Abcg2 (ATP binding cassette subfamily G member 2 (Junior blood group)) - Rat Genome Database

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Gene: Abcg2 (ATP binding cassette subfamily G member 2 (Junior blood group)) Mus musculus
Analyze
Symbol: Abcg2
Name: ATP binding cassette subfamily G member 2 (Junior blood group)
RGD ID: 1551496
MGI Page MGI
Description: Enables biotin transmembrane transporter activity; efflux transmembrane transporter activity; and riboflavin transmembrane transporter activity. Involved in biotin transport and riboflavin transport. Located in apical plasma membrane. Is expressed in several structures, including alimentary system; brain; early conceptus; genitourinary system; and hemolymphoid system. Used to study erythropoietic protoporphyria and hyperuricemia. Human ortholog(s) of this gene implicated in gout; hematologic cancer (multiple); renal cell carcinoma; and toxic encephalopathy. Orthologous to human ABCG2 (ATP binding cassette subfamily G member 2 (Junior blood group)).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ABC15; ABCP; AI428558; ATP-binding cassette sub-family G member 2; ATP-binding cassette, sub-family G (WHITE), member 2; Bc; BCRP; Bcrp1; breast cancer resistance protein 1 homolog; broad substrate specificity ATP-binding cassette transporter ABCG2; mitoxantrone resistance protein 1; MXR; MXR1; urate exporter
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39658,561,476 - 58,669,436 (+)NCBIGRCm39mm39
GRCm39 Ensembl658,561,508 - 58,672,661 (+)Ensembl
GRCm38658,584,491 - 58,692,451 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl658,584,523 - 58,695,676 (+)EnsemblGRCm38mm10GRCm38
MGSCv37658,546,666 - 58,642,445 (+)NCBIGRCm37mm9NCBIm37
MGSCv36658,526,250 - 58,622,029 (+)NCBImm8
Celera660,752,972 - 60,848,739 (+)NCBICelera
Cytogenetic Map6B3NCBI
cM Map627.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(20S)-ginsenoside Rg3  (ISO)
(S)-nicotine  (EXP)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-Hydroxypyrene  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 17-glucosiduronic acid  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2',5'-Dihydroxychalcone  (ISO)
2'-(4-ethoxyphenyl)-5-(4-methylpiperazin-1-yl)-2,5'-bibenzimidazole  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,3,3-tetrafluoro-2-(heptafluoropropoxy)propanoic acid  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-(4-iodo-2,5-dimethoxyphenyl)-1-methylethylamine  (ISO)
2-acetamidofluorene  (EXP,ISO)
2-tert-butylhydroquinone  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-methylcholanthrene  (ISO)
4'-epidoxorubicin  (ISO)
4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid  (ISO)
4-hydroxyphenyl retinamide  (EXP)
4-methylumbelliferone  (EXP)
4-nonylphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
5-methoxypsoralen  (ISO)
6-(4-chlorophenyl)imidazo[2,1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime  (ISO)
6-bromoindirubin-3'-oxime  (ISO)
6alpha-methylprednisolone  (ISO)
7-Hydroxymethotrexate  (ISO)
8-(4-chlorophenylthio)-cAMP  (EXP)
8-Br-cAMP  (ISO)
abacavir  (EXP,ISO)
actinomycin D  (ISO)
acyclovir  (EXP,ISO)
aflatoxin B1  (ISO)
albendazole S-oxide  (EXP,ISO)
all-trans-retinoic acid  (ISO)
allopurinol  (EXP)
AM-251  (ISO)
ammonium chloride  (ISO)
amosite asbestos  (ISO)
amphetamine  (ISO)
anandamide  (ISO)
androst-4-ene-3,17-dione  (ISO)
arsenous acid  (ISO)
atazanavir sulfate  (ISO)
atorvastatin calcium  (EXP)
ATP  (ISO)
Azaspiracid  (ISO)
azathioprine  (ISO)
beclomethasone  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
Benzo[k]fluoranthene  (ISO)
benzoylhypaconine  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bis-4-nitrophenyl phosphate  (EXP)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
buspirone  (ISO)
Butylbenzyl phthalate  (ISO)
butyric acid  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
carbonyl sulfide  (ISO)
carboplatin  (ISO)
celecoxib  (ISO)
cerivastatin  (ISO)
chenodeoxycholic acid  (ISO)
chlordecone  (EXP,ISO)
chloroprene  (EXP)
chloroquine  (ISO)
chlorpromazine  (ISO)
chlorpyrifos  (ISO)
cholesterol  (ISO)
choline  (EXP,ISO)
chromium atom  (ISO)
chromium(6+)  (EXP)
chrysin  (EXP,ISO)
cimetidine  (EXP,ISO)
ciprofloxacin  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
clozapine  (ISO)
cobalt dichloride  (ISO)
colforsin daropate hydrochloride  (ISO)
corticosterone  (ISO)
crizotinib  (ISO)
curcumin  (ISO)
cyazofamid  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (EXP,ISO)
daidzein  (EXP)
dantrolene  (EXP)
daunorubicin  (ISO)
DDE  (ISO)
DDT  (ISO)
deoxycholic acid  (ISO)
depsipeptide  (ISO)
dexamethasone  (ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibenzoylmethane  (ISO)
dibutyl phthalate  (EXP,ISO)
dichloroacetic acid  (EXP)
dieldrin  (ISO)
diethyl phthalate  (ISO)
Diferuloylputrescine  (ISO)
digoxin  (ISO)
diisobutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
E3040  (EXP)
endosulfan  (ISO)
erlotinib hydrochloride  (ISO)
estriol  (ISO)
estrone  (ISO)
estrone 3-sulfate  (ISO)
ethanol  (EXP,ISO)
etoposide  (ISO)
everolimus  (EXP)
flavone  (ISO)
flavones  (ISO)
flutamide  (ISO)
folic acid  (EXP,ISO)
fulvestrant  (ISO)
furan  (ISO)
gamma-hexachlorocyclohexane  (ISO)
gefitinib  (ISO)
genistein  (ISO)
ginsenoside Re  (ISO)
ginsenoside Rg1  (ISO)
glutathione  (ISO)
glyburide  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
glycyrrhetinate  (ISO)
glycyrrhetinic acid  (ISO)
glyphosate  (ISO)
GW 4064  (ISO)
haloperidol  (ISO)
heptachlor  (ISO)
hydrogen peroxide  (ISO)
Hypaconitine  (EXP,ISO)
indole-3-methanol  (ISO)
indoxyl sulfate  (ISO)
irinotecan  (EXP,ISO)
iron atom  (EXP)
iron(0)  (EXP)
isoprenaline  (EXP)
ivermectin  (EXP)
kainic acid  (EXP)
ketoconazole  (ISO)
kynurenic acid  (ISO)
L-methionine  (EXP,ISO)
lapatinib  (ISO)
lead diacetate  (ISO)
ledipasvir  (ISO)
lipopolysaccharide  (EXP,ISO)
lithocholic acid  (EXP)
lucifer yellow dye  (ISO)
lupeol  (EXP)
luteolin  (ISO)
LY294002  (ISO)
MeIQx  (EXP)
menadione  (ISO)
mercury atom  (ISO)
mercury dibromide  (ISO)
mercury dichloride  (EXP,ISO)
mercury(0)  (ISO)
Mesaconitine  (EXP,ISO)
methamphetamine  (ISO)
methotrexate  (EXP,ISO)
methoxsalen  (ISO)
methylmercury chloride  (EXP,ISO)
metiram  (ISO)
mifepristone  (ISO)
milbemycin  (EXP,ISO)
mitoxantrone  (EXP,ISO)
Mitragynine  (ISO)
MK 571  (ISO)
mometasone furoate  (ISO)
morphine  (ISO)
N-benzoylglycine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-hydroxy-PhIP  (EXP)
N-nitrosodimethylamine  (ISO)
naloxone  (ISO)
naproxen  (ISO)
nefazodone  (ISO)
nelfinavir  (EXP,ISO)
nicotine  (EXP)
nilotinib  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
nitrofurantoin  (EXP,ISO)
notoginsenoside R1  (ISO)
novobiocin  (ISO)
ochratoxin A  (EXP,ISO)
okadaic acid  (ISO)
olanzapine  (ISO)
oleanolic acid  (EXP)
oleic acid  (ISO)
oltipraz  (ISO)
omeprazole  (ISO)
oroxylin A  (ISO)
oxaliplatin  (ISO)
oxfendazole  (EXP,ISO)
ozone  (EXP)
p-chloromercuribenzoic acid  (ISO)
paclitaxel  (ISO)
paliperidone palmitate  (ISO)
panobinostat  (ISO)
pantoprazole  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (EXP,ISO)
phenformin  (ISO)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (ISO)
pheophorbide a  (ISO)
PhIP  (EXP,ISO)
pirinixic acid  (EXP,ISO)
pitavastatin  (EXP,ISO)
pitavastatin(1-)  (EXP,ISO)
Potassium 2,6-dihydroxytriazinecarboxylate  (EXP)
potassium dichromate  (ISO)
pravastatin  (ISO)
prazosin  (EXP,ISO)
probenecid  (EXP)
prochloraz  (EXP)
progesterone  (ISO)
pterostilbene  (EXP)
quercetin  (EXP,ISO)
quetiapine fumarate  (ISO)
reserpine  (ISO)
resmethrin  (ISO)
resveratrol  (EXP,ISO)
rhodamine 123  (ISO)
rifampicin  (ISO)
risperidone  (ISO)
rosuvastatin calcium  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
SCH 23390  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium hydrogencarbonate  (ISO)
Soman  (ISO)
stilben-4-ol  (EXP)
streptozocin  (EXP)
sulfapyridine  (ISO)
sulfasalazine  (ISO)
sulindac sulfide  (ISO)
sulpiride  (ISO)
sunitinib  (ISO)
Sunset Yellow FCF  (ISO)
tamoxifen  (EXP,ISO)
tartrazine  (ISO)
taurocholic acid  (EXP)
taxane  (ISO)
tectochrysin  (ISO)
temozolomide  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tolfenamic acid  (EXP)
toluene  (ISO)
topotecan  (EXP,ISO)
trans-piceid  (EXP)
triamcinolone  (ISO)
triamterene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
Triptolide  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
venetoclax  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)
vorinostat  (EXP)
warfarin  (ISO)
WIN 55212-2  (ISO)
zearalenone  (EXP,ISO)
zidovudine  (EXP,ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal bile color  (IAGP)
abnormal bone marrow cell morphology/development  (IAGP)
abnormal endoplasmic reticulum morphology  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal hematopoietic system morphology/development  (IAGP)
abnormal hepatocyte morphology  (IAGP)
abnormal homeostasis  (IAGP)
abnormal intestine physiology  (IAGP)
abnormal kidney physiology  (IAGP)
abnormal mitochondrial crista morphology  (IAGP)
abnormal mitochondrial morphology  (IAGP)
abnormal mitochondrial physiology  (IAGP)
abnormal oxidative phosphorylation  (IAGP)
abnormal respiratory electron transport chain  (IAGP)
amyloid beta deposits  (IAGP)
decreased blood urea nitrogen level  (IEA)
decreased liver glycogen level  (IAGP)
decreased renal glomerular filtration rate  (IAGP)
fused cornea and lens  (IEA)
hepatic steatosis  (IAGP)
impaired glucose tolerance  (IAGP)
increased blood uric acid level  (IAGP)
increased circulating bilirubin level  (IAGP)
increased circulating cholesterol level  (IEA)
increased circulating glucose level  (IAGP)
increased circulating HDL cholesterol level  (IEA)
increased circulating insulin level  (IAGP)
increased circulating insulin-like growth factor I level  (IAGP)
increased circulating potassium level  (IAGP)
increased physiological sensitivity to xenobiotic  (IAGP)
increased porphyrin level  (IAGP)
increased urine osmolality  (IAGP)
increased urine sodium level  (IAGP)
increased urine uric acid level  (IAGP)
liver inflammation  (IAGP)
no abnormal phenotype detected  (IAGP)
oxidative stress  (IAGP)
phototoxicity  (IAGP)
porphyria  (IAGP)
References

References - curated
1. null
2. Au A, etal., Biomed Pharmacother. 2014 Apr;68(3):343-9. doi: 10.1016/j.biopha.2014.01.009. Epub 2014 Feb 7.
3. Bartholomae S, etal., Pediatr Blood Cancer. 2016 Feb;63(2):242-7. doi: 10.1002/pbc.25785. Epub 2015 Oct 29.
4. Campa D, etal., Int J Cancer. 2012 Aug 15;131(4):803-12. doi: 10.1002/ijc.26436. Epub 2011 Nov 28.
5. Campbell PK, etal., Leuk Res. 2011 Oct;35(10):1321-9. doi: 10.1016/j.leukres.2011.05.004.
6. Delord M, etal., Oncotarget. 2013 Oct;4(10):1582-91.
7. Easterday MC, etal., Dev Biol 2003 Dec 15;264(2):309-22.
8. Erdilyi DJ, etal., Pharmacogenomics J. 2008 Oct;8(5):321-7.
9. Faneyte IF, etal., Clin Cancer Res. 2002 Apr;8(4):1068-74.
10. Korenaga Y, etal., Int J Cancer. 2005 Nov 10;117(3):431-4.
11. Liu YC, etal., Biochem Pharmacol. 2007 Dec 15;74(12):1766-72. Epub 2007 Aug 21.
12. McGill MR and Jaeschke H, Pharm Res. 2013 Sep;30(9):2174-87. doi: 10.1007/s11095-013-1007-6. Epub 2013 Mar 6.
13. MGD data from the GO Consortium
14. MGD IEA
15. Ogura J, etal., Biol Pharm Bull. 2008 May;31(5):1032-5.
16. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
17. OMIM Disease Annotation Pipeline
18. Pipeline to import KEGG annotations from KEGG into RGD
19. Pipeline to import Pathway Interaction Database annotations from NCI into RGD
20. Pipeline to import SMPDB annotations from SMPDB into RGD
21. RGD automated import pipeline
22. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
23. RGD automated import pipeline for gene-chemical interactions
24. Salimizand H, etal., Tumour Biol. 2016 Jan;37(1):791-8. doi: 10.1007/s13277-015-3874-4. Epub 2015 Aug 7.
25. Sauerbrey A, etal., Br J Haematol. 2002 Jul;118(1):147-50.
26. Shimano K, etal., Am J Pathol 2003 Jul;163(1):3-9.
27. Steinbach D, etal., Leukemia. 2002 Aug;16(8):1443-7.
28. Sugimoto R, etal., Kidney Int. 2017 Mar;91(3):658-670. doi: 10.1016/j.kint.2016.09.041. Epub 2016 Dec 15.
29. Suvannasankha A, etal., Br J Haematol. 2004 Nov;127(4):392-8.
30. Thorn CF, etal., Pharmacogenet Genomics. 2011 Jul;21(7):440-6. doi: 10.1097/FPC.0b013e32833ffb56.
31. Turner JG, etal., Blood. 2006 Dec 1;108(12):3881-9. Epub 2006 Aug 17.
32. Uno S, etal., Biopharm Drug Dispos. 2009 Jan;30(1):49-54.
33. van Vliet EA, etal., Epilepsia. 2005 Oct;46(10):1569-80.
34. Woodward OM, etal., Proc Natl Acad Sci U S A. 2009 Jun 23;106(25):10338-42. doi: 10.1073/pnas.0901249106. Epub 2009 Jun 8.
35. Xu D, etal., Acta Pharmacol Sin. 2014 Sep;35(9):1215-25. doi: 10.1038/aps.2014.39. Epub 2014 Aug 25.
36. Yang C, etal., Oncotarget. 2015 Sep 29;6(29):27714-24. doi: 10.18632/oncotarget.4663.
Additional References at PubMed
PMID:9850061   PMID:10349636   PMID:10485464   PMID:10708515   PMID:11036110   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11239426   PMID:11489994   PMID:11533706   PMID:12218177  
PMID:12429862   PMID:12477932   PMID:12649196   PMID:12851395   PMID:12904583   PMID:14610273   PMID:14681479   PMID:14697368   PMID:15044468   PMID:15126373   PMID:15489334   PMID:15546952  
PMID:15567169   PMID:15685169   PMID:15722455   PMID:15805252   PMID:16000399   PMID:16002779   PMID:16141072   PMID:16141073   PMID:16458078   PMID:16484343   PMID:16651435   PMID:16885162  
PMID:17082346   PMID:17135398   PMID:17145775   PMID:17229149   PMID:17314268   PMID:17437964   PMID:17446265   PMID:17519960   PMID:17524480   PMID:17638908   PMID:17696988   PMID:17707334  
PMID:17785426   PMID:17975156   PMID:17978498   PMID:18079276   PMID:18356544   PMID:18523872   PMID:18688650   PMID:18787193   PMID:18799693   PMID:18841445   PMID:19032939   PMID:19067785  
PMID:19107196   PMID:19265661   PMID:19265662   PMID:19422048   PMID:19443695   PMID:19567673   PMID:19679677   PMID:19802874   PMID:19996279   PMID:20103600   PMID:20145144   PMID:20216549  
PMID:20460386   PMID:20518788   PMID:20538997   PMID:20626554   PMID:20664173   PMID:20670210   PMID:20829509   PMID:20950350   PMID:20963470   PMID:21073982   PMID:21139040   PMID:21159928  
PMID:21351087   PMID:21718815   PMID:21816982   PMID:21828252   PMID:21873635   PMID:21881209   PMID:21949413   PMID:22004608   PMID:22009787   PMID:22058337   PMID:22116099   PMID:22134889  
PMID:22232434   PMID:22396548   PMID:22454535   PMID:22473008   PMID:22536451   PMID:22545122   PMID:22578166   PMID:22581381   PMID:22707564   PMID:22736306   PMID:22767648   PMID:22828996  
PMID:23032069   PMID:23136123   PMID:23287578   PMID:23298861   PMID:23333829   PMID:23422148   PMID:23436212   PMID:23454352   PMID:23461902   PMID:23588114   PMID:23596979   PMID:23662173  
PMID:23665398   PMID:23827160   PMID:23868912   PMID:23954234   PMID:24037730   PMID:24189494   PMID:24194600   PMID:24297888   PMID:24334255   PMID:24647572   PMID:24670665   PMID:24727496  
PMID:24940679   PMID:25117410   PMID:25122876   PMID:25380981   PMID:25868794   PMID:26199091   PMID:26250653   PMID:26361725   PMID:26416771   PMID:26465636   PMID:26507673   PMID:26739701  
PMID:27012188   PMID:27286290   PMID:27454381   PMID:27507172   PMID:27616577   PMID:27617863   PMID:27626380   PMID:27955673   PMID:28216407   PMID:28270772   PMID:28463231   PMID:28720764  
PMID:28790147   PMID:28935760   PMID:28990372   PMID:29091768   PMID:29574357   PMID:30042379   PMID:30705084   PMID:30858238   PMID:30897286   PMID:31118497   PMID:31136764   PMID:31461347  
PMID:31555729   PMID:32217099   PMID:32239172   PMID:32303561   PMID:32488095   PMID:33171190   PMID:34062171  


Genomics

Comparative Map Data
Abcg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39658,561,476 - 58,669,436 (+)NCBIGRCm39mm39
GRCm39 Ensembl658,561,508 - 58,672,661 (+)Ensembl
GRCm38658,584,491 - 58,692,451 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl658,584,523 - 58,695,676 (+)EnsemblGRCm38mm10GRCm38
MGSCv37658,546,666 - 58,642,445 (+)NCBIGRCm37mm9NCBIm37
MGSCv36658,526,250 - 58,622,029 (+)NCBImm8
Celera660,752,972 - 60,848,739 (+)NCBICelera
Cytogenetic Map6B3NCBI
cM Map627.82NCBI
ABCG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl488,090,150 - 88,231,628 (-)EnsemblGRCh38hg38GRCh38
GRCh38488,090,264 - 88,231,626 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37489,011,416 - 89,152,778 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36489,230,440 - 89,299,035 (-)NCBINCBI36hg18NCBI36
Build 34489,370,018 - 89,436,901NCBI
Celera486,303,350 - 86,371,627 (-)NCBI
Cytogenetic Map4q22.1NCBI
HuRef484,757,887 - 84,903,974 (-)NCBIHuRef
CHM1_1488,988,243 - 89,128,985 (-)NCBICHM1_1
Abcg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2487,676,241 - 87,802,757 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl487,745,319 - 87,802,409 (+)Ensembl
Rnor_6.0488,765,441 - 88,890,268 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl488,832,178 - 88,890,621 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04153,587,206 - 153,712,481 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4487,502,584 - 87,560,017 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1487,747,008 - 87,804,442 (+)NCBI
Celera482,507,731 - 82,564,802 (+)NCBICelera
Cytogenetic Map4q24NCBI
Abcg2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495547412,365,903 - 12,408,715 (+)NCBIChiLan1.0ChiLan1.0
ABCG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1491,101,321 - 91,170,418 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl491,101,321 - 91,170,157 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0480,379,108 - 80,446,641 (-)NCBIMhudiblu_PPA_v0panPan3
ABCG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13211,443,778 - 11,517,674 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3211,443,780 - 11,517,674 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3230,372,283 - 30,510,869 (+)NCBI
ROS_Cfam_1.03211,496,580 - 11,635,323 (-)NCBI
UMICH_Zoey_3.13211,580,165 - 11,719,079 (-)NCBI
UNSW_CanFamBas_1.03211,406,011 - 11,544,317 (-)NCBI
UU_Cfam_GSD_1.03228,373,259 - 28,501,671 (+)NCBI
UU_Cfam_GSD_1.03228,508,945 - 28,549,001 (+)NCBI
ABCG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8130,775,472 - 130,998,660 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18130,853,414 - 130,945,388 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28140,193,291 - 140,228,765 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ABCG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1736,458,110 - 36,599,753 (-)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603715,206,025 - 15,348,744 (-)NCBIVero_WHO_p1.0

Position Markers
AI428558  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38658,692,263 - 58,692,360UniSTSGRCm38
MGSCv37658,642,257 - 58,642,354UniSTSGRCm37
Celera660,848,551 - 60,848,648UniSTS
Cytogenetic Map6B3UniSTS
cM Map628.5UniSTS
Whitehead/MRC_RH6571.82UniSTS
UniSTS:225011  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384147,425,951 - 147,426,130UniSTSGRCm38
GRCm38658,603,686 - 58,603,865UniSTSGRCm38
MGSCv374146,800,060 - 146,800,239UniSTSGRCm37
MGSCv37658,553,680 - 58,553,859UniSTSGRCm37
Celera660,759,987 - 60,760,166UniSTS
Cytogenetic Map6B3UniSTS
Cytogenetic Map4E1UniSTS
cM Map628.5UniSTS
Abcg2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6B3UniSTS
cM Map627.82UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268671322775Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2831405962314181Mouse
4141454Obrq4_mobesity resistance QTL 4 (mouse)Not determined3172656565726677Mouse
12880425V25Dq5_mvitamin D inactive form serum level QTL 5 (mouse)63270000066700000Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3285065078238974Mouse
1300959Lxw2_mlupus BXSB x NZW 2 (mouse)Not determined63389528167895420Mouse
11252142Mom12_mModifier of Min 12 (mouse)63389528167895420Mouse
1300767Aliq4_macute lung injury QTL 4 (mouse)Not determined63629634770296450Mouse
1357539Bsbob3_mBSB obesity 3 (mouse)Not determined63647147170471591Mouse
4141094Hrtr1_mheart rate 1 (mouse)Not determined3676447870764478Mouse
14746995Manh60_mmandible shape 60 (mouse)63722567771225677Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
1301326Trbv4c2_mT cell receptor beta variable 4 (mouse)Not determined64089129671379171Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64160000075600000Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64211637376116515Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64211637376116515Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64211637376116515Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64211637376116515Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64382681377811523Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64382681377811523Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64382681377811523Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64382681377811523Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64382681377811523Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64382681377811523Mouse
10043885Cia6c_mcollagen induced arthritis QTL 6c (mouse)Not determined64446587171119467Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
4140983Srilp_msleep response to influenza, light phase (mouse)Not determined4872655675447710Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir328mmu-miR-328-3pOncomiRDBexternal_infoNANA22453125
Mir328mmu-miR-328-3pOncomiRDBexternal_infoNANA19270061
Mir212mmu-miR-212-3pOncomiRDBexternal_infoNANA22241070

Predicted Target Of
Summary Value
Count of predictions:840
Count of miRNA genes:434
Interacting mature miRNAs:496
Transcripts:ENSMUST00000031822, ENSMUST00000114294, ENSMUST00000124542, ENSMUST00000134426, ENSMUST00000143447, ENSMUST00000143752, ENSMUST00000145161, ENSMUST00000145685, ENSMUST00000147213, ENSMUST00000148008
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001381925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001381926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001381927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011241362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA008579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC121855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC121859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF103875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF140218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI428558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO039662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU597840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU597841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU597842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU597843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU597844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF662878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000031822   ⟹   ENSMUSP00000031822
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,573,656 - 58,672,661 (+)Ensembl
GRCm38.p6 Ensembl658,596,671 - 58,695,676 (+)Ensembl
RefSeq Acc Id: ENSMUST00000114294   ⟹   ENSMUSP00000109933
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,617,549 - 58,669,496 (+)Ensembl
GRCm38.p6 Ensembl658,640,564 - 58,692,511 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124542
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,617,531 - 58,641,768 (+)Ensembl
GRCm38.p6 Ensembl658,640,546 - 58,664,783 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134426
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,654,606 - 58,661,622 (+)Ensembl
GRCm38.p6 Ensembl658,677,621 - 58,684,637 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143447
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,640,394 - 58,641,731 (+)Ensembl
GRCm38.p6 Ensembl658,663,409 - 58,664,746 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143752   ⟹   ENSMUSP00000138608
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,617,545 - 58,669,854 (+)Ensembl
GRCm38.p6 Ensembl658,640,560 - 58,692,869 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145161   ⟹   ENSMUSP00000122924
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,617,545 - 58,642,229 (+)Ensembl
GRCm38.p6 Ensembl658,640,560 - 58,665,244 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145685   ⟹   ENSMUSP00000138703
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,651,553 - 58,669,360 (+)Ensembl
GRCm38.p6 Ensembl658,674,568 - 58,692,375 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147213   ⟹   ENSMUSP00000120940
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,561,508 - 58,641,515 (+)Ensembl
GRCm38.p6 Ensembl658,584,523 - 58,664,530 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148008   ⟹   ENSMUSP00000114454
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,572,960 - 58,632,793 (+)Ensembl
GRCm38.p6 Ensembl658,595,975 - 58,655,808 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203146   ⟹   ENSMUSP00000145435
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,617,549 - 58,667,529 (+)Ensembl
GRCm38.p6 Ensembl658,640,564 - 58,690,544 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204924
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,561,512 - 58,563,545 (+)Ensembl
GRCm38.p6 Ensembl658,584,527 - 58,586,560 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204948   ⟹   ENSMUSP00000144876
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl658,617,567 - 58,642,229 (+)Ensembl
GRCm38.p6 Ensembl658,640,582 - 58,665,244 (+)Ensembl
RefSeq Acc Id: NM_001355477   ⟹   NP_001342406
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,561,518 - 58,669,434 (+)NCBI
GRCm38658,584,533 - 58,692,449 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001381925   ⟹   NP_001368854
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,572,945 - 58,669,434 (+)NCBI
GRCm38658,595,960 - 58,692,449 (+)NCBI
RefSeq Acc Id: NM_001381926   ⟹   NP_001368855
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,572,945 - 58,669,434 (+)NCBI
GRCm38658,595,960 - 58,692,449 (+)NCBI
RefSeq Acc Id: NM_001381927   ⟹   NP_001368856
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,617,531 - 58,669,434 (+)NCBI
GRCm38658,640,546 - 58,692,449 (+)NCBI
RefSeq Acc Id: NM_011920   ⟹   NP_036050
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,573,657 - 58,669,436 (+)NCBI
GRCm38658,596,672 - 58,692,451 (+)NCBI
MGSCv37658,546,666 - 58,642,445 (+)RGD
Celera660,752,972 - 60,848,739 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006506150   ⟹   XP_006506213
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,617,490 - 58,669,436 (+)NCBI
GRCm38658,640,501 - 58,692,451 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011241362   ⟹   XP_011239664
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,561,476 - 58,669,436 (+)NCBI
GRCm38658,584,491 - 58,692,451 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255399   ⟹   XP_030111259
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,573,024 - 58,669,436 (+)NCBI
GRCm38658,596,593 - 58,692,451 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255400   ⟹   XP_030111260
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39658,612,503 - 58,669,436 (+)NCBI
GRCm38658,635,518 - 58,692,451 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001342406 (Get FASTA)   NCBI Sequence Viewer  
  NP_001368854 (Get FASTA)   NCBI Sequence Viewer  
  NP_001368855 (Get FASTA)   NCBI Sequence Viewer  
  NP_001368856 (Get FASTA)   NCBI Sequence Viewer  
  NP_036050 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506213 (Get FASTA)   NCBI Sequence Viewer  
  XP_011239664 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111259 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111260 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD09189 (Get FASTA)   NCBI Sequence Viewer  
  AAD54216 (Get FASTA)   NCBI Sequence Viewer  
  AAH53730 (Get FASTA)   NCBI Sequence Viewer  
  ADX30640 (Get FASTA)   NCBI Sequence Viewer  
  ADX30641 (Get FASTA)   NCBI Sequence Viewer  
  ADX30642 (Get FASTA)   NCBI Sequence Viewer  
  ADX30643 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87979 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87980 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87981 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87982 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87983 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87984 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87985 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87986 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87987 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87988 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87989 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87990 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87991 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87992 (Get FASTA)   NCBI Sequence Viewer  
  AGZ87993 (Get FASTA)   NCBI Sequence Viewer  
  BAE25098 (Get FASTA)   NCBI Sequence Viewer  
  EDK98744 (Get FASTA)   NCBI Sequence Viewer  
  Q7TMS5 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_036050   ⟸   NM_011920
- UniProtKB: Q7TMS5 (UniProtKB/Swiss-Prot),   A0A0R4J0B6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506213   ⟸   XM_006506150
- Peptide Label: isoform X1
- UniProtKB: Q7TMS5 (UniProtKB/Swiss-Prot),   A0A0R4J0B6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011239664   ⟸   XM_011241362
- Peptide Label: isoform X1
- UniProtKB: Q7TMS5 (UniProtKB/Swiss-Prot),   A0A0R4J0B6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001342406   ⟸   NM_001355477
RefSeq Acc Id: XP_030111259   ⟸   XM_030255399
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030111260   ⟸   XM_030255400
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001368854   ⟸   NM_001381925
RefSeq Acc Id: NP_001368855   ⟸   NM_001381926
RefSeq Acc Id: NP_001368856   ⟸   NM_001381927
RefSeq Acc Id: ENSMUSP00000122924   ⟸   ENSMUST00000145161
RefSeq Acc Id: ENSMUSP00000145435   ⟸   ENSMUST00000203146
RefSeq Acc Id: ENSMUSP00000031822   ⟸   ENSMUST00000031822
RefSeq Acc Id: ENSMUSP00000138608   ⟸   ENSMUST00000143752
RefSeq Acc Id: ENSMUSP00000120940   ⟸   ENSMUST00000147213
RefSeq Acc Id: ENSMUSP00000144876   ⟸   ENSMUST00000204948
RefSeq Acc Id: ENSMUSP00000138703   ⟸   ENSMUST00000145685
RefSeq Acc Id: ENSMUSP00000114454   ⟸   ENSMUST00000148008
RefSeq Acc Id: ENSMUSP00000109933   ⟸   ENSMUST00000114294
Promoters
RGD ID:6838805
Promoter ID:MM_KWN:46182
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000052783
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36658,545,201 - 58,545,701 (+)MPROMDB
RGD ID:6838802
Promoter ID:MM_KWN:46183
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   MEF_B6
Transcripts:OTTMUST00000052779
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36658,546,376 - 58,547,052 (+)MPROMDB
RGD ID:6889848
Promoter ID:EPDNEW_M8375
Type:initiation region
Name:Abcg2_4
Description:Mus musculus ATP binding cassette subfamily G member 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8377  EPDNEW_M8378  EPDNEW_M8376  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38658,584,529 - 58,584,589EPDNEW
RGD ID:6889856
Promoter ID:EPDNEW_M8376
Type:initiation region
Name:Abcg2_3
Description:Mus musculus ATP binding cassette subfamily G member 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8375  EPDNEW_M8377  EPDNEW_M8378  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38658,584,890 - 58,584,950EPDNEW
RGD ID:6838804
Promoter ID:MM_KWN:46184
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000114294,   OTTMUST00000052780,   OTTMUST00000052782,   OTTMUST00000053404
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36658,589,576 - 58,590,627 (+)MPROMDB
RGD ID:6889852
Promoter ID:EPDNEW_M8377
Type:multiple initiation site
Name:Abcg2_2
Description:Mus musculus ATP binding cassette subfamily G member 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8375  EPDNEW_M8378  EPDNEW_M8376  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38658,596,628 - 58,596,688EPDNEW
RGD ID:6889854
Promoter ID:EPDNEW_M8378
Type:initiation region
Name:Abcg2_1
Description:Mus musculus ATP binding cassette subfamily G member 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8375  EPDNEW_M8377  EPDNEW_M8376  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38658,640,546 - 58,640,606EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1347061 AgrOrtholog
Ensembl Genes ENSMUSG00000029802 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000031822 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000109933 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000114454 UniProtKB/TrEMBL
  ENSMUSP00000120940 UniProtKB/TrEMBL
  ENSMUSP00000122924 UniProtKB/TrEMBL
  ENSMUSP00000138608 UniProtKB/TrEMBL
  ENSMUSP00000138703 UniProtKB/TrEMBL
  ENSMUSP00000144876 UniProtKB/TrEMBL
  ENSMUSP00000145435 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000031822 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000114294 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000143752 UniProtKB/TrEMBL
  ENSMUST00000145161 UniProtKB/TrEMBL
  ENSMUST00000145685 UniProtKB/TrEMBL
  ENSMUST00000147213 UniProtKB/TrEMBL
  ENSMUST00000148008 UniProtKB/TrEMBL
  ENSMUST00000203146 UniProtKB/TrEMBL
  ENSMUST00000204948 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_2_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_transporter-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABCG2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABCG_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:26357 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1347061 ENTREZGENE
NCBI Gene 26357 ENTREZGENE
PANTHER PTHR48041:SF92 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ABC2_membrane UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC2_membrane_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_tran UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB ABCG2 RGD
PhenoGen Abcg2 PhenoGen
PROSITE ABC_TRANSPORTER_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SWA2_MOUSE UniProtKB/TrEMBL
  A0A0R4J0B6 ENTREZGENE, UniProtKB/TrEMBL
  ABCG2_MOUSE UniProtKB/Swiss-Prot
  D3YVG8_MOUSE UniProtKB/TrEMBL
  D3YZX5_MOUSE UniProtKB/TrEMBL
  D3Z150_MOUSE UniProtKB/TrEMBL
  G0TEB1_MOUSE UniProtKB/TrEMBL
  Q3UQE4_MOUSE UniProtKB/TrEMBL
  Q7TMS5 ENTREZGENE
  S4R2E1_MOUSE UniProtKB/TrEMBL
  S4R2M4_MOUSE UniProtKB/TrEMBL
  W8DLN2_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q9R004 UniProtKB/Swiss-Prot
  Q9Z1T0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-22 Abcg2  ATP binding cassette subfamily G member 2 (Junior blood group)    ATP-binding cassette, sub-family G (WHITE), member 2  Symbol and/or name change 5135510 APPROVED
2011-08-17 Abcg2  ATP-binding cassette, sub-family G (WHITE), member 2  Abcg2  ATP-binding cassette, sub-family G (WHITE), member 2  Symbol and/or name change 5135510 APPROVED