Rpl14 (ribosomal protein L14) - Rat Genome Database
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Gene: Rpl14 (ribosomal protein L14) Mus musculus
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Symbol: Rpl14
Name: ribosomal protein L14
RGD ID: 1551517
MGI Page MGI
Description: Predicted to have RNA binding activity. Predicted to be involved in rRNA processing and ribosomal large subunit biogenesis. Predicted to localize to cytosolic large ribosomal subunit. Is expressed in several structures, including neural retina; nucleus pulposus; pancreas epithelium; and ureter. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human RPL14 (ribosomal protein L14); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 3100001N19Rik; 60S ribosomal protein L14; AA407502; AL022816; CAG-I; CAG-ISL-7; CTG-B33; L1; L14
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm15570   Gm16184   Rpl14-ps1  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399120,400,583 - 120,403,719 (+)NCBIGRCm39mm39
GRCm389120,571,517 - 120,574,653 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9120,571,444 - 120,574,654 (+)EnsemblGRCm38mm10GRCm38
MGSCv379120,480,634 - 120,483,770 (+)NCBIGRCm37mm9NCBIm37
MGSCv369120,420,214 - 120,423,350 (+)NCBImm8
Celera9121,041,119 - 121,044,256 (+)NCBICelera
Cytogenetic Map9F4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15226823   PMID:16141072  
PMID:16141073   PMID:18287559   PMID:18554416   PMID:19723774   PMID:21267068   PMID:21529712   PMID:21873635   PMID:22673621   PMID:23665500   PMID:24457600   PMID:26336360   PMID:26370502  
PMID:26584622   PMID:28378742   PMID:28712289   PMID:30457570   PMID:30595499   PMID:31040226   PMID:32325033  


Genomics

Comparative Map Data
Rpl14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399120,400,583 - 120,403,719 (+)NCBIGRCm39mm39
GRCm389120,571,517 - 120,574,653 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9120,571,444 - 120,574,654 (+)EnsemblGRCm38mm10GRCm38
MGSCv379120,480,634 - 120,483,770 (+)NCBIGRCm37mm9NCBIm37
MGSCv369120,420,214 - 120,423,350 (+)NCBImm8
Celera9121,041,119 - 121,044,256 (+)NCBICelera
Cytogenetic Map9F4NCBI
RPL14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl340,457,292 - 40,468,587 (+)EnsemblGRCh38hg38GRCh38
GRCh38340,457,339 - 40,468,587 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37340,498,783 - 40,503,863 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36340,473,805 - 40,478,863 (+)NCBINCBI36hg18NCBI36
Build 34340,473,818 - 40,478,862NCBI
Celera340,441,631 - 40,446,697 (+)NCBI
Cytogenetic Map3p22.1NCBI
HuRef340,542,849 - 40,547,946 (+)NCBIHuRef
CHM1_1340,449,375 - 40,454,457 (+)NCBICHM1_1
Rpl14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08129,240,528 - 129,243,400 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8129,240,528 - 129,243,402 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08128,438,421 - 128,441,293 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48125,582,095 - 125,584,968 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18125,601,831 - 125,604,704 (+)NCBI
Celera8119,428,067 - 119,430,939 (+)NCBICelera
Cytogenetic Map8q32NCBI
Rpl14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542029,426,694 - 29,435,126 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542029,430,757 - 29,434,669 (-)NCBIChiLan1.0ChiLan1.0
RPL14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1340,632,699 - 40,637,697 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl340,632,762 - 40,637,697 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0340,362,235 - 40,367,349 (+)NCBIMhudiblu_PPA_v0panPan3
RPL14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl239,907,479 - 9,911,114 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1239,907,479 - 9,911,114 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Rpl14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647329,402,874 - 29,406,065 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100739087
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1156,689,050 - 56,689,768 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2163,408,784 - 63,409,444 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RPL14
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1221,949,789 - 1,954,518 (+)NCBI
Rpl14
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473078,284,389 - 78,288,242 (-)NCBI

Position Markers
RH126508  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389120,574,155 - 120,574,346UniSTSGRCm38
MGSCv379120,483,272 - 120,483,463UniSTSGRCm37
Celera9121,043,758 - 121,043,949UniSTS
Cytogenetic Map9F4UniSTS
RH124609  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38745,325,437 - 45,325,629UniSTSGRCm38
GRCm389120,574,216 - 120,574,408UniSTSGRCm38
MGSCv379120,483,333 - 120,483,525UniSTSGRCm37
MGSCv37752,580,807 - 52,580,999UniSTSGRCm37
Celera9121,043,819 - 121,044,011UniSTS
Celera740,781,349 - 40,781,541UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map9F4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:54
Interacting mature miRNAs:54
Transcripts:ENSMUST00000165532
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000165532   ⟹   ENSMUSP00000131489
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9120,571,444 - 120,574,654 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213310
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9120,571,514 - 120,574,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000215063
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9120,573,589 - 120,574,435 (+)Ensembl
RefSeq Acc Id: ENSMUST00000216628
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9120,571,556 - 120,573,817 (+)Ensembl
RefSeq Acc Id: ENSMUST00000216990   ⟹   ENSMUSP00000150756
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9120,572,095 - 120,574,435 (+)Ensembl
RefSeq Acc Id: NM_025974   ⟹   NP_080250
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399120,400,583 - 120,403,719 (+)NCBI
GRCm389120,571,517 - 120,574,653 (+)ENTREZGENE
MGSCv379120,480,634 - 120,483,770 (+)RGD
Celera9121,041,119 - 121,044,256 (+)RGD
cM Map9 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_080250   ⟸   NM_025974
- UniProtKB: Q9CR57 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000150756   ⟸   ENSMUST00000216990
RefSeq Acc Id: ENSMUSP00000131489   ⟸   ENSMUST00000165532
Protein Domains
Ribosomal_L14e

Promoters
RGD ID:6845097
Promoter ID:MM_KWN:59178
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_4Hour,   Spleen
Transcripts:ENSMUST00000050737
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369120,479,746 - 120,480,647 (+)MPROMDB
RGD ID:6848462
Promoter ID:MM_ACW:52441
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day4,   BoneMarrow_0Hour,   Liver
Transcripts:RPL14.ESEP07,   RPL14.FSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369120,481,766 - 120,482,672 (+)MPROMDB
RGD ID:8671234
Promoter ID:EPDNEW_M13648
Type:initiation region
Name:Rpl14_1
Description:Mus musculus ribosomal protein L14 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389120,571,515 - 120,571,575EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914365 AgrOrtholog
Ensembl Genes ENSMUSG00000025794 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000131489 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000150756 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000165532 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000216990 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Rib_L2_dom2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_L14e_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_protein_L14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RPL14_KOW UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Translation_prot_SH3-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67115 UniProtKB/Swiss-Prot
MGD MGI:1914365 ENTREZGENE
NCBI Gene 67115 ENTREZGENE
PANTHER PTHR11127 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ribosomal_L14e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rpl14 PhenoGen
Superfamily-SCOP SSF50104 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1L1SUF6_MOUSE UniProtKB/TrEMBL
  Q9CR57 ENTREZGENE
  Q9CWK0_MOUSE UniProtKB/TrEMBL
  RL14_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q9D8Q1 UniProtKB/Swiss-Prot