Rgs19 (regulator of G-protein signaling 19) - Rat Genome Database

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Gene: Rgs19 (regulator of G-protein signaling 19) Mus musculus
Analyze
Symbol: Rgs19
Name: regulator of G-protein signaling 19
RGD ID: 1551522
MGI Page MGI
Description: Predicted to enable G-protein alpha-subunit binding activity. Predicted to be involved in negative regulation of signal transduction. Predicted to be located in brush border and clathrin-coated vesicle. Is expressed in embryo; forelimb bud; palatal shelf epithelium; and primary palate epithelium. Orthologous to human RGS19 (regulator of G protein signaling 19).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2610042F04Rik; AI324841; AW547781; G-alpha interacting protein; GAIP; GAIP C-terminus-interacting protein; GIPC; GIPC PDZ domain containing family, member 1; Gipc1; Glut1; Glut1CIP; neurophilin1-IP; PDZ domain-containing protein GIPC1; regulator of G-protein signaling 19 interacting protein 1; RGS-GAIP interacting protein GIPC; RGS-GAIP-interacting protein; Rgs1; RGS19-interacting protein 1; Rgs19ip1; semaF cytoplasmic domain associated protein; semaF cytoplasmic domain associated protein 1; semaF cytoplasmic domain-associated protein 1; Semc; SEMCAP-1; Semcap1; Semcap1-pending; syne; synectin; Tax; Tax interacting protein, clone 2; TaxIP2; TIP; TIP-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392181,330,212 - 181,336,330 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2181,330,212 - 181,335,770 (-)EnsemblGRCm39 Ensembl
GRCm382181,688,419 - 181,694,537 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2181,688,419 - 181,693,977 (-)EnsemblGRCm38mm10GRCm38
MGSCv372181,423,128 - 181,428,629 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362181,617,829 - 181,623,330 (-)NCBIMGSCv36mm8
Celera2185,770,805 - 185,776,249 (-)NCBICelera
Cytogenetic Map2H4NCBI
cM Map2103.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1,3,5-trinitro-1,3,5-triazinane  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-bromohexadecanoic acid  (ISO)
2-methylcholine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
Allylamine  (ISO)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
Azoxymethane  (EXP)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP)
choline  (EXP,ISO)
cisplatin  (ISO)
clofibric acid  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (ISO)
dextran sulfate  (EXP)
diazinon  (ISO)
dibutyl phthalate  (EXP)
doxorubicin  (ISO)
ethanol  (EXP)
flavonoids  (ISO)
flusilazole  (EXP)
folic acid  (EXP)
gentamycin  (ISO)
hexaconazole  (EXP)
ketamine  (ISO)
L-methionine  (EXP)
lead diacetate  (EXP)
lipopolysaccharide  (ISO)
nickel atom  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (EXP)
pirinixic acid  (EXP)
quercetin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
Soman  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
triadimefon  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GIPC, a PDZ domain containing protein, interacts specifically with the C terminus of RGS-GAIP. De Vries L, etal., Proc Natl Acad Sci U S A 1998 Oct 13;95(21):12340-5.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10834841   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11342430   PMID:11829488   PMID:12477932   PMID:12507475   PMID:14610273   PMID:15489334   PMID:15761153  
PMID:16141072   PMID:16141073   PMID:16219326   PMID:17855383   PMID:18799693   PMID:20562099   PMID:20599498   PMID:21677750   PMID:22841956   PMID:24312373   PMID:24751948   PMID:24775271  
PMID:25766428   PMID:26238476   PMID:28190767   PMID:30683698   PMID:38355793  


Genomics

Comparative Map Data
Rgs19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392181,330,212 - 181,336,330 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2181,330,212 - 181,335,770 (-)EnsemblGRCm39 Ensembl
GRCm382181,688,419 - 181,694,537 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2181,688,419 - 181,693,977 (-)EnsemblGRCm38mm10GRCm38
MGSCv372181,423,128 - 181,428,629 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362181,617,829 - 181,623,330 (-)NCBIMGSCv36mm8
Celera2185,770,805 - 185,776,249 (-)NCBICelera
Cytogenetic Map2H4NCBI
cM Map2103.72NCBI
RGS19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382064,073,181 - 64,079,964 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2064,073,181 - 64,079,988 (-)EnsemblGRCh38hg38GRCh38
GRCh372062,704,534 - 62,711,317 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362062,174,978 - 62,181,768 (-)NCBINCBI36Build 36hg18NCBI36
Build 342062,174,980 - 62,181,309NCBI
Celera2059,390,619 - 59,397,513 (-)NCBICelera
Cytogenetic Map20q13.33NCBI
HuRef2059,438,299 - 59,444,668 (-)NCBIHuRef
CHM1_12062,605,550 - 62,612,340 (-)NCBICHM1_1
T2T-CHM13v2.02065,893,259 - 65,900,019 (-)NCBIT2T-CHM13v2.0
Rgs19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83189,182,041 - 189,190,494 (-)NCBIGRCr8
mRatBN7.23168,804,532 - 168,813,035 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3168,804,874 - 168,810,097 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3173,184,366 - 173,189,195 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03182,143,457 - 182,148,286 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03178,805,881 - 178,810,720 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03177,196,276 - 177,204,767 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3177,196,687 - 177,201,525 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03180,904,807 - 180,913,346 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43170,839,907 - 170,844,746 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13170,745,942 - 170,750,782 (-)NCBI
Celera3163,777,979 - 163,782,818 (+)NCBICelera
Cytogenetic Map3q43NCBI
Rgs19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955528183,066 - 185,703 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955528183,067 - 185,703 (+)NCBIChiLan1.0ChiLan1.0
RGS19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22169,891,049 - 69,897,800 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12069,883,060 - 69,889,794 (-)NCBINHGRI_mPanPan1
PanPan1.12061,987,428 - 61,993,936 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2061,987,428 - 61,993,936 (-)Ensemblpanpan1.1panPan2
RGS19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12447,512,987 - 47,518,282 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2447,512,552 - 47,519,247 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2446,646,828 - 46,652,108 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02448,651,886 - 48,657,163 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2448,651,451 - 48,654,348 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12447,496,513 - 47,501,791 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02447,620,957 - 47,626,215 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02448,359,943 - 48,365,223 (-)NCBIUU_Cfam_GSD_1.0
Rgs19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640195,797,576 - 195,802,860 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651411,251,202 - 11,255,994 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651411,251,293 - 11,256,461 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RGS19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,889,210 - 62,895,556 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11762,889,207 - 62,896,149 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RGS19
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12166,690 - 173,324 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2169,758 - 173,409 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605047,599,855 - 47,606,545 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rgs19
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474129,700,045 - 29,705,206 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474129,700,033 - 29,705,297 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rgs19
216 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2433
Count of miRNA genes:598
Interacting mature miRNAs:747
Transcripts:ENSMUST00000002532, ENSMUST00000108769, ENSMUST00000108771, ENSMUST00000108772, ENSMUST00000108776, ENSMUST00000108778, ENSMUST00000108779, ENSMUST00000124776, ENSMUST00000130712, ENSMUST00000143510, ENSMUST00000144476, ENSMUST00000165416
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302003Sluc17_msusceptibility to lung cancer 17 (mouse)Not determined2162433493181755017Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
1558748Vacq1_mvoluntary alcohol consumption QTL 1 (mouse)Not determined2178442338181515280Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156196464181755017Mouse
1301348Alcp5_malcohol preference locus 5 (mouse)Not determined2163486407181755017Mouse
1300676Prdt2_mprion disease incubation time 2 (mouse)Not determined2164515154181755017Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152329820181755017Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155823920181755017Mouse
1301677Alcp6_malcohol preference locus 6 (mouse)Not determined2163486407181755017Mouse
12738428Lfibq19_mliver fibrosis QTL 19 (mouse)2180732670181449318Mouse

Markers in Region
AI324841  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382181,688,494 - 181,688,614UniSTSGRCm38
MGSCv372181,423,199 - 181,423,319UniSTSGRCm37
Celera2185,770,876 - 185,770,996UniSTS
Cytogenetic Map2H4UniSTS
cM Map245.0UniSTS
Whitehead/MRC_RH22025.72UniSTS
Whitehead/MRC_RH22026.51UniSTS
Rgs19  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv372181,423,965 - 181,424,113UniSTSGRCm37
MGSCv372181,423,405 - 181,423,858UniSTSGRCm37
Celera2185,771,623 - 185,771,774UniSTS
Celera2185,771,066 - 185,771,516UniSTS
Cytogenetic Map2H4UniSTS
cM Map245.0UniSTS
cM Map245.0UniSTS
Rgs19  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382181,689,260 - 181,689,408UniSTSGRCm38
MGSCv372181,423,965 - 181,424,113UniSTSGRCm37
Celera2185,771,623 - 185,771,774UniSTS
Cytogenetic Map2H4UniSTS
cM Map245.0UniSTS
Rgs19  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382181,688,700 - 181,689,153UniSTSGRCm38
MGSCv372181,423,405 - 181,423,858UniSTSGRCm37
Celera2185,771,066 - 185,771,516UniSTS
Cytogenetic Map2H4UniSTS
cM Map245.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001291205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF535869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF535870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL845173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY138504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY138505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG085760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU694737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY540555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY549770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF751080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000002532   ⟹   ENSMUSP00000002532
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,215 - 181,335,770 (-)Ensembl
GRCm38.p6 Ensembl2181,688,422 - 181,693,977 (-)Ensembl
Ensembl Acc Id: ENSMUST00000019577   ⟹   ENSMUSP00000019577
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,379,306 - 84,391,323 (+)Ensembl
Ensembl Acc Id: ENSMUST00000108769   ⟹   ENSMUSP00000104400
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,300 - 181,335,723 (-)Ensembl
GRCm38.p6 Ensembl2181,688,507 - 181,693,930 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108771   ⟹   ENSMUSP00000104402
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,859 - 181,335,603 (-)Ensembl
GRCm38.p6 Ensembl2181,689,066 - 181,693,810 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108772   ⟹   ENSMUSP00000104403
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,811 - 181,335,740 (-)Ensembl
GRCm38.p6 Ensembl2181,689,018 - 181,693,947 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108776   ⟹   ENSMUSP00000104406
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,859 - 181,335,603 (-)Ensembl
GRCm38.p6 Ensembl2181,689,066 - 181,693,810 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108778   ⟹   ENSMUSP00000104408
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,297 - 181,333,610 (-)Ensembl
GRCm38.p6 Ensembl2181,688,504 - 181,691,817 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108779   ⟹   ENSMUSP00000104409
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,215 - 181,335,713 (-)Ensembl
GRCm38.p6 Ensembl2181,688,422 - 181,693,920 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124776
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,331,213 - 181,335,742 (-)Ensembl
GRCm38.p6 Ensembl2181,689,420 - 181,693,949 (-)Ensembl
Ensembl Acc Id: ENSMUST00000130712
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,331,455 - 181,335,700 (-)Ensembl
GRCm38.p6 Ensembl2181,689,662 - 181,693,907 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143510
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,331,128 - 181,335,424 (-)Ensembl
GRCm38.p6 Ensembl2181,689,335 - 181,693,631 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144476   ⟹   ENSMUSP00000120723
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,212 - 181,331,293 (-)Ensembl
GRCm38.p6 Ensembl2181,688,419 - 181,689,500 (-)Ensembl
Ensembl Acc Id: ENSMUST00000165416   ⟹   ENSMUSP00000129026
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2181,330,297 - 181,333,610 (-)Ensembl
GRCm38.p6 Ensembl2181,688,504 - 181,691,817 (-)Ensembl
Ensembl Acc Id: ENSMUST00000211985   ⟹   ENSMUSP00000148847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,379,315 - 84,388,995 (+)Ensembl
Ensembl Acc Id: ENSMUST00000212463   ⟹   ENSMUSP00000148824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl884,379,327 - 84,387,816 (+)Ensembl
RefSeq Acc Id: NM_001291205   ⟹   NP_001278134
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,212 - 181,333,610 (-)NCBI
GRCm382181,688,419 - 181,691,817 (-)NCBI
Celera2185,770,801 - 185,776,302 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291206   ⟹   NP_001278135
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,212 - 181,335,603 (-)NCBI
GRCm382181,688,419 - 181,693,810 (-)NCBI
Celera2185,770,801 - 185,776,302 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291207   ⟹   NP_001278136
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,212 - 181,335,770 (-)NCBI
GRCm382181,688,419 - 181,693,977 (-)NCBI
Celera2185,770,801 - 185,776,302 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291208   ⟹   NP_001278137
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,212 - 181,335,603 (-)NCBI
GRCm382181,688,419 - 181,693,810 (-)NCBI
Celera2185,770,801 - 185,776,302 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291209   ⟹   NP_001278138
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,212 - 181,335,770 (-)NCBI
GRCm382181,688,419 - 181,693,977 (-)NCBI
Celera2185,770,801 - 185,776,302 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291210   ⟹   NP_001278139
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,212 - 181,335,770 (-)NCBI
GRCm382181,688,419 - 181,693,977 (-)NCBI
Celera2185,770,801 - 185,776,302 (-)NCBI
Sequence:
RefSeq Acc Id: NM_026446   ⟹   NP_080722
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,212 - 181,335,770 (-)NCBI
GRCm382181,688,419 - 181,693,977 (-)NCBI
MGSCv372181,423,128 - 181,428,629 (-)RGD
Celera2185,770,801 - 185,776,302 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030251894   ⟹   XP_030107754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,215 - 181,335,690 (-)NCBI
GRCm382181,688,422 - 181,693,897 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030251895   ⟹   XP_030107755
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,215 - 181,336,330 (-)NCBI
GRCm382181,688,422 - 181,694,537 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030251896   ⟹   XP_030107756
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,215 - 181,335,693 (-)NCBI
GRCm382181,688,422 - 181,693,900 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030251897   ⟹   XP_030107757
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392181,330,215 - 181,335,761 (-)NCBI
GRCm382181,688,422 - 181,693,984 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001278134 (Get FASTA)   NCBI Sequence Viewer  
  NP_001278135 (Get FASTA)   NCBI Sequence Viewer  
  NP_001278136 (Get FASTA)   NCBI Sequence Viewer  
  NP_001278137 (Get FASTA)   NCBI Sequence Viewer  
  NP_001278138 (Get FASTA)   NCBI Sequence Viewer  
  NP_001278139 (Get FASTA)   NCBI Sequence Viewer  
  NP_080722 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107754 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107755 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107756 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107757 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH03838 (Get FASTA)   NCBI Sequence Viewer  
  AAN78095 (Get FASTA)   NCBI Sequence Viewer  
  AAN78096 (Get FASTA)   NCBI Sequence Viewer  
  AAN78097 (Get FASTA)   NCBI Sequence Viewer  
  AAO16180 (Get FASTA)   NCBI Sequence Viewer  
  AAO16181 (Get FASTA)   NCBI Sequence Viewer  
  BAB23098 (Get FASTA)   NCBI Sequence Viewer  
  BAB31703 (Get FASTA)   NCBI Sequence Viewer  
  BAC31284 (Get FASTA)   NCBI Sequence Viewer  
  BAE32870 (Get FASTA)   NCBI Sequence Viewer  
  EDL07441 (Get FASTA)   NCBI Sequence Viewer  
  EDL07442 (Get FASTA)   NCBI Sequence Viewer  
  EDL07443 (Get FASTA)   NCBI Sequence Viewer  
  EDL07444 (Get FASTA)   NCBI Sequence Viewer  
  EDL07445 (Get FASTA)   NCBI Sequence Viewer  
  EDL07446 (Get FASTA)   NCBI Sequence Viewer  
  EDL07447 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000002532
  ENSMUSP00000002532.3
  ENSMUSP00000104400
  ENSMUSP00000104400.2
  ENSMUSP00000104402
  ENSMUSP00000104402.2
  ENSMUSP00000104403
  ENSMUSP00000104403.2
  ENSMUSP00000104406
  ENSMUSP00000104406.2
  ENSMUSP00000104408
  ENSMUSP00000104408.2
  ENSMUSP00000104409.2
  ENSMUSP00000120723.2
  ENSMUSP00000129026.2
  ENSMUSP00000148824.2
  ENSMUSP00000148847.2
GenBank Protein Q9CX84 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_080722   ⟸   NM_026446
- Peptide Label: isoform b
- UniProtKB: Q99L50 (UniProtKB/Swiss-Prot),   Q9CX84 (UniProtKB/Swiss-Prot),   Q78NN4 (UniProtKB/TrEMBL),   Q8CGT5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278139   ⟸   NM_001291210
- Peptide Label: isoform e
- UniProtKB: Q9CX84 (UniProtKB/Swiss-Prot),   Q78NN4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278136   ⟸   NM_001291207
- Peptide Label: isoform c
- UniProtKB: Q8BFU4 (UniProtKB/TrEMBL),   Q8CGT5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278138   ⟸   NM_001291209
- Peptide Label: isoform d
- UniProtKB: B7ZCT0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278137   ⟸   NM_001291208
- Peptide Label: isoform c
- UniProtKB: Q8BFU4 (UniProtKB/TrEMBL),   Q8CGT5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278135   ⟸   NM_001291206
- Peptide Label: isoform b
- UniProtKB: Q99L50 (UniProtKB/Swiss-Prot),   Q9CX84 (UniProtKB/Swiss-Prot),   Q78NN4 (UniProtKB/TrEMBL),   Q8CGT5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278134   ⟸   NM_001291205
- Peptide Label: isoform a
- UniProtKB: B7ZCT1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030107755   ⟸   XM_030251895
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030107757   ⟸   XM_030251897
- Peptide Label: isoform X4
- UniProtKB: B7ZCT0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030107756   ⟸   XM_030251896
- Peptide Label: isoform X3
- UniProtKB: B7ZCT0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030107754   ⟸   XM_030251894
- Peptide Label: isoform X1
- UniProtKB: Q9CX84 (UniProtKB/Swiss-Prot),   Q99L50 (UniProtKB/Swiss-Prot),   Q78NN4 (UniProtKB/TrEMBL),   Q8CGT5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000120723   ⟸   ENSMUST00000144476
Ensembl Acc Id: ENSMUSP00000129026   ⟸   ENSMUST00000165416
Ensembl Acc Id: ENSMUSP00000002532   ⟸   ENSMUST00000002532
Ensembl Acc Id: ENSMUSP00000104400   ⟸   ENSMUST00000108769
Ensembl Acc Id: ENSMUSP00000104403   ⟸   ENSMUST00000108772
Ensembl Acc Id: ENSMUSP00000104402   ⟸   ENSMUST00000108771
Ensembl Acc Id: ENSMUSP00000104406   ⟸   ENSMUST00000108776
Ensembl Acc Id: ENSMUSP00000104408   ⟸   ENSMUST00000108778
Ensembl Acc Id: ENSMUSP00000104409   ⟸   ENSMUST00000108779
Ensembl Acc Id: ENSMUSP00000019577   ⟸   ENSMUST00000019577
Ensembl Acc Id: ENSMUSP00000148847   ⟸   ENSMUST00000211985
Ensembl Acc Id: ENSMUSP00000148824   ⟸   ENSMUST00000212463
Protein Domains
PDZ   RGS

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CX84-F1-model_v2 AlphaFold Q9CX84 1-216 view protein structure

Promoters
RGD ID:6832307
Promoter ID:MM_KWN:33661
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Spleen
Transcripts:OTTMUST00000040852
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362181,423,904 - 181,424,404 (-)MPROMDB
RGD ID:6832306
Promoter ID:MM_KWN:33662
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain
Transcripts:ENSMUST00000108778
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362181,426,399 - 181,426,899 (-)MPROMDB
RGD ID:6832304
Promoter ID:MM_KWN:33663
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000108769,   ENSMUST00000108779,   OTTMUST00000040842,   OTTMUST00000040848,   OTTMUST00000040849,   OTTMUST00000040851,   UC008ONC.1,   UC008OND.1,   UC008ONF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362181,428,316 - 181,428,872 (-)MPROMDB
RGD ID:6880160
Promoter ID:EPDNEW_M3531
Type:initiation region
Name:Rgs19_3
Description:Mus musculus regulator of G-protein signaling 19 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3532  EPDNEW_M3533  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382181,691,826 - 181,691,886EPDNEW
RGD ID:6880162
Promoter ID:EPDNEW_M3532
Type:multiple initiation site
Name:Rgs19_2
Description:Mus musculus regulator of G-protein signaling 19 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3531  EPDNEW_M3533  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382181,693,622 - 181,693,682EPDNEW
RGD ID:6880164
Promoter ID:EPDNEW_M3533
Type:initiation region
Name:Rgs19_1
Description:Mus musculus regulator of G-protein signaling 19 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3531  EPDNEW_M3532  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382181,693,949 - 181,694,009EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915153 AgrOrtholog
  MGI:1926252 AgrOrtholog
Ensembl Genes ENSMUSG00000002458 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSMUSG00000019433 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000002532 ENTREZGENE
  ENSMUST00000002532.9 UniProtKB/Swiss-Prot
  ENSMUST00000108769 ENTREZGENE
  ENSMUST00000108769.8 UniProtKB/TrEMBL
  ENSMUST00000108771 ENTREZGENE
  ENSMUST00000108771.2 UniProtKB/TrEMBL
  ENSMUST00000108772 ENTREZGENE
  ENSMUST00000108772.8 UniProtKB/TrEMBL
  ENSMUST00000108776 ENTREZGENE
  ENSMUST00000108776.8 UniProtKB/Swiss-Prot
  ENSMUST00000108778 ENTREZGENE
  ENSMUST00000108778.8 UniProtKB/TrEMBL
  ENSMUST00000108779.8 UniProtKB/TrEMBL
  ENSMUST00000144476.2 UniProtKB/TrEMBL
  ENSMUST00000165416.8 UniProtKB/Swiss-Prot
  ENSMUST00000211985.2 UniProtKB/TrEMBL
  ENSMUST00000212463.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.167.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.10.196.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.42.10 UniProtKB/TrEMBL
InterPro GIPC1/2/3 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RGS_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RGS_subdom1/3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RGS_subdomain_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56470 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1915153 ENTREZGENE
NCBI Gene 56470 ENTREZGENE
PANTHER PDZ DOMAIN-CONTAINING PROTEIN GIPC1 UniProtKB/TrEMBL
  PTHR12259 UniProtKB/TrEMBL
  REGULATOR OF G PROTEIN SIGNALING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  REGULATOR OF G-PROTEIN SIGNALING 19 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PDZ UniProtKB/TrEMBL
  RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rgs19 PhenoGen
PRINTS RGSPROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE PDZ UniProtKB/TrEMBL
  RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART PDZ UniProtKB/TrEMBL
  RGS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48097 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50156 UniProtKB/TrEMBL
UniProt A0A1D5RML2_MOUSE UniProtKB/TrEMBL
  A0A1D5RMN2_MOUSE UniProtKB/TrEMBL
  B7ZCS8_MOUSE UniProtKB/TrEMBL
  B7ZCT0 ENTREZGENE, UniProtKB/TrEMBL
  B7ZCT1 ENTREZGENE, UniProtKB/TrEMBL
  F6WK59_MOUSE UniProtKB/TrEMBL
  Q78NN4 ENTREZGENE, UniProtKB/TrEMBL
  Q8BFU4 ENTREZGENE, UniProtKB/TrEMBL
  Q8CGT5 ENTREZGENE, UniProtKB/TrEMBL
  Q99L50 ENTREZGENE
  Q9CTC4_MOUSE UniProtKB/TrEMBL
  Q9CX84 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q99L50 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-22 Rgs19  regulator of G-protein signaling 19  Semcap1-pending  semaF cytoplasmic domain associated protein 1  Data Merged 737654 PROVISIONAL
2024-08-21 Semcap1-pending  semaF cytoplasmic domain associated protein 1  Gipc1  GIPC PDZ domain containing family, member 1  Symbol and/or name change 5135510 APPROVED