Rnf181 (ring finger protein 181) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Rnf181 (ring finger protein 181) Mus musculus
Analyze
Symbol: Rnf181
Name: ring finger protein 181
RGD ID: 1551424
MGI Page MGI
Description: Is expressed in several structures, including adrenal gland; central nervous system; liver lobe; olfactory epithelium; and thymus primordium. Orthologous to human RNF181 (ring finger protein 181); INTERACTS WITH 1,2-dimethylhydrazine; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1700047F16Rik; 2500002L14Rik; 6230415N01Rik; C77350; E3 ubiquitin-protein ligase RNF181; MGC103058; RING-type E3 ubiquitin transferase RNF181
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm47949  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39672,336,695 - 72,343,977 (-)NCBIGRCm39mm39
GRCm39 Ensembl672,336,697 - 72,343,939 (-)Ensembl
GRCm38672,359,712 - 72,366,994 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl672,359,714 - 72,366,956 (-)EnsemblGRCm38mm10GRCm38
MGSCv37672,309,708 - 72,312,375 (-)NCBIGRCm37mm9NCBIm37
MGSCv36672,289,223 - 72,291,890 (-)NCBImm8
Celera674,450,157 - 74,452,824 (-)NCBICelera
Cytogenetic Map6C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12819125   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17015433  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:28190767   PMID:29459677   PMID:30333137   PMID:32325033  


Genomics

Comparative Map Data
Rnf181
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39672,336,695 - 72,343,977 (-)NCBIGRCm39mm39
GRCm39 Ensembl672,336,697 - 72,343,939 (-)Ensembl
GRCm38672,359,712 - 72,366,994 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl672,359,714 - 72,366,956 (-)EnsemblGRCm38mm10GRCm38
MGSCv37672,309,708 - 72,312,375 (-)NCBIGRCm37mm9NCBIm37
MGSCv36672,289,223 - 72,291,890 (-)NCBImm8
Celera674,450,157 - 74,452,824 (-)NCBICelera
Cytogenetic Map6C1NCBI
RNF181
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl285,595,725 - 85,597,708 (+)EnsemblGRCh38hg38GRCh38
GRCh38285,593,823 - 85,597,708 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37285,822,868 - 85,824,831 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36285,676,348 - 85,678,342 (+)NCBINCBI36hg18NCBI36
Celera285,651,121 - 85,653,115 (+)NCBI
Cytogenetic Map2p11.2NCBI
HuRef285,719,976 - 85,721,970 (+)NCBIHuRef
CHM1_1285,752,643 - 85,754,637 (+)NCBICHM1_1
Rnf181
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24104,414,586 - 104,421,433 (-)NCBI
Rnor_6.0 Ensembl4100,222,106 - 100,228,809 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04100,222,087 - 100,228,809 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04164,992,846 - 164,999,568 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44105,664,599 - 105,671,321 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14105,909,080 - 105,915,802 (-)NCBI
Celera493,568,589 - 93,575,318 (-)NCBICelera
Cytogenetic Map4q31NCBI
Rnf181
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554241,907,745 - 1,910,037 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554241,907,745 - 1,910,037 (-)NCBIChiLan1.0ChiLan1.0
RNF181
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A87,198,416 - 87,200,692 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A87,198,416 - 87,200,692 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A85,648,424 - 85,650,282 (+)NCBIMhudiblu_PPA_v0panPan3
RNF181
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1739,484,086 - 39,486,426 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11739,483,755 - 39,486,468 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Rnf181
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049367121,673,977 - 1,676,601 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNF181
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl359,171,075 - 59,174,237 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1359,172,394 - 59,174,215 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2362,233,469 - 62,235,337 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RNF181
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11421,560,025 - 21,561,849 (-)NCBI
ChlSab1.1 Ensembl1421,555,903 - 21,561,938 (-)Ensembl
Rnf181
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474917,542,952 - 17,545,069 (-)NCBI

Position Markers
RH126149  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38672,359,733 - 72,359,958UniSTSGRCm38
MGSCv37672,309,727 - 72,309,952UniSTSGRCm37
Celera674,450,176 - 74,450,401UniSTS
Cytogenetic Map6C1UniSTS
Whitehead/MRC_RH6719.46UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3285065078238974Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64160000075600000Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64211637376116515Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64211637376116515Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64211637376116515Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64211637376116515Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64382681377811523Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64382681377811523Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64382681377811523Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64382681377811523Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64382681377811523Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64382681377811523Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
4140983Srilp_msleep response to influenza, light phase (mouse)Not determined4872655675447710Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3131
Count of miRNA genes:533
Interacting mature miRNAs:659
Transcripts:ENSMUST00000069580, ENSMUST00000069595, ENSMUST00000114095, ENSMUST00000125554, ENSMUST00000126065, ENSMUST00000129233, ENSMUST00000130064, ENSMUST00000133978, ENSMUST00000136707, ENSMUST00000149296, ENSMUST00000151063, ENSMUST00000154098
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001331167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_138579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_138580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_138581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA154118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC116115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB851224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC083119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY086964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY772494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK387918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV652726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000069580   ⟹   ENSMUSP00000066128
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,359,714 - 72,362,432 (-)Ensembl
RefSeq Acc Id: ENSMUST00000069595   ⟹   ENSMUSP00000070370
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,359,714 - 72,362,393 (-)Ensembl
RefSeq Acc Id: ENSMUST00000114095   ⟹   ENSMUSP00000109729
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,288 - 72,362,382 (-)Ensembl
RefSeq Acc Id: ENSMUST00000125554   ⟹   ENSMUSP00000138229
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,359,872 - 72,362,360 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126065   ⟹   ENSMUSP00000138309
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,278 - 72,362,363 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129233   ⟹   ENSMUSP00000138365
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,277 - 72,362,390 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130064   ⟹   ENSMUSP00000115187
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,084 - 72,361,396 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133978
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,613 - 72,362,428 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136707
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,418 - 72,361,067 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149296   ⟹   ENSMUSP00000138442
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,251 - 72,362,344 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151063   ⟹   ENSMUSP00000138670
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,336 - 72,362,365 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154098   ⟹   ENSMUSP00000138327
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,360,245 - 72,366,956 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205399
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,361,013 - 72,361,995 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206319
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,359,714 - 72,362,123 (-)Ensembl
RefSeq Acc Id: NM_001331167   ⟹   NP_001318096
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,343,955 (-)NCBI
GRCm38672,359,712 - 72,366,972 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331168   ⟹   NP_001318097
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331169   ⟹   NP_001318098
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331170   ⟹   NP_001318099
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331171   ⟹   NP_001318100
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331172   ⟹   NP_001318101
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331173   ⟹   NP_001318102
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NM_025607   ⟹   NP_079883
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
MGSCv37672,309,708 - 72,312,375 (-)RGD
Celera674,450,157 - 74,452,824 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_138579
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NR_138580
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: NR_138581
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,695 - 72,339,415 (-)NCBI
GRCm38672,359,712 - 72,362,432 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255540   ⟹   XP_030111400
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,697 - 72,343,977 (-)NCBI
GRCm38672,359,714 - 72,366,994 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255541   ⟹   XP_030111401
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,697 - 72,343,679 (-)NCBI
GRCm38672,359,714 - 72,366,602 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255542   ⟹   XP_030111402
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,697 - 72,343,954 (-)NCBI
GRCm38672,359,714 - 72,366,971 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255543   ⟹   XP_030111403
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,336,697 - 72,343,455 (-)NCBI
GRCm38672,359,714 - 72,366,472 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001318096 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318097 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318098 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318099 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318100 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318101 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318102 (Get FASTA)   NCBI Sequence Viewer  
  NP_079883 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111400 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111401 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111402 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111403 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH83119 (Get FASTA)   NCBI Sequence Viewer  
  BAB27224 (Get FASTA)   NCBI Sequence Viewer  
  BAB31462 (Get FASTA)   NCBI Sequence Viewer  
  BAC25424 (Get FASTA)   NCBI Sequence Viewer  
  BAE35371 (Get FASTA)   NCBI Sequence Viewer  
  BAE39106 (Get FASTA)   NCBI Sequence Viewer  
  BAE39174 (Get FASTA)   NCBI Sequence Viewer  
  BAE39485 (Get FASTA)   NCBI Sequence Viewer  
  BAE39684 (Get FASTA)   NCBI Sequence Viewer  
  BAE39939 (Get FASTA)   NCBI Sequence Viewer  
  BAE40520 (Get FASTA)   NCBI Sequence Viewer  
  EDK98971 (Get FASTA)   NCBI Sequence Viewer  
  EDK98972 (Get FASTA)   NCBI Sequence Viewer  
  EDK98973 (Get FASTA)   NCBI Sequence Viewer  
  EDK98974 (Get FASTA)   NCBI Sequence Viewer  
  EDK98975 (Get FASTA)   NCBI Sequence Viewer  
  Q9CY62 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_079883   ⟸   NM_025607
- Peptide Label: isoform 1
- UniProtKB: Q9CY62 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001318096   ⟸   NM_001331167
- Peptide Label: isoform 2
- UniProtKB: Q9CY62 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001318097   ⟸   NM_001331168
- Peptide Label: isoform 3
- UniProtKB: Q9CY62 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001318098   ⟸   NM_001331169
- Peptide Label: isoform 2
- UniProtKB: Q9CY62 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001318099   ⟸   NM_001331170
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001318100   ⟸   NM_001331171
- Peptide Label: isoform 5
- UniProtKB: D3YUJ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001318101   ⟸   NM_001331172
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001318102   ⟸   NM_001331173
- Peptide Label: isoform 7
RefSeq Acc Id: XP_030111400   ⟸   XM_030255540
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030111402   ⟸   XM_030255542
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030111401   ⟸   XM_030255541
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030111403   ⟸   XM_030255543
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000138229   ⟸   ENSMUST00000125554
RefSeq Acc Id: ENSMUSP00000115187   ⟸   ENSMUST00000130064
RefSeq Acc Id: ENSMUSP00000138309   ⟸   ENSMUST00000126065
RefSeq Acc Id: ENSMUSP00000138670   ⟸   ENSMUST00000151063
RefSeq Acc Id: ENSMUSP00000138442   ⟸   ENSMUST00000149296
RefSeq Acc Id: ENSMUSP00000138365   ⟸   ENSMUST00000129233
RefSeq Acc Id: ENSMUSP00000138327   ⟸   ENSMUST00000154098
RefSeq Acc Id: ENSMUSP00000109729   ⟸   ENSMUST00000114095
RefSeq Acc Id: ENSMUSP00000070370   ⟸   ENSMUST00000069595
RefSeq Acc Id: ENSMUSP00000066128   ⟸   ENSMUST00000069580
Protein Domains
RING-type

Promoters
RGD ID:6839858
Promoter ID:MM_KWN:46455
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:OTTMUST00000055733,   OTTMUST00000055734
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,311,096 - 72,311,877 (-)MPROMDB
RGD ID:6839859
Promoter ID:MM_KWN:46456
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000114095,   OTTMUST00000055725,   OTTMUST00000055726,   OTTMUST00000055727,   OTTMUST00000055728,   OTTMUST00000055729,   OTTMUST00000055730,   OTTMUST00000055731,   OTTMUST00000055735,   OTTMUST00000055736
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,312,281 - 72,313,302 (-)MPROMDB
RGD ID:6839860
Promoter ID:MM_KWN:46457
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:UC009CIK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,316,469 - 72,316,969 (-)MPROMDB
RGD ID:6890012
Promoter ID:EPDNEW_M8457
Type:initiation region
Name:Rnf181_1
Description:Mus musculus ring finger protein 181 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38672,362,393 - 72,362,453EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913760 AgrOrtholog
Ensembl Genes ENSMUSG00000055850 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSMUSG00000102720 UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000066128 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000070370 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000109729 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000115187 UniProtKB/TrEMBL
  ENSMUSP00000138229 UniProtKB/TrEMBL
  ENSMUSP00000138309 UniProtKB/TrEMBL
  ENSMUSP00000138327 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000138365 UniProtKB/TrEMBL
  ENSMUSP00000138442 UniProtKB/TrEMBL
  ENSMUSP00000138670 UniProtKB/TrEMBL
  ENSMUSP00000141228 UniProtKB/Swiss-Prot
  ENSMUSP00000141725 UniProtKB/Swiss-Prot
  ENSMUSP00000142055 UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000069580 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000069595 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000114095 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000125554 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000126065 UniProtKB/TrEMBL
  ENSMUST00000129233 UniProtKB/TrEMBL
  ENSMUST00000130064 UniProtKB/TrEMBL
  ENSMUST00000149296 UniProtKB/TrEMBL
  ENSMUST00000151063 UniProtKB/TrEMBL
  ENSMUST00000154098 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000193509 UniProtKB/Swiss-Prot
  ENSMUST00000194461 UniProtKB/Swiss-Prot
  ENSMUST00000194851 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Znf_RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66510 UniProtKB/Swiss-Prot
MGD MGI:1913760 ENTREZGENE
NCBI Gene 66510 ENTREZGENE
Pfam zf-RING_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rnf181 PhenoGen
PROSITE ZF_RING_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YUJ1 ENTREZGENE, UniProtKB/TrEMBL
  F6SLH0_MOUSE UniProtKB/TrEMBL
  Q9CY62 ENTREZGENE, UniProtKB/Swiss-Prot
  S4R1H9_MOUSE UniProtKB/TrEMBL
  S4R1P6_MOUSE UniProtKB/TrEMBL
  S4R1T4_MOUSE UniProtKB/TrEMBL
  S4R201_MOUSE UniProtKB/TrEMBL
  S4R2J5_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q8CEU6 UniProtKB/Swiss-Prot
  Q9D2T4 UniProtKB/Swiss-Prot