGAGGACAGCGAGGAGTCCCGGCTCCTGCAGCCGCCACAGTACTTCTGGGAAGAA
GAGGAACTAAACGGCTCCAGCCTGGACCTGGGTCCCACTGCAGACTACGTCTTCCCAGACCTGA
CTGAGAAGGTGGCGTCCATGGAAGACCCAGGCCAGGCTCCGGACCTGCCAAACCTCCCCTCCAT
CCTGCCCAAGATGGATCTTGCTGAGCCTCCCTGGCATATGCCTCTGCAGGAGGAGGAAGAGGAG
GAGGAAGAGGAGGAGGAGGAAAGGGAAGAAGAGGAGAGGGAGAAGGAAGCAGAGGAGGAGGAGG
AAGAGGAAGAGCTGCTCCCTGTGAGCGGGTCCCCAGGAGCCACCGCACAGGCCCATGCCCCTTC
ACCTAGCACCAGCAGCAGCACCAGCAGCCAGAGTCCTGGGGCCACCCGGCACAGGCAGGAGGAT
TCTGGAGACCAGGCCACATCAGGCATGGAAGTGGAGAGCAGTGTGAAACCCACCTTGTCAGTGC
CCTCAGTCACCCCAAGTACAGTGGCCCCGGGGGTTCAGAACTATAGCCAGGAGTCTGGGGGCAC
TGAGTGGCCAACTGGGGGGCTGGGGGTCCAGTCTGAGGTTCCCCAGGGAGCTGGTGAGGGGGCC
ACAGTGGGAGCAGCTGACTTCGATGGCCAGCAGGGGGCACTGCCGTCCTCTTCACTCCCACAAA
CAGTGCCTCCAAGTGGGACTGAGGTCCCCAGTGAGGGTCCCCTTTACCCCAGAATCCCAGACTC
TCTCCCACCTGGACCCCAAGACACAGAGTCAACCCCTTCCTCTGCTACCTGGGGACAAGAAGGT
CTCAGTGAGCAGCCCCTGGAGGGTCAGGCAGCTGAAGCTCACTCACTAACACCGTGGGACTCTA
CTCAGGTGATCTGCAAGGATTGGAGCAACCTGGCCGGGAAGAGCTACATCATCCTGAACATGAC
AGAGAACATAGACTGTGAAGTATTTCGGCGGCACCGGGGACTACGGCTCCTAGCTCTGGTGGAG
GAGGTACTGCCACGCCACCGCAGTGGCCATCGTGGAGACTGGCATATTTCTCTGAGCAAGCCCA
GTGAGAAAGAGCAACACCTGCTGATGACCCTTGTAGGAGAACAGGGCGTGGTACCCACTCAAGA
TGTCCTTTCCATGCTCAGTGGCATCCGCAGGAGTCTGGAGGAGATTGGCATCCAGAACTACTCC
ACCACCAGCAGCTGCCAGGCACGAGCCACCCAGGTGCGCAGTGACTACGGGACGCTCTTTGTAG
TGCTGGTGATCATTGGTGTCATCTGCTTCATCATCATTGTGCTTGGCCTACTCTACAATTGTTG
GCAGCGCCGGATGCCCAAGCTCAAACACGTGCGCTCTCTCCTGCTGCTGCAGTCGCACGGTGAG
GAGCTGCGCTTCGTGGAGAACGGCTGCCACGACAATCCCACGCTGGACGTGGCCAGCGACAGCC
AGTCGGAGATGCAGGAGAAGCAGCCCAGCCTGAACGGTGGGGCCATCAACGGCCCGAGCAGCTG
GAGCGCGCTCATGGGCAGCAAACGCGACCCTGAGGACTCGGACGTGTTCGAGGAGGACACTCAC
CTGTGAGCGCCGGGCCACGGGCGCGAGACTGCCCGACGCCACGGCCCCGCGCCCCTCCCGGTCC
TCCACGCGGACCACTATGCTTCCCCACCGCAGCAGGCGACCGCGGCGCAGCTCCCACCCCGCCC
TGCCCGGCCCCGAGCGCTTGCCCGAGGCCAGCGCGCTCCCCGCGCCAGGACTCCATTAAAGCCG
CTAAGACGCGCGGGCCGCTCCGCC

hide sequence

RefSeq Acc Id:

XM_030255448 ⟹ XP_030111308

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,851,807 (-)	NCBI
GRCm38	6	88,842,557 - 88,874,810 (-)	NCBI

Sequence:

show sequence

GGAGGCGGCGGCGCGGGGCCTGGCGCGGGGACCCCCCAGGCGCCCTGTCCTGGGCGCTGGATGC
TCCGTGCCACGCGCGCGCTCGAGGACGGCGGCGGCGGGGCCGCTGCACCAGGGTGTCCGCGCCC
CACCCCTCGCCAGGTGACAGGTGACAGGAGCTTCCCTGGGTGCCTATGCAGTGGGCGTGGATGA
GCCTGGCCCCGAGGGCCTCACCTCCACGTCCCTGCTGGACCTCTTGTTGCCCACTGACTTTGAG
CCACTGGACTCAGAGGAACCCAGCGAGGCCATGGGTCTAGACGCCGGCCTAGCCCCAGGCTCGG
GCTTCCCCAGTGAGGACAGCGAGGAGTCCCGGCTCCTGCAGCCGCCACAGTACTTCTGGGAAGA
AGAGGAACTAAACGGCTCCAGCCTGGACCTGGGTCCCACTGCAGACTACGTCTTCCCAGACCTG
ACTGAGAAGGTGGCGTCCATGGAAGACCCAGGCCAGGCTCCGGACCTGCCAAACCTCCCCTCCA
TCCTGCCCAAGATGGATCTTGCTGAGCCTCCCTGGCATATGCCTCTGCAGGAGGAGGAAGAGGA
GGAGGAAGAGGAGGAGGAGGAAAGGGAAGAAGAGGAGAGGGAGAAGGAAGCAGAGGAGGAGGAG
GAAGAGGAAGAGCTGCTCCCTGTGAGCGGGTCCCCAGGAGCCACCGCACAGGCCCATGCCCCTT
CACCTAGCACCAGCAGCAGCACCAGCAGCCAGAGTCCTGGGGCCACCCGGCACAGGCAGGAGGA
TTCTGGAGACCAGGCCACATCAGGCATGGAAGTGGAGAGCAGTGTGAAACCCACCTTGTCAGTG
CCCTCAGTCACCCCAAGTACAGTGGCCCCGGGGGTTCAGAACTATAGCCAGGAGTCTGGGGGCA
CTGAGTGGCCAACTGGGGGGCTGGGGGTCCAGTCTGAGGTTCCCCAGGGAGCTGGTGAGGGGGC
CACAGTGGGAGCAGCTGACTTCGATGGCCAGCAGGGGGCACTGCCGTCCTCTTCACTCCCACAA
ACAGTGCCTCCAAGTGGGACTGAGGTCCCCAGTGAGGGTCCCCTTTACCCCAGAATCCCAGACT
CTCTCCCACCTGGACCCCAAGACACAGAGTCAACCCCTTCCTCTGCTACCTGGGGACAAGAAGG
TCTCAGTGAGCAGCCCCTGGAGGGTCAGGCAGCTGAAGCTCACTCACTAACACCGTGGGACTCT
ACTCAGGTGATCTGCAAGGATTGGAGCAACCTGGCCGGGAAGAGCTACATCATCCTGAACATGA
CAGAGAACATAGACTGTGAAGTATTTCGGCGGCACCGGGGACTACGGCTCCTAGCTCTGGTGGA
GGAGGTACTGCCACGCCACCGCAGTGGCCATCGTGGAGACTGGCATATTTCTCTGAGCAAGCCC
AGTGAGAAAGAGCAACACCTGCTGATGACCCTTGTAGGAGAACAGGGCGTGGTACCCACTCAAG
ATGTCCTTTCCATGCTCAGTGGCATCCGCAGGAGTCTGGAGGAGATTGGCATCCAGAACTACTC
CACCACCAGCAGCTGCCAGGCACGAGCCACCCAGGTGCGCAGTGACTACGGGACGCTCTTTGTA
GTGCTGGTGATCATTGGTGTCATCTGCTTCATCATCATTGTGCTTGGCCTACTCTACAATTGTT
GGCAGCGCCGGATGCCCAAGCTCAAACACGTGCGCTCTCTCCTGCTGCTGCAGTCGCACGGTGA
GGAGCTGCGCTTCGTGGAGAACGGCTGCCACGACAATCCCACGCTGGACGTGGCCAGCGACAGC
CAGTCGGAGATGCAGGAGAAGCAGCCCAGCCTGAACGGTGGGGCCATCAACGGCCCGAGCAGCT
GGAGCGCGCTCATGGGCAGCAAACGCGACCCTGAGGACTCGGACGTGTTCGAGGAGGACACTCA
CCTGTGAGCGCCGGGCCACGGGCGCGAGACTGCCCGACGCCACGGCCCCGCGCCCCTCCCGGTC
CTCCACGCGGACCACTATGCTTCCCCACCGCAGCAGGCGACCGCGGCGCAGCTCCCACCCCGCC
CTGCCCGGCCCCGAGCGCTTGCCCGAGGCCAGCGCGCTCCCCGCGCCAGGACTCCATTAAAGCC
GCTAAGACGCGCGGGCCGCTCCGCC

hide sequence

RefSeq Acc Id:

XM_036166218 ⟹ XP_036022111

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,852,063 (-)	NCBI

RefSeq Acc Id:

XR_004942963

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,852,063 (-)	NCBI

RefSeq Acc Id:

XR_004942964

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	88,819,539 - 88,852,063 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001334256	(Get FASTA)	NCBI Sequence Viewer
	NP_001351504	(Get FASTA)	NCBI Sequence Viewer
	NP_001366146	(Get FASTA)	NCBI Sequence Viewer
	NP_001366147	(Get FASTA)	NCBI Sequence Viewer
	NP_001366148	(Get FASTA)	NCBI Sequence Viewer
	NP_001366149	(Get FASTA)	NCBI Sequence Viewer
	NP_001366150	(Get FASTA)	NCBI Sequence Viewer
	NP_001366151	(Get FASTA)	NCBI Sequence Viewer
	NP_001366152	(Get FASTA)	NCBI Sequence Viewer
	NP_795947	(Get FASTA)	NCBI Sequence Viewer
	XP_011239677	(Get FASTA)	NCBI Sequence Viewer
	XP_011239678	(Get FASTA)	NCBI Sequence Viewer
	XP_030111305	(Get FASTA)	NCBI Sequence Viewer
	XP_030111307	(Get FASTA)	NCBI Sequence Viewer
	XP_030111308	(Get FASTA)	NCBI Sequence Viewer
	XP_036022111	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH33384	(Get FASTA)	NCBI Sequence Viewer
	BAC30176	(Get FASTA)	NCBI Sequence Viewer
	EDK99258	(Get FASTA)	NCBI Sequence Viewer
	Q8CAE9	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_795947 ⟸ NM_176973
- Peptide Label:	isoform 2
- UniProtKB:	Q8CAE9 (UniProtKB/Swiss-Prot), G3X9D3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGLDAGLAPGSGFPSEDSEESRLLQPPQYFWEEEELNGSSLDLGPTADYVFPDLTEKVASMEDP GQAPDLPNLPSILPKMDLAEPPWHMPLQEEEEEEEEEEEEREEEEREKEAEEEEEEEELLPVSG SPGATAQAHAPSPSTSSSTSSQSPGATRHRQEDSGDQATSGMEVESSVKPTLSVPSVTPSTVAP GVQNYSQESGGTEWPTGGLGVQSEVPQGAGEGATVGAADFDGQQGALPSSSLPQTVPPSGTEVP SEGPLYPRIPDSLPPGPQDTESTPSSATWGQEGLSEQPLEGQAAEAHSLTPWDSTQVICKDWSN LAGKSYIILNMTENIDCEVFRRHRGLRLLALVEEVLPRHRSGHRGDWHISLSKPSEKEQHLLMT LVGEQGVVPTQDVLSMLSGIRRSLEEIGIQNYSTTSSCQARATQVRSDYGTLFVVLVIIGVICF IIIVLGLLYNCWQRRMPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGAIN GPSSWSALMGSKRDPEDSDVFEEDTHL hide sequence

RefSeq Acc Id:

XP_011239677 ⟸ XM_011241375

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGLDAGLAPGSGFPSEDSEESRLLQPPQYFWEEEELNGSSLDLGPTADYVFPDLTEKVASMEDP
GQAPDLPNLPSILPKMDLAEPPWHMPLQEEEEEEEEEEEEREEEEREKEAEEEEEEEELLPVSG
SPGATAQAHAPSPSTSSSTSSQSPGATRHRQEDSGDQATSGMEVESSVKPTLSVPSVTPSTVAP
GVQNYSQESGGTEWPTGGLGVQSEVPQGAGEGATVGAADFDGQQGALPSSSLPQTVPPSGTEVP
SEGPLYPRIPDSLPPGPQDTESTPSSATWGQEGLSEQPLEGQAAEAHSLTPWDSTQVICKDWSN
LAGKSYIILNMTENIDCEVFRRHRGLRLLALVEEVLPRHRSGHRGDWHISLSKPSEKEQHLLMT
LVGEQGVVPTQDVLSMLSGIRRSLEEIGIQNYSTTSSCQARATQVRSDYGTLFVVLVIIGVICF
IIIVLGLLYNCWQRRMPKLKHVRSLLLLQSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPS
LNGGAINGPSSWSALMGSKRDPEDSDVFEEDTHL

hide sequence

RefSeq Acc Id:

XP_011239678 ⟸ XM_011241376

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGLDAGLAPGSGFPSEDSEESRLLQPPQYFWEEEELNGSSLDLGPTADYVFPDLTEKVASMEDP
GQAPDLPNLPSILPKMDLAEPPWHMPLQEEEEEEEEEEEEREEEEREKEAEEEEEEEELLPVSG
SPGATAQAHAPSPSTSSSTSSQSPGATRHRQEDSGDQATSGMEVESSVKPTLSVPSVTPSTVAP
GVQNYSQESGGTEWPTGGLGVQSEVPQGAGEGATVGAADFDGQQGALPSSSLPQTVPPSGTEVP
SEGPLYPRIPDSLPPGPQDTESTPSSATWGQEGLSEQPLEGQAAEAHSLTPWDSTQVICKDWSN
LAGKSYIILNMTENIDCEVFRRHRGLRLLALVEEVLPRHRSGHRGDWHISLSKPSEKEQHLLMT
LVGEQGVVPTQDVLSMLSGIRRSLEEIGIQNYSTTSSCQARATQVRSDYGTLFVVLVIIGVICF
IIIVLGLLYNCWQRRMPKLKHVRSLLLLQSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPS
LNGGAINGPSSWSALMGSKRDPEDSDVFEEDTHL

hide sequence

RefSeq Acc Id:	XP_030111307 ⟸ XM_030255447
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_030111308 ⟸ XM_030255448
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_030111305 ⟸ XM_030255445
- Peptide Label:	isoform X2

RefSeq Acc Id:	NP_001334256 ⟸ NM_001347327
- Peptide Label:	isoform 1 precursor
- UniProtKB:	D3YW47 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001351504 ⟸ NM_001364575
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001366146 ⟸ NM_001379217
- Peptide Label:	isoform 3 precursor

RefSeq Acc Id:	NP_001366148 ⟸ NM_001379219
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001366150 ⟸ NM_001379221
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001366149 ⟸ NM_001379220
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001366151 ⟸ NM_001379222
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001366152 ⟸ NM_001379223
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001366147 ⟸ NM_001379218
- Peptide Label:	isoform 4

RefSeq Acc Id:

ENSMUSP00000120460 ⟸ ENSMUST00000145780

RefSeq Acc Id:

ENSMUSP00000117954 ⟸ ENSMUST00000145944

RefSeq Acc Id:

ENSMUSP00000120870 ⟸ ENSMUST00000140455

RefSeq Acc Id:

ENSMUSP00000058985 ⟸ ENSMUST00000061262

RefSeq Acc Id:

ENSMUSP00000040417 ⟸ ENSMUST00000038409

RefSeq Acc Id:	XP_036022111 ⟸ XM_036166218
- Peptide Label:	isoform X1

Promoters

RGD ID:

6839769

Promoter ID:

MM_KWN:46830

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Kidney

Transcripts:

OTTMUST00000059572

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	88,793,241 - 88,793,741 (-)	MPROMDB

RGD ID:

6839765

Promoter ID:

MM_KWN:46831

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain

Transcripts:

OTTMUST00000059570

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	88,796,411 - 88,796,911 (-)	MPROMDB

RGD ID:

6838891

Promoter ID:

MM_KWN:46832

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain, ES_Cell

Transcripts:

OTTMUST00000059571, UC009CVV.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	88,797,511 - 88,799,012 (-)	MPROMDB

RGD ID:

6839767

Promoter ID:

MM_KWN:46833

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain

Transcripts:

OTTMUST00000059573

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	88,814,706 - 88,815,206 (-)	MPROMDB

RGD ID:

6839763

Promoter ID:

MM_KWN:46834

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain

Transcripts:

ENSMUST00000061262, ENSMUST00000089447, OTTMUST00000059564, OTTMUST00000059565, OTTMUST00000059566, OTTMUST00000059567, OTTMUST00000059568, OTTMUST00000059569

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	88,823,856 - 88,824,356 (-)	MPROMDB

RGD ID:

6890386

Promoter ID:

EPDNEW_M8644

Type:

initiation region

Name:

Podxl2_1

Description:

Mus musculus podocalyxin-like 2 , transcript variant 1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	6	88,875,046 - 88,875,106	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2442488	AgrOrtholog
Ensembl Genes	ENSMUSG00000033152	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000040417	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000058985	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000117954	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000120460	UniProtKB/TrEMBL
	ENSMUSP00000120870	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000038409	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUST00000061262	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUST00000140455	UniProtKB/TrEMBL
	ENSMUST00000145780	UniProtKB/TrEMBL
	ENSMUST00000145944	ENTREZGENE, UniProtKB/TrEMBL
InterPro	CD34/Podocalyxin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PODXL2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:319655	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:2442488	ENTREZGENE
NCBI Gene	319655	ENTREZGENE
PANTHER	PTHR15594	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	CD34_antigen	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Podxl2	PhenoGen
UniProt	D3YW47	ENTREZGENE, UniProtKB/TrEMBL
	D3YZ50_MOUSE	UniProtKB/TrEMBL
	G3X9D3	ENTREZGENE, UniProtKB/TrEMBL
	PDXL2_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	Q8CFW3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)