Lmo7 (LIM domain only 7) - Rat Genome Database

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Gene: Lmo7 (LIM domain only 7) Mus musculus
Analyze
Symbol: Lmo7
Name: LIM domain only 7
RGD ID: 1552223
MGI Page MGI
Description: Predicted to be involved in positive regulation of transcription by RNA polymerase II. Located in apical plasma membrane; cytoplasm; and nucleus. Is expressed in several structures, including brain; branchial arch; heart; sensory organ; and urinary system. Orthologous to human LMO7 (LIM domain 7).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C78582; FBXO2; FBXO20; Gm914; LIM domain only protein 7; mKIAA0858
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914101,967,353 - 102,172,144 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14101,967,393 - 102,172,146 (+)EnsemblGRCm39 Ensembl
GRCm3814101,729,928 - 101,934,708 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14101,729,957 - 101,934,710 (+)EnsemblGRCm38mm10GRCm38
MGSCv3714102,129,145 - 102,333,910 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614100,616,519 - 100,821,316 (+)NCBIMGSCv36mm8
Celera14100,369,410 - 100,570,067 (+)NCBICelera
Cytogenetic Map14E2.3NCBI
cM Map1450.9NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(S)-nicotine  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (ISO)
amphetamine  (ISO)
aristolochic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[k]fluoranthene  (EXP)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium dichloride  (ISO)
calcium silicate  (EXP)
carbon nanotube  (EXP)
chlordecone  (EXP)
choline  (EXP)
chromium(6+)  (EXP)
cisplatin  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP)
cycloheximide  (ISO)
cyclosporin A  (ISO)
diethyl maleate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
flurbiprofen  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
geldanamycin  (ISO)
hexadecanoic acid  (ISO)
hydrogen peroxide  (ISO)
irinotecan  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
levofloxacin  (ISO)
mercury dibromide  (ISO)
methamphetamine  (EXP)
methylmercury chloride  (ISO)
morphine  (EXP)
N,N-diethyl-m-toluamide  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
nicotine  (EXP)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
permethrin  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
toluene  (ISO)
topotecan  (ISO)
tremolite asbestos  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Systematic analysis and nomenclature of mammalian F-box proteins. Jin J, etal., Genes Dev 2004 Nov 1;18(21):2573-80.
3. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
4. Identification of FGF10 targets in the embryonic lung epithelium during bud morphogenesis. Lu J, etal., J Biol Chem 2005 Feb 11;280(6):4834-41. Epub 2004 Nov 19.
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11829485   PMID:12466851   PMID:12477932   PMID:12761045   PMID:14610273   PMID:15747579   PMID:16137664  
PMID:16141072   PMID:16141073   PMID:16498405   PMID:16944949   PMID:18287559   PMID:18799693   PMID:19035355   PMID:19215226   PMID:20932939   PMID:21267068   PMID:21525034   PMID:22988430  
PMID:23055939   PMID:24825363   PMID:26157009   PMID:30586711   PMID:30850599   PMID:33629329   PMID:34884689  


Genomics

Comparative Map Data
Lmo7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914101,967,353 - 102,172,144 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14101,967,393 - 102,172,146 (+)EnsemblGRCm39 Ensembl
GRCm3814101,729,928 - 101,934,708 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14101,729,957 - 101,934,710 (+)EnsemblGRCm38mm10GRCm38
MGSCv3714102,129,145 - 102,333,910 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614100,616,519 - 100,821,316 (+)NCBIMGSCv36mm8
Celera14100,369,410 - 100,570,067 (+)NCBICelera
Cytogenetic Map14E2.3NCBI
cM Map1450.9NCBI
LMO7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381375,620,434 - 75,859,870 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1375,620,434 - 75,859,870 (+)EnsemblGRCh38hg38GRCh38
GRCh371376,194,570 - 76,434,006 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361375,092,571 - 75,332,003 (+)NCBINCBI36Build 36hg18NCBI36
Build 341375,092,570 - 75,332,002NCBI
Celera1357,092,445 - 57,331,882 (+)NCBICelera
Cytogenetic Map13q22.2NCBI
HuRef1356,891,721 - 57,131,153 (+)NCBIHuRef
CHM1_11376,162,285 - 76,401,623 (+)NCBICHM1_1
T2T-CHM13v2.01374,844,083 - 75,083,598 (+)NCBIT2T-CHM13v2.0
Lmo7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21578,567,029 - 78,769,833 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1578,567,023 - 78,769,783 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01586,242,911 - 86,458,512 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1586,243,148 - 86,457,739 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01587,780,294 - 87,997,103 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41585,710,975 - 85,928,469 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11585,726,754 - 85,944,249 (+)NCBI
Celera1577,758,335 - 77,960,326 (+)NCBICelera
Cytogenetic Map15q21NCBI
Lmo7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540431,196,312 - 31,388,258 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540431,197,156 - 31,388,571 (-)NCBIChiLan1.0ChiLan1.0
LMO7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11375,893,269 - 76,130,080 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1375,894,529 - 76,130,080 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01356,846,724 - 57,084,178 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
LMO7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12229,415,374 - 29,619,215 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2229,415,337 - 29,618,667 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2229,276,170 - 29,479,940 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02229,750,469 - 29,947,955 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2229,750,520 - 29,947,968 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12229,401,034 - 29,598,351 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02229,444,631 - 29,641,926 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02229,513,289 - 29,710,649 (+)NCBIUU_Cfam_GSD_1.0
Lmo7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945129,875,508 - 130,083,555 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365115,292,737 - 5,501,374 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LMO7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1148,072,159 - 48,133,446 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11147,911,076 - 48,133,449 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21152,681,961 - 52,709,628 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LMO7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1354,647,783 - 54,954,970 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl354,736,294 - 54,957,721 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604610,866,306 - 11,099,634 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lmo7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475124,637,354 - 24,855,450 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475124,636,636 - 24,855,515 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Position Markers
C78582  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3814101,934,502 - 101,934,646UniSTSGRCm38
MGSCv3714102,333,719 - 102,333,863UniSTSGRCm37
Celera14100,569,876 - 100,570,020UniSTS
Cytogenetic Map14E2.3UniSTS
Whitehead/MRC_RH141070.31UniSTS
41.MHAa43f5.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3814101,921,583 - 101,921,654UniSTSGRCm38
MGSCv3714102,320,800 - 102,320,871UniSTSGRCm37
Celera14100,556,957 - 100,557,028UniSTS
Cytogenetic Map14E2.3UniSTS
Whitehead_YAC14 UniSTS
RH126397  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3814101,934,367 - 101,934,600UniSTSGRCm38
MGSCv3714102,333,584 - 102,333,817UniSTSGRCm37
Celera14100,569,741 - 100,569,974UniSTS
Cytogenetic Map14E2.3UniSTS
Whitehead/MRC_RH141068.88UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
14747006Mancz12_mmandible centroid size 12 (mouse)1470071977104071977Mouse
10054475Ossc3_mosteosarcoma susceptibility 3 (mouse)Not determined1470863768104863926Mouse
1300551Lprm3_mlymphoproliferation modifier 3 (mouse)Not determined1471221224105221344Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
13524530Bodwtq11_mbody wweight QTL 11 (mouse)1487767629102538219Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3256
Count of miRNA genes:849
Interacting mature miRNAs:1179
Transcripts:ENSMUST00000100337, ENSMUST00000159026, ENSMUST00000159154, ENSMUST00000159258, ENSMUST00000159314, ENSMUST00000159597, ENSMUST00000159769, ENSMUST00000159797, ENSMUST00000159806, ENSMUST00000159812, ENSMUST00000159850, ENSMUST00000159948, ENSMUST00000160038, ENSMUST00000160876, ENSMUST00000161668, ENSMUST00000162091
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001347628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB614044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP762088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF071857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000100337   ⟹   ENSMUSP00000097910
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14101,967,393 - 102,172,146 (+)Ensembl
GRCm38.p6 Ensembl14101,729,957 - 101,934,710 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159026   ⟹   ENSMUSP00000124605
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,077,943 - 102,136,040 (+)Ensembl
GRCm38.p6 Ensembl14101,840,507 - 101,898,604 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159154
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,156,513 - 102,168,196 (+)Ensembl
GRCm38.p6 Ensembl14101,919,077 - 101,930,760 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159258   ⟹   ENSMUSP00000125465
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,075,948 - 102,172,125 (+)Ensembl
GRCm38.p6 Ensembl14101,838,512 - 101,934,689 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159314   ⟹   ENSMUSP00000124349
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,078,084 - 102,172,123 (+)Ensembl
GRCm38.p6 Ensembl14101,840,648 - 101,934,687 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159597   ⟹   ENSMUSP00000123706
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,114,260 - 102,171,962 (+)Ensembl
GRCm38.p6 Ensembl14101,876,824 - 101,934,526 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159769
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,066,404 - 102,118,267 (+)Ensembl
GRCm38.p6 Ensembl14101,828,968 - 101,880,831 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159797
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,121,555 - 102,125,636 (+)Ensembl
GRCm38.p6 Ensembl14101,884,119 - 101,888,200 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159806   ⟹   ENSMUSP00000124300
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,118,277 - 102,171,631 (+)Ensembl
GRCm38.p6 Ensembl14101,880,841 - 101,934,195 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159812
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,106,906 - 102,121,653 (+)Ensembl
GRCm38.p6 Ensembl14101,869,470 - 101,884,217 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159850   ⟹   ENSMUSP00000159141
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,163,739 - 102,170,573 (+)Ensembl
GRCm38.p6 Ensembl14101,926,303 - 101,933,137 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159948
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,078,255 - 102,150,113 (+)Ensembl
GRCm38.p6 Ensembl14101,840,819 - 101,912,677 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160038
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,166,697 - 102,170,302 (+)Ensembl
GRCm38.p6 Ensembl14101,929,261 - 101,932,866 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160876
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,121,523 - 102,137,551 (+)Ensembl
GRCm38.p6 Ensembl14101,884,087 - 101,900,115 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161668
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,077,733 - 102,121,850 (+)Ensembl
GRCm38.p6 Ensembl14101,840,297 - 101,884,414 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162091
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14102,077,943 - 102,123,269 (+)Ensembl
GRCm38.p6 Ensembl14101,840,507 - 101,885,833 (+)Ensembl
RefSeq Acc Id: NM_001347628   ⟹   NP_001334557
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,078,059 - 102,172,129 (+)NCBI
GRCm3814101,840,623 - 101,934,693 (+)NCBI
Sequence:
RefSeq Acc Id: NM_201529   ⟹   NP_963287
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,364 - 102,172,129 (+)NCBI
GRCm3814101,729,928 - 101,934,693 (+)NCBI
MGSCv3714102,129,145 - 102,333,910 (+)RGD
Celera14100,369,410 - 100,570,067 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006519176   ⟹   XP_006519239
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519178   ⟹   XP_006519241
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519179   ⟹   XP_006519242
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519181   ⟹   XP_006519244
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519182   ⟹   XP_006519245
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519188   ⟹   XP_006519251
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,353 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519190   ⟹   XP_006519253
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519191   ⟹   XP_006519254
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,075,949 - 102,172,144 (+)NCBI
GRCm3814101,838,513 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519192   ⟹   XP_006519255
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,353 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247870   ⟹   XP_030103730
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
GRCm3814101,730,011 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247873   ⟹   XP_030103733
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,582 - 102,172,144 (+)NCBI
GRCm3814101,840,277 - 101,934,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158702   ⟹   XP_036014595
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158703   ⟹   XP_036014596
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158704   ⟹   XP_036014597
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158705   ⟹   XP_036014598
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158706   ⟹   XP_036014599
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158707   ⟹   XP_036014600
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158708   ⟹   XP_036014601
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158709   ⟹   XP_036014602
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158710   ⟹   XP_036014603
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158711   ⟹   XP_036014604
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,583 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158712   ⟹   XP_036014605
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158713   ⟹   XP_036014606
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158714   ⟹   XP_036014607
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158715   ⟹   XP_036014608
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,585 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158716   ⟹   XP_036014609
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,579 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158717   ⟹   XP_036014610
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158718   ⟹   XP_036014611
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,585 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158719   ⟹   XP_036014612
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,468 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158720   ⟹   XP_036014613
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,586 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158721   ⟹   XP_036014614
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,583 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158722   ⟹   XP_036014615
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158723   ⟹   XP_036014616
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158724   ⟹   XP_036014617
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,078,042 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158725   ⟹   XP_036014618
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158726   ⟹   XP_036014619
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158727   ⟹   XP_036014620
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158728   ⟹   XP_036014621
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,078,043 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158729   ⟹   XP_036014622
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158730   ⟹   XP_036014623
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,078,043 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158731   ⟹   XP_036014624
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,769 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158732   ⟹   XP_036014625
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158733   ⟹   XP_036014626
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158734   ⟹   XP_036014627
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,106,787 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158735   ⟹   XP_036014628
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158736   ⟹   XP_036014629
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,077,777 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158737   ⟹   XP_036014630
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,353 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158738   ⟹   XP_036014631
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,967,353 - 102,172,144 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158739   ⟹   XP_036014632
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914102,060,520 - 102,172,144 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001334557 (Get FASTA)   NCBI Sequence Viewer  
  NP_963287 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519239 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519241 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519242 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519244 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519245 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519251 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519253 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519254 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519255 (Get FASTA)   NCBI Sequence Viewer  
  XP_030103730 (Get FASTA)   NCBI Sequence Viewer  
  XP_030103733 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014595 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014596 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014597 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014598 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014599 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014600 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014601 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014602 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014603 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014604 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014605 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014606 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014607 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014608 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014609 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014610 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014611 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014612 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014613 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014614 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014615 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014616 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014617 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014618 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014619 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014620 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014621 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014622 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014623 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014624 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014625 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014626 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014627 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014628 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014629 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014630 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014631 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014632 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI45012 (Get FASTA)   NCBI Sequence Viewer  
  ABK60217 (Get FASTA)   NCBI Sequence Viewer  
  BAC98041 (Get FASTA)   NCBI Sequence Viewer  
  BAE25281 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_963287   ⟸   NM_201529
- Peptide Label: isoform 1
- UniProtKB: A0T1J8 (UniProtKB/TrEMBL),   E9PYF4 (UniProtKB/TrEMBL),   Q6ZQ32 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006519239   ⟸   XM_006519176
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006519241   ⟸   XM_006519178
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006519242   ⟸   XM_006519179
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006519244   ⟸   XM_006519181
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006519245   ⟸   XM_006519182
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_006519251   ⟸   XM_006519188
- Peptide Label: isoform X40
- Sequence:
RefSeq Acc Id: XP_006519255   ⟸   XM_006519192
- Peptide Label: isoform X47
- Sequence:
RefSeq Acc Id: XP_006519253   ⟸   XM_006519190
- Peptide Label: isoform X43
- Sequence:
RefSeq Acc Id: XP_006519254   ⟸   XM_006519191
- Peptide Label: isoform X45
- Sequence:
RefSeq Acc Id: XP_030103730   ⟸   XM_030247870
- Peptide Label: isoform X23
RefSeq Acc Id: XP_030103733   ⟸   XM_030247873
- Peptide Label: isoform X46
RefSeq Acc Id: NP_001334557   ⟸   NM_001347628
- Peptide Label: isoform 2
- UniProtKB: E9PYI7 (UniProtKB/TrEMBL),   Q6ZQ32 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000124605   ⟸   ENSMUST00000159026
RefSeq Acc Id: ENSMUSP00000124349   ⟸   ENSMUST00000159314
RefSeq Acc Id: ENSMUSP00000125465   ⟸   ENSMUST00000159258
RefSeq Acc Id: ENSMUSP00000124300   ⟸   ENSMUST00000159806
RefSeq Acc Id: ENSMUSP00000159141   ⟸   ENSMUST00000159850
RefSeq Acc Id: ENSMUSP00000123706   ⟸   ENSMUST00000159597
RefSeq Acc Id: ENSMUSP00000097910   ⟸   ENSMUST00000100337
RefSeq Acc Id: XP_036014630   ⟸   XM_036158737
- Peptide Label: isoform X41
RefSeq Acc Id: XP_036014631   ⟸   XM_036158738
- Peptide Label: isoform X42
RefSeq Acc Id: XP_036014595   ⟸   XM_036158702
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036014597   ⟸   XM_036158704
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036014598   ⟸   XM_036158705
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036014600   ⟸   XM_036158707
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036014599   ⟸   XM_036158706
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036014601   ⟸   XM_036158708
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036014602   ⟸   XM_036158709
- Peptide Label: isoform X11
RefSeq Acc Id: XP_036014603   ⟸   XM_036158710
- Peptide Label: isoform X12
RefSeq Acc Id: XP_036014606   ⟸   XM_036158713
- Peptide Label: isoform X16
RefSeq Acc Id: XP_036014596   ⟸   XM_036158703
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036014605   ⟸   XM_036158712
- Peptide Label: isoform X15
RefSeq Acc Id: XP_036014607   ⟸   XM_036158714
- Peptide Label: isoform X17
RefSeq Acc Id: XP_036014610   ⟸   XM_036158717
- Peptide Label: isoform X21
RefSeq Acc Id: XP_036014612   ⟸   XM_036158719
- Peptide Label: isoform X24
RefSeq Acc Id: XP_036014632   ⟸   XM_036158739
- Peptide Label: isoform X44
RefSeq Acc Id: XP_036014609   ⟸   XM_036158716
- Peptide Label: isoform X20
RefSeq Acc Id: XP_036014604   ⟸   XM_036158711
- Peptide Label: isoform X14
RefSeq Acc Id: XP_036014614   ⟸   XM_036158721
- Peptide Label: isoform X26
RefSeq Acc Id: XP_036014608   ⟸   XM_036158715
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036014611   ⟸   XM_036158718
- Peptide Label: isoform X22
RefSeq Acc Id: XP_036014613   ⟸   XM_036158720
- Peptide Label: isoform X25
RefSeq Acc Id: XP_036014624   ⟸   XM_036158731
- Peptide Label: isoform X35
RefSeq Acc Id: XP_036014615   ⟸   XM_036158722
- Peptide Label: isoform X27
RefSeq Acc Id: XP_036014616   ⟸   XM_036158723
- Peptide Label: isoform X28
RefSeq Acc Id: XP_036014619   ⟸   XM_036158726
- Peptide Label: isoform X30
RefSeq Acc Id: XP_036014622   ⟸   XM_036158729
- Peptide Label: isoform X33
RefSeq Acc Id: XP_036014618   ⟸   XM_036158725
- Peptide Label: isoform X29
RefSeq Acc Id: XP_036014620   ⟸   XM_036158727
- Peptide Label: isoform X31
RefSeq Acc Id: XP_036014625   ⟸   XM_036158732
- Peptide Label: isoform X36
RefSeq Acc Id: XP_036014626   ⟸   XM_036158733
- Peptide Label: isoform X37
RefSeq Acc Id: XP_036014628   ⟸   XM_036158735
- Peptide Label: isoform X38
RefSeq Acc Id: XP_036014629   ⟸   XM_036158736
- Peptide Label: isoform X39
RefSeq Acc Id: XP_036014617   ⟸   XM_036158724
- Peptide Label: isoform X29
RefSeq Acc Id: XP_036014621   ⟸   XM_036158728
- Peptide Label: isoform X32
RefSeq Acc Id: XP_036014623   ⟸   XM_036158730
- Peptide Label: isoform X34
RefSeq Acc Id: XP_036014627   ⟸   XM_036158734
- Peptide Label: isoform X37
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9PYF4-F1-model_v2 AlphaFold E9PYF4 1-1699 view protein structure

Promoters
RGD ID:8683124
Promoter ID:EPDNEW_M19593
Type:multiple initiation site
Name:Lmo7_2
Description:Mus musculus LIM domain only 7 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19594  EPDNEW_M19595  EPDNEW_M19596  EPDNEW_M19597  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814101,729,940 - 101,730,000EPDNEW
RGD ID:8683126
Promoter ID:EPDNEW_M19594
Type:multiple initiation site
Name:Lmo7_4
Description:Mus musculus LIM domain only 7 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19593  EPDNEW_M19595  EPDNEW_M19596  EPDNEW_M19597  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814101,838,508 - 101,838,568EPDNEW
RGD ID:8683128
Promoter ID:EPDNEW_M19595
Type:initiation region
Name:Lmo7_3
Description:Mus musculus LIM domain only 7 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19593  EPDNEW_M19594  EPDNEW_M19596  EPDNEW_M19597  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814101,840,612 - 101,840,672EPDNEW
RGD ID:8683130
Promoter ID:EPDNEW_M19596
Type:initiation region
Name:Lmo7_5
Description:Mus musculus LIM domain only 7 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19593  EPDNEW_M19594  EPDNEW_M19595  EPDNEW_M19597  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814101,884,061 - 101,884,121EPDNEW
RGD ID:8683132
Promoter ID:EPDNEW_M19597
Type:single initiation site
Name:Lmo7_1
Description:Mus musculus LIM domain only 7 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19593  EPDNEW_M19594  EPDNEW_M19595  EPDNEW_M19596  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814101,888,427 - 101,888,487EPDNEW
RGD ID:6824808
Promoter ID:MM_KWN:17654
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:AK085301_GM9922,   ENSMUST00000066461,   NM_201529
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3614102,127,086 - 102,129,237 (-)MPROMDB
RGD ID:6825130
Promoter ID:MM_KWN:17656
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung
Transcripts:UC007UVZ.1,   UC007UWA.1,   UC007UWB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3614102,239,504 - 102,240,004 (+)MPROMDB
RGD ID:6825133
Promoter ID:MM_KWN:17657
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:UC007UWC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3614102,280,011 - 102,280,511 (+)MPROMDB
RGD ID:6825134
Promoter ID:MM_KWN:17658
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:UC007UWD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3614102,282,511 - 102,283,682 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1353586 AgrOrtholog
Ensembl Genes ENSMUSG00000033060 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000097910 ENTREZGENE
  ENSMUSP00000097910.4 UniProtKB/TrEMBL
  ENSMUSP00000123706 ENTREZGENE
  ENSMUSP00000123706.2 UniProtKB/TrEMBL
  ENSMUSP00000124300 ENTREZGENE
  ENSMUSP00000124300.2 UniProtKB/TrEMBL
  ENSMUSP00000124349 ENTREZGENE
  ENSMUSP00000124349.2 UniProtKB/TrEMBL
  ENSMUSP00000124605.2 UniProtKB/TrEMBL
  ENSMUSP00000125465.2 UniProtKB/TrEMBL
  ENSMUSP00000159141.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000100337 ENTREZGENE
  ENSMUST00000100337.10 UniProtKB/TrEMBL
  ENSMUST00000159026.8 UniProtKB/TrEMBL
  ENSMUST00000159258.8 UniProtKB/TrEMBL
  ENSMUST00000159314 ENTREZGENE
  ENSMUST00000159314.8 UniProtKB/TrEMBL
  ENSMUST00000159597 ENTREZGENE
  ENSMUST00000159597.8 UniProtKB/TrEMBL
  ENSMUST00000159806 ENTREZGENE
  ENSMUST00000159806.2 UniProtKB/TrEMBL
  ENSMUST00000159850.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  2.30.42.10 UniProtKB/TrEMBL
InterPro Calponin-like_dom_sf UniProtKB/TrEMBL
  CH-domain UniProtKB/TrEMBL
  DUF4757 UniProtKB/TrEMBL
  LMO-7 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  SM22_calponin UniProtKB/TrEMBL
  Znf_LIM UniProtKB/TrEMBL
KEGG Report mmu:380928 UniProtKB/TrEMBL
MGD MGI:1353586 ENTREZGENE
NCBI Gene 380928 ENTREZGENE
PANTHER PTHR46767 UniProtKB/TrEMBL
Pfam DUF4757 UniProtKB/TrEMBL
  LIM UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PF00307 UniProtKB/TrEMBL
PhenoGen Lmo7 PhenoGen
PRINTS SM22CALPONIN UniProtKB/TrEMBL
PROSITE LIM_DOMAIN_1 UniProtKB/TrEMBL
  LIM_DOMAIN_2 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PS50021 UniProtKB/TrEMBL
SMART LIM UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
Superfamily-SCOP Calponin-homology UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
UniProt A0A5F8MPW2_MOUSE UniProtKB/TrEMBL
  A0T1J8 ENTREZGENE, UniProtKB/TrEMBL
  B7ZN52_MOUSE UniProtKB/TrEMBL
  E0CZD8_MOUSE UniProtKB/TrEMBL
  E9PYF4 ENTREZGENE, UniProtKB/TrEMBL
  E9PYI7 ENTREZGENE, UniProtKB/TrEMBL
  F6TFN2_MOUSE UniProtKB/TrEMBL
  F6VG99_MOUSE UniProtKB/TrEMBL
  Q3UPW3_MOUSE UniProtKB/TrEMBL
  Q6ZQ32 ENTREZGENE, UniProtKB/TrEMBL