Pdia4 (protein disulfide isomerase associated 4) - Rat Genome Database

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Gene: Pdia4 (protein disulfide isomerase associated 4) Mus musculus
Analyze
Symbol: Pdia4
Name: protein disulfide isomerase associated 4
RGD ID: 1551534
MGI Page MGI
Description: Predicted to enable protein disulfide isomerase activity and protein-disulfide reductase activity. Predicted to be involved in chaperone-mediated protein folding; positive regulation of protein folding; and response to endoplasmic reticulum stress. Located in cell surface and endoplasmic reticulum. Part of endoplasmic reticulum chaperone complex. Is expressed in embryo; medulla oblongata basal plate; olfactory cortex ventricular layer; and telencephalon ventricular layer. Orthologous to human PDIA4 (protein disulfide isomerase family A member 4).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI987846; C; Cai; calcium binding protein, intestinal; cDNA sequence U48620; endoplasmic reticulum protein 72; endoplasmic reticulum resident protein 72; ER protein 72; ERp; ERp-72; Erp72; protein disulfide-isomerase A4; U48620
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39647,773,075 - 47,790,446 (-)NCBIGRCm39mm39
GRCm39 Ensembl647,773,075 - 47,790,364 (-)Ensembl
GRCm38647,796,141 - 47,813,512 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl647,796,141 - 47,813,430 (-)EnsemblGRCm38mm10GRCm38
MGSCv37647,746,140 - 47,763,511 (-)NCBIGRCm37mm9NCBIm37
MGSCv36647,725,727 - 47,743,098 (-)NCBImm8
Celera648,328,916 - 48,346,203 (-)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map622.94NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP,ISO)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP)
2-hydroxypropanoic acid  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-amino-2,6-dinitrotoluene  (ISO)
4-tert-Octylphenol  (ISO)
5-fluorouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucosamine  (EXP)
aldehydo-D-glucose  (EXP)
ammonium chloride  (ISO)
antimony(0)  (ISO)
aristolochic acid  (ISO)
Aroclor 1254  (EXP)
avobenzone  (ISO)
beauvericin  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-D-glucosamine  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
carboplatin  (ISO)
cefaloridine  (ISO)
ceruletide  (ISO)
chromium atom  (ISO)
cisplatin  (ISO)
clobetasol  (EXP)
clofibrate  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
coumarin  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (EXP)
dexamethasone  (ISO)
diamminedichloroplatinum  (ISO)
dichlorine  (ISO)
dichloroacetic acid  (EXP)
diethylstilbestrol  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
flutamide  (ISO)
folic acid  (EXP)
gentamycin  (ISO)
glafenine  (ISO)
glucose  (EXP)
indometacin  (ISO)
isobutanol  (ISO)
isoprenaline  (EXP)
ivermectin  (ISO)
ketamine  (ISO)
lovastatin  (EXP)
mercury atom  (ISO)
mercury(0)  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methylparaben  (ISO)
microcystin-LR  (EXP)
monosodium L-glutamate  (EXP)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nimesulide  (ISO)
ozone  (ISO)
p-tert-Amylphenol  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (ISO)
PhIP  (ISO)
potassium dichromate  (ISO)
procymidone  (ISO)
progesterone  (EXP)
propiconazole  (EXP)
prostaglandin F2alpha  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP)
rotenone  (ISO)
SCH 23390  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
T-2 toxin  (ISO)
tacrolimus hydrate  (EXP)
tamoxifen  (EXP)
tanespimycin  (ISO)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
titanium dioxide  (EXP)
transplatin  (ISO)
troglitazone  (ISO)
tungsten  (EXP)
tunicamycin  (EXP,ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
warfarin  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:2295602   PMID:3320970   PMID:8216852   PMID:8408057   PMID:9457688   PMID:9493907   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11470505  
PMID:11544199   PMID:12466851   PMID:12475965   PMID:12477932   PMID:12520002   PMID:12535952   PMID:12904583   PMID:16141072   PMID:16141073   PMID:16314518   PMID:16333982   PMID:18973680  
PMID:19995400   PMID:21159867   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22925884   PMID:24239381   PMID:25332179   PMID:26370502   PMID:27626380   PMID:28487027   PMID:28534513  
PMID:28576878   PMID:29180572   PMID:30333137   PMID:30550785   PMID:32325033   PMID:34487921   PMID:34542937  


Genomics

Comparative Map Data
Pdia4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39647,773,075 - 47,790,446 (-)NCBIGRCm39mm39
GRCm39 Ensembl647,773,075 - 47,790,364 (-)Ensembl
GRCm38647,796,141 - 47,813,512 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl647,796,141 - 47,813,430 (-)EnsemblGRCm38mm10GRCm38
MGSCv37647,746,140 - 47,763,511 (-)NCBIGRCm37mm9NCBIm37
MGSCv36647,725,727 - 47,743,098 (-)NCBImm8
Celera648,328,916 - 48,346,203 (-)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map622.94NCBI
PDIA4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl7149,003,062 - 149,028,662 (-)EnsemblGRCh38hg38GRCh38
GRCh387149,003,051 - 149,028,505 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh377148,700,143 - 148,725,597 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367148,331,087 - 148,356,715 (-)NCBINCBI36hg18NCBI36
Celera7143,370,993 - 143,396,607 (-)NCBI
Cytogenetic Map7q36.1NCBI
HuRef7142,778,950 - 142,804,531 (-)NCBIHuRef
CHM1_17148,708,552 - 148,734,184 (-)NCBICHM1_1
CRA_TCAGchr7v27148,038,519 - 148,064,131 (-)NCBI
Pdia4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2476,803,198 - 76,822,245 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl476,803,198 - 76,822,107 (-)Ensembl
Rnor_6.0477,470,636 - 77,489,535 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl477,470,636 - 77,489,535 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04142,140,946 - 142,159,845 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4475,929,398 - 75,948,299 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1476,205,527 - 76,224,429 (-)NCBI
Celera471,752,429 - 71,771,331 (-)NCBICelera
Cytogenetic Map4q24NCBI
Pdia4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554914,344,874 - 4,360,205 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554914,344,874 - 4,360,205 (-)NCBIChiLan1.0ChiLan1.0
PDIA4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.17153,210,542 - 153,236,721 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7153,210,553 - 153,236,721 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v07140,731,333 - 140,757,599 (-)NCBIMhudiblu_PPA_v0panPan3
PDIA4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1161,797,537 - 1,818,877 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl161,797,552 - 1,818,251 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha162,896,760 - 2,918,061 (+)NCBI
ROS_Cfam_1.0161,601,971 - 1,623,305 (+)NCBI
UMICH_Zoey_3.1161,588,802 - 1,610,117 (+)NCBI
UNSW_CanFamBas_1.0161,448,287 - 1,469,581 (+)NCBI
UU_Cfam_GSD_1.0161,452,161 - 1,473,485 (+)NCBI
Pdia4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051187,692,798 - 7,714,242 (+)NCBI
SpeTri2.0NW_0049365275,189,189 - 5,210,621 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PDIA4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9109,252,010 - 109,280,249 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19109,260,850 - 109,280,256 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29120,198,256 - 120,217,661 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PDIA4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121117,574,932 - 117,601,896 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl21117,574,427 - 117,601,960 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607213,525,893 - 13,553,262 (-)NCBIVero_WHO_p1.0
Pdia4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248006,723,567 - 6,742,024 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
AI987846  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38647,796,357 - 47,796,456UniSTSGRCm38
MGSCv37647,746,356 - 47,746,455UniSTSGRCm37
Celera648,329,129 - 48,329,229UniSTS
Cytogenetic Map6B2.3UniSTS
Whitehead/MRC_RH6446.73UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348726677Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348726677Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348726677Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61770000053500000Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61773466351734784Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1773466351734784Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61773466351734784Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61963941153639411Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61963941153639411Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61963941153639411Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268671322775Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62007289554072895Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62380000057800000Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2831405962314181Mouse
4141454Obrq4_mobesity resistance QTL 4 (mouse)Not determined3172656565726677Mouse
12880425V25Dq5_mvitamin D inactive form serum level QTL 5 (mouse)63270000066700000Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3285065078238974Mouse
1300959Lxw2_mlupus BXSB x NZW 2 (mouse)Not determined63389528167895420Mouse
11252142Mom12_mModifier of Min 12 (mouse)63389528167895420Mouse
1300767Aliq4_macute lung injury QTL 4 (mouse)Not determined63629634770296450Mouse
1357539Bsbob3_mBSB obesity 3 (mouse)Not determined63647147170471591Mouse
4141094Hrtr1_mheart rate 1 (mouse)Not determined3676447870764478Mouse
14746995Manh60_mmandible shape 60 (mouse)63722567771225677Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
1301326Trbv4c2_mT cell receptor beta variable 4 (mouse)Not determined64089129671379171Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64160000075600000Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64211637376116515Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64211637376116515Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64211637376116515Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64211637376116515Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64382681377811523Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64382681377811523Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64382681377811523Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64382681377811523Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64382681377811523Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64382681377811523Mouse
10043885Cia6c_mcollagen induced arthritis QTL 6c (mouse)Not determined64446587171119467Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:91
Count of miRNA genes:76
Interacting mature miRNAs:86
Transcripts:ENSMUST00000077290
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001368756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC166252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF165880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J05186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L14944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U48620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y00884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000077290   ⟹   ENSMUSP00000076521
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl647,773,075 - 47,790,364 (-)Ensembl
GRCm38.p6 Ensembl647,796,141 - 47,813,430 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204029
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl647,783,947 - 47,790,298 (-)Ensembl
GRCm38.p6 Ensembl647,807,013 - 47,813,364 (-)Ensembl
RefSeq Acc Id: NM_001368756   ⟹   NP_001355685
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39647,773,075 - 47,790,446 (-)NCBI
GRCm38647,796,141 - 47,813,512 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009787   ⟹   NP_033917
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39647,773,075 - 47,790,446 (-)NCBI
GRCm38647,796,141 - 47,813,512 (-)NCBI
MGSCv37647,746,140 - 47,763,511 (-)RGD
Celera648,328,916 - 48,346,203 (-)RGD
cM Map6 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033917   ⟸   NM_009787
- Peptide Label: isoform 2 precursor
- UniProtKB: P08003 (UniProtKB/Swiss-Prot),   A0A0R4J0Z1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001355685   ⟸   NM_001368756
- Peptide Label: isoform 1 precursor
RefSeq Acc Id: ENSMUSP00000076521   ⟸   ENSMUST00000077290
Protein Domains
Thioredoxin

Promoters
RGD ID:6839736
Promoter ID:MM_KWN:45872
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_009787
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36647,763,241 - 47,763,832 (-)MPROMDB
RGD ID:6889570
Promoter ID:EPDNEW_M8236
Type:initiation region
Name:Pdia4_1
Description:Mus musculus protein disulfide isomerase associated 4 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38647,813,361 - 47,813,421EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:104864 AgrOrtholog
Ensembl Genes ENSMUSG00000025823 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000076521 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000077290 ENTREZGENE, UniProtKB/TrEMBL
InterPro Disulphide_isomerase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDIA4_PDI_b UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_disulphide_isomerase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_diS-isomerase_A4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12304 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:104864 ENTREZGENE
NCBI Gene 12304 ENTREZGENE
Pfam Thioredoxin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pdia4 PhenoGen
PIRSF Disulphide_isom_A4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ER_TARGET UniProtKB/Swiss-Prot
  THIOREDOXIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THIOREDOXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52833 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs ER_PDI_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  pdi_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J0Z1 ENTREZGENE, UniProtKB/TrEMBL
  P08003 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary P15841 UniProtKB/Swiss-Prot
  Q3TT79 UniProtKB/Swiss-Prot
  Q3UJW0 UniProtKB/Swiss-Prot
  Q6NXW4 UniProtKB/Swiss-Prot
  Q8BMT8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-23 Pdia4  protein disulfide isomerase associated 4  U48620  cDNA sequence U48620  Data Merged 737654 PROVISIONAL