Eml5 (echinoderm microtubule associated protein like 5) - Rat Genome Database

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Gene: Eml5 (echinoderm microtubule associated protein like 5) Mus musculus
Analyze
Symbol: Eml5
Name: echinoderm microtubule associated protein like 5
RGD ID: 1551606
MGI Page MGI
Description: Predicted to enable microtubule binding activity. Predicted to be located in cytoplasm and microtubule. Orthologous to human EML5 (EMAP like 5).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: BC027154; C130068M19Rik; echinoderm microtubule-associated protein-like 5; EMAP-5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391298,752,863 - 98,867,770 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1298,753,064 - 98,867,743 (-)EnsemblGRCm39 Ensembl
GRCm381298,786,604 - 98,901,511 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1298,786,805 - 98,901,484 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712100,024,814 - 100,139,694 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361299,187,654 - 99,302,534 (-)NCBIMGSCv36mm8
Celera12100,012,303 - 100,127,197 (-)NCBICelera
Cytogenetic Map12ENCBI
cM Map1249.88NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10725249   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12477932   PMID:12520002   PMID:16141072   PMID:16141073   PMID:16602821   PMID:19554387  
PMID:21873635  


Genomics

Comparative Map Data
Eml5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391298,752,863 - 98,867,770 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1298,753,064 - 98,867,743 (-)EnsemblGRCm39 Ensembl
GRCm381298,786,604 - 98,901,511 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1298,786,805 - 98,901,484 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712100,024,814 - 100,139,694 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361299,187,654 - 99,302,534 (-)NCBIMGSCv36mm8
Celera12100,012,303 - 100,127,197 (-)NCBICelera
Cytogenetic Map12ENCBI
cM Map1249.88NCBI
EML5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381488,612,431 - 88,792,953 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1488,612,431 - 88,792,953 (-)EnsemblGRCh38hg38GRCh38
GRCh371489,078,775 - 89,259,297 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361488,150,954 - 88,328,910 (-)NCBINCBI36Build 36hg18NCBI36
Build 341488,150,956 - 88,328,910NCBI
Celera1469,126,811 - 69,307,471 (-)NCBICelera
Cytogenetic Map14q31.3NCBI
HuRef1469,251,426 - 69,434,464 (-)NCBIHuRef
CHM1_11489,019,033 - 89,196,906 (-)NCBICHM1_1
T2T-CHM13v2.01482,833,321 - 83,016,566 (-)NCBIT2T-CHM13v2.0
Eml5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86123,775,269 - 123,905,585 (-)NCBIGRCr8
mRatBN7.26118,046,655 - 118,175,831 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6118,046,655 - 118,175,831 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6118,197,287 - 118,325,751 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06118,494,088 - 118,622,546 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06117,828,943 - 117,957,398 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06122,768,939 - 122,898,046 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6122,770,055 - 122,897,997 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06131,989,998 - 132,118,760 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46122,958,412 - 123,087,547 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16122,973,904 - 123,091,229 (-)NCBI
Celera6115,606,223 - 115,734,030 (-)NCBICelera
Cytogenetic Map6q32NCBI
Eml5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543811,226,458 - 11,353,129 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543811,225,910 - 11,366,996 (-)NCBIChiLan1.0ChiLan1.0
EML5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21589,762,137 - 89,942,940 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11488,978,644 - 89,159,447 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01469,233,075 - 69,416,483 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11488,590,141 - 88,772,323 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1488,590,141 - 88,774,705 (-)Ensemblpanpan1.1panPan2
EML5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1859,850,400 - 60,033,245 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl859,853,379 - 60,033,906 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha859,428,164 - 59,610,985 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0860,119,892 - 60,302,646 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl860,119,984 - 60,303,239 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1859,798,834 - 59,981,830 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0859,844,113 - 60,032,955 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0860,178,155 - 60,361,241 (-)NCBIUU_Cfam_GSD_1.0
Eml5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864015,828,780 - 16,010,646 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648816,062,766 - 16,240,188 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648816,061,132 - 16,240,182 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EML5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7110,512,079 - 110,705,441 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17110,511,937 - 110,705,452 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27117,009,391 - 117,173,408 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EML5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12466,249,880 - 66,451,844 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2466,253,225 - 66,451,463 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605353,608,870 - 53,799,753 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eml5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473413,530,532 - 13,732,868 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473413,530,116 - 13,733,022 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eml5
3294 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1174
Count of miRNA genes:579
Interacting mature miRNAs:727
Transcripts:ENSMUST00000065716
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
27226797Scvln19_msacral vertebrae length 2, 16 week (mouse)126214678699466259Mouse
14746976Manh73_mmandible shape 73 (mouse)126585713199857131Mouse
27226771Tibl14_mtibia length 14, 10 week (mouse)126834677498766259Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse
4141738Tgq23_mtriglyceride QTL 23 (mouse)Not determined72112877106112877Mouse
1301926Adip6_madiposity 6 (mouse)Not determined1273887422107887526Mouse
1301689Skull18_mskull morphology 18 (mouse)Not determined1273887422107887526Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277512220111512220Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80956708113383533Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80956708113383533Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80956708113383533Mouse
39128213Lwq23_mliver weight QTL 10 (mouse)1280956708113383533Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1280989143114989143Mouse
25823169Hrsq8_mhost response to SARS QTL 8, log titer (mouse)1281696245108495368Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282666396116666396Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283532075117532224Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283532075117532224Mouse
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285961579119961683Mouse
10412156Nociq3_mnociceptive sensitivity inflammatory QTL 3 (mouse)Not determined1286396075114831653Mouse
4142007Chlq17_mcirculating hormone level QTL 17 (mouse)Not determined1288052874120092757Mouse
1300545Lifespan3_mlife span 3 (mouse)Not determined1288052874120092757Mouse
1301308Prdt4_mprion disease incubation time 4 (mouse)Not determined1288308354120092757Mouse
5491194Mobq3_mmultigenic obesity QTL 3 (mouse)Not determined1289664071120092757Mouse
1301836Heal5_mwound healing/regeneration 5 (mouse)Not determined1289939031120092757Mouse
1301922Bbaa6_mB.burgdorferi-associated arthritis 6 (mouse)Not determined1290308268120092757Mouse
4142402Ccs1_mcolon cancer susceptibility 1 (mouse)Not determined90887422100023109Mouse
12910790Pwgrq7_mpre-weaning growth rate QTL 7 (mouse)1290937367108645308Mouse
10402491Dipa4_mdrug induced psychomotor activation 4 (mouse)Not determined1291222515120092757Mouse
10412192Bbaa27_mB.burgdorferi-associated arthritis 27 (mouse)Not determined1291254220107308393Mouse
12910532Nrq10a_mnoise-induced hearing loss resistant QTL 10a (mouse)1292750025120092757Mouse
12910533Nrq10_mnoise-induced hearing loss resistant QTL 10 (mouse)1292750025120092757Mouse
1357463Vtbt14_mvertebral trabecular bone trait 14 (mouse)Not determined1292936097120092757Mouse
1300973Abmm_mantibody mediated myocarditis (mouse)Not determined1293264461120092757Mouse
11039526Ccc1_mcolitis susceptibility in the Collaborative Cross 1 (mouse)1293528334111028223Mouse
1302177Dps2_mdelta power in slow-wave sleep 2 (mouse)Not determined1294146064120092757Mouse
1302138Im6_mimmunoregulatory 6 (mouse)Not determined1296860337120092757Mouse
1301269Sluc12_msusceptibility to lung cancer 12 (mouse)Not determined1296860337120092757Mouse

Markers in Region
AU014748  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381232,713,483 - 32,713,644UniSTSGRCm38
GRCm381298,787,527 - 98,787,686UniSTSGRCm38
MGSCv371233,398,348 - 33,398,509UniSTSGRCm37
MGSCv3712100,025,737 - 100,025,896UniSTSGRCm37
Celera1234,159,811 - 34,159,972UniSTS
Celera12100,013,226 - 100,013,385UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map12EUniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003950056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003950058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003950059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC159193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC158137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000065716   ⟹   ENSMUSP00000065643
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,753,064 - 98,867,431 (-)Ensembl
GRCm38.p6 Ensembl1298,786,805 - 98,901,172 (-)Ensembl
RefSeq Acc Id: ENSMUST00000220676
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,766,700 - 98,768,683 (-)Ensembl
GRCm38.p6 Ensembl1298,800,441 - 98,802,424 (-)Ensembl
RefSeq Acc Id: ENSMUST00000220848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,756,584 - 98,758,960 (-)Ensembl
GRCm38.p6 Ensembl1298,790,325 - 98,792,701 (-)Ensembl
RefSeq Acc Id: ENSMUST00000221107
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,758,812 - 98,765,239 (-)Ensembl
GRCm38.p6 Ensembl1298,792,553 - 98,798,980 (-)Ensembl
RefSeq Acc Id: ENSMUST00000221511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,765,268 - 98,766,292 (-)Ensembl
GRCm38.p6 Ensembl1298,799,009 - 98,800,033 (-)Ensembl
RefSeq Acc Id: ENSMUST00000222097   ⟹   ENSMUSP00000152624
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,758,902 - 98,768,595 (-)Ensembl
GRCm38.p6 Ensembl1298,792,643 - 98,802,336 (-)Ensembl
RefSeq Acc Id: ENSMUST00000222128   ⟹   ENSMUSP00000152401
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,782,228 - 98,793,624 (-)Ensembl
GRCm38.p6 Ensembl1298,815,969 - 98,827,365 (-)Ensembl
RefSeq Acc Id: ENSMUST00000222593
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,764,556 - 98,766,245 (-)Ensembl
GRCm38.p6 Ensembl1298,798,297 - 98,799,986 (-)Ensembl
RefSeq Acc Id: ENSMUST00000222717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,755,408 - 98,760,892 (-)Ensembl
GRCm38.p6 Ensembl1298,789,149 - 98,794,633 (-)Ensembl
RefSeq Acc Id: ENSMUST00000223282   ⟹   ENSMUSP00000152709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1298,755,404 - 98,867,743 (-)Ensembl
GRCm38.p6 Ensembl1298,789,145 - 98,901,484 (-)Ensembl
RefSeq Acc Id: NM_001081191   ⟹   NP_001074660
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,752,863 - 98,867,743 (-)NCBI
GRCm381298,786,604 - 98,901,484 (-)NCBI
MGSCv3712100,024,814 - 100,139,694 (-)RGD
Celera12100,012,303 - 100,127,197 (-)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006515970   ⟹   XP_006516033
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
GRCm381298,789,147 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006515972   ⟹   XP_006516035
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
GRCm381298,789,147 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006515976   ⟹   XP_006516039
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,818,952 (-)NCBI
GRCm381298,789,147 - 98,852,693 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017315105   ⟹   XP_017170594
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
GRCm381298,789,147 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017315107   ⟹   XP_017170596
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,765,130 - 98,867,770 (-)NCBI
GRCm381298,798,871 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246770   ⟹   XP_030102630
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,750 (-)NCBI
GRCm381298,789,147 - 98,901,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246771   ⟹   XP_030102631
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,784,078 - 98,867,770 (-)NCBI
GRCm381298,817,819 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157493   ⟹   XP_036013386
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001780453
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
GRCm381298,789,147 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001780455
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
GRCm381298,789,149 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001780456
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
GRCm381298,789,147 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001780457
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
GRCm381298,789,149 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003950056
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
GRCm381298,789,147 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003950058
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
GRCm381298,789,149 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003950059
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
GRCm381298,815,997 - 98,901,511 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937508
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937509
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937510
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937511
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937512
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937513
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937514
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937515
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,408 - 98,867,770 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937516
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391298,755,406 - 98,867,770 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001074660   ⟸   NM_001081191
- UniProtKB: Q8BRL0 (UniProtKB/Swiss-Prot),   Q8R2W0 (UniProtKB/Swiss-Prot),   Q8BQM8 (UniProtKB/Swiss-Prot),   B2RY88 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516035   ⟸   XM_006515972
- Peptide Label: isoform X3
- UniProtKB: B2RY88 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516033   ⟸   XM_006515970
- Peptide Label: isoform X1
- UniProtKB: B2RY88 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516039   ⟸   XM_006515976
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_017170594   ⟸   XM_017315105
- Peptide Label: isoform X2
- UniProtKB: B2RY88 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170596   ⟸   XM_017315107
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_030102630   ⟸   XM_030246770
- Peptide Label: isoform X5
- UniProtKB: B2RY88 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102631   ⟸   XM_030246771
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000152709   ⟸   ENSMUST00000223282
RefSeq Acc Id: ENSMUSP00000065643   ⟸   ENSMUST00000065716
RefSeq Acc Id: ENSMUSP00000152624   ⟸   ENSMUST00000222097
RefSeq Acc Id: ENSMUSP00000152401   ⟸   ENSMUST00000222128
RefSeq Acc Id: XP_036013386   ⟸   XM_036157493
- Peptide Label: isoform X4
- UniProtKB: B2RY88 (UniProtKB/TrEMBL)
Protein Domains
Anaphase-promoting complex subunit 4-like WD40   HELP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BQM8-F1-model_v2 AlphaFold Q8BQM8 1-1977 view protein structure

Promoters
RGD ID:8678976
Promoter ID:EPDNEW_M17519
Type:initiation region
Name:Eml5_1
Description:Mus musculus echinoderm microtubule associated protein like 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381298,901,446 - 98,901,506EPDNEW
RGD ID:6822880
Promoter ID:MM_KWN:12444
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney
Transcripts:UC007ORM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612100,032,789 - 100,033,289 (-)MPROMDB
RGD ID:6822879
Promoter ID:MM_KWN:12446
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:NM_001081191
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612100,139,396 - 100,139,972 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442513 AgrOrtholog
Ensembl Genes ENSMUSG00000051166 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000065716.8 UniProtKB/TrEMBL
  ENSMUST00000222097.2 UniProtKB/TrEMBL
  ENSMUST00000222128.2 UniProtKB/TrEMBL
  ENSMUST00000223282 ENTREZGENE
  ENSMUST00000223282.2 UniProtKB/Swiss-Prot
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Apc4_WD40_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:319670 UniProtKB/Swiss-Prot
MGD MGI:2442513 ENTREZGENE
NCBI Gene 319670 ENTREZGENE
PANTHER ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELP DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  WD-40 REPEAT PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ANAPC4_WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eml5 PhenoGen
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50998 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TolB, C-terminal domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1Y7VJC7_MOUSE UniProtKB/TrEMBL
  A0A1Y7VJS8_MOUSE UniProtKB/TrEMBL
  A0A217FL67_MOUSE UniProtKB/TrEMBL
  B2RY88 ENTREZGENE, UniProtKB/TrEMBL
  EMAL5_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BRL0 ENTREZGENE
  Q8C4G0_MOUSE UniProtKB/TrEMBL
  Q8R2W0 ENTREZGENE
UniProt Secondary Q8BRL0 UniProtKB/Swiss-Prot
  Q8R2W0 UniProtKB/Swiss-Prot