Rasl11a (RAS-like, family 11, member A)

Gene: Rasl11a (RAS-like, family 11, member A) Mus musculus

Analyze

Symbol:

Rasl11a

Name:

RAS-like, family 11, member A

RGD ID:

1551355

MGI Page

MGI

Description:

Predicted to enable G protein activity and GTP binding activity. Involved in positive regulation of transcription by RNA polymerase I. Located in nucleolus. Orthologous to human RASL11A (RAS like family 11 member A).

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

1110065D03Rik; AI852031; MGC144485; ras-like protein family member 11A

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RASL11A (RAS like family 11 member A)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Rasl11a (RAS-like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rasl11a (RAS like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RASL11A (RAS like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RASL11A (RAS like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rasl11a (RAS like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RASL11A (RAS like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RASL11A (RAS like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rasl11a (RAS like family 11 member A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Rasl11a (RAS-like family 11 member A)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RASL11A (RAS like family 11 member A)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rasl11a (RAS-like, family 11, member A)	Alliance	DIOPT (InParanoid\|OrthoInspector\|SonicParanoid\|ZFIN)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	146,781,881 - 146,784,536 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	146,781,881 - 146,784,537 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	146,845,071 - 146,847,726 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	146,845,071 - 146,847,726 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	147,656,647 - 147,659,302 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	147,154,591 - 147,158,076 (+)	NCBI		MGSCv36	mm8
Celera	5	144,831,850 - 144,834,500 (+)	NCBI		Celera
Cytogenetic Map	5	G3	NCBI
cM Map	5	86.56	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Colorectal Neoplasms (ISO)

endometriosis (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',4,4',5-pentachlorobiphenyl (ISO)

3,4-methylenedioxymethamphetamine (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4-hydroxyphenyl retinamide (EXP)

9-cis-retinoic acid (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (EXP)

bexarotene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

calcidiol (ISO)

calcitriol (ISO)

carbon nanotube (EXP)

CGP 52608 (ISO)

chloroprene (EXP)

choline (EXP)

chrysene (EXP)

cisplatin (ISO)

cocaine (ISO)

copper atom (EXP)

copper(0) (EXP)

crocidolite asbestos (ISO)

dexamethasone (ISO)

dibutyl phthalate (EXP)

dimethylarsinic acid (EXP)

endosulfan (ISO)

folic acid (EXP)

furan (ISO)

gentamycin (ISO)

glycidol (ISO)

indometacin (ISO)

ketamine (ISO)

L-methionine (EXP)

lead(0) (ISO)

Licochalcone B (ISO)

lipopolysaccharide (ISO)

manganese(II) chloride (ISO)

menadione (ISO)

methamphetamine (ISO)

methylarsonic acid (EXP)

methylisothiazolinone (ISO)

methylmercury chloride (ISO)

N-methyl-4-phenylpyridinium (ISO)

O-methyleugenol (ISO)

ozone (EXP)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

potassium chromate (ISO)

progesterone (ISO)

rotenone (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SCH 23390 (ISO)

sodium arsenate (EXP)

sodium arsenite (EXP,ISO)

sotorasib (ISO)

sulforaphane (ISO)

sunitinib (ISO)

testosterone (ISO)

tetraphene (EXP)

titanium dioxide (EXP,ISO)

trametinib (ISO)

tunicamycin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of transcription by RNA polymerase I (IDA)

Cellular Component

nucleolus (IDA)

nucleus (IEA)

Molecular Function

G protein activity (IEA)

GTP binding (IEA)

GTPase activity (IEA)

hydrolase activity (IEA)

nucleotide binding (IEA)

protein binding (IPI)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:15033445	PMID:16141072	PMID:16141073	PMID:20168301	PMID:21267068	PMID:21677750	PMID:35974052
PMID:37625400

Genomics

Comparative Map Data

Rasl11a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	146,781,881 - 146,784,536 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	146,781,881 - 146,784,537 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	146,845,071 - 146,847,726 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	146,845,071 - 146,847,726 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	147,656,647 - 147,659,302 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	147,154,591 - 147,158,076 (+)	NCBI		MGSCv36	mm8
Celera	5	144,831,850 - 144,834,500 (+)	NCBI		Celera
Cytogenetic Map	5	G3	NCBI
cM Map	5	86.56	NCBI

RASL11A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	27,270,830 - 27,275,192 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	27,270,830 - 27,275,192 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	27,844,967 - 27,849,329 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	26,742,464 - 26,745,827 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	26,742,463 - 26,745,827	NCBI
Celera	13	8,913,338 - 8,916,701 (+)	NCBI		Celera
Cytogenetic Map	13	q12.2	NCBI
HuRef	13	8,666,540 - 8,669,903 (+)	NCBI		HuRef
CHM1_1	13	27,812,914 - 27,816,273 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	13	26,491,553 - 26,495,914 (+)	NCBI		T2T-CHM13v2.0

Rasl11a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	13,372,023 - 13,374,784 (-)	NCBI		GRCr8
mRatBN7.2	12	8,258,148 - 8,260,909 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	8,258,159 - 8,262,576 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	9,059,337 - 9,062,088 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	9,682,512 - 9,685,263 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	8,705,955 - 8,708,706 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	9,986,150 - 9,990,284 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	9,985,928 - 9,990,284 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	12,093,829 - 12,098,070 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	8,705,993 - 8,710,040 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	8,735,920 - 8,739,968 (-)	NCBI
Celera	12	10,075,495 - 10,079,542 (-)	NCBI		Celera
Cytogenetic Map	12	p11	NCBI

Rasl11a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955497	6,695,210 - 6,697,964 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955497	6,695,354 - 6,697,425 (+)	NCBI	ChiLan1.0	ChiLan1.0

RASL11A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	26,861,741 - 26,869,820 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	17,975,947 - 17,981,391 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	8,559,930 - 8,563,339 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	26,905,680 - 26,909,057 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	26,905,680 - 26,909,057 (+)	Ensembl	panpan1.1		panPan2

RASL11A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	12,316,034 - 12,318,740 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	12,316,060 - 12,318,638 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	12,379,377 - 12,382,068 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	12,447,808 - 12,450,494 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	12,447,808 - 12,450,506 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	12,338,807 - 12,341,490 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	12,333,660 - 12,336,331 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	12,378,532 - 12,381,205 (-)	NCBI		UU_Cfam_GSD_1.0

Rasl11a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	173,410,886 - 173,418,790 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	22,538,353 - 22,541,268 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	22,538,643 - 22,541,327 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RASL11A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	4,746,403 - 4,748,893 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	4,746,408 - 4,748,895 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	4,209,105 - 4,211,548 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RASL11A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	6,463,317 - 6,466,747 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	6,463,950 - 6,466,494 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666057	37,935,923 - 37,939,343 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rasl11a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624776	11,237,231 - 11,263,010 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624776	11,237,278 - 11,256,378 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rasl11a
115 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	88
Count of miRNA genes:	83
Interacting mature miRNAs:	86
Transcripts:	ENSMUST00000031646
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301362	Prnr1_m	prion resistance 1 (mouse)			Not determined		5	89418876	146787935	Mouse
1301226	Bbaa2_m	B.burgdorferi-associated arthritis 2 (mouse)			Not determined		5	115156883	149157015	Mouse
1300827	Cora1_m	correlation in cytokine production 1 (mouse)			Not determined		5	115156883	149157015	Mouse
1301857	Bglq14_m	body growth late QTL 14 (mouse)			Not determined		5	118948964	151758149	Mouse
4141081	Nidd7k_m	Nidd7 on KK-A (mouse)			Not determined			119945037	149347326	Mouse
11528552	Scram1_m	spinal cord resistance to astrocytoma modifier 1 (mouse)					5	121455402	151758149	Mouse
1301986	Bpq4_m	blood pressure QTL 4 (mouse)			Not determined		5	121555236	151758149	Mouse
1302079	Lbw3_m	lupus NZB x NZW 3 (mouse)			Not determined		5	124700335	151758149	Mouse
1301363	Pbwg13_m	postnatal body weight growth 13 (mouse)			Not determined		5	125133457	151758149	Mouse
4141218	Ath24_m	atherosclerosis 24 (mouse)			Not determined			129520084	151758149	Mouse
12880406	Jcdq2_m	joint cartilage degeneration QTL 2 (mouse)					5	129787831	151758149	Mouse
11049557	Lmr26_m	leishmaniasis resistance 26 (mouse)					5	133925558	151758149	Mouse
13504735	Ifvrq7_m	influenza virus resistance QTL 7 (mouse)					5	139509801	151658149	Mouse
13504737	Ifvrq5_m	influenza virus resistance QTL 5 (mouse)					5	139509801	151658149	Mouse
13504734	Ifvrq4_m	influenza virus resistance QTL 4 (mouse)					5	139985755	151658149	Mouse

Markers in Region

AI852031

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	146,847,400 - 146,847,508	UniSTS	GRCm38
MGSCv37	5	147,658,976 - 147,659,084	UniSTS	GRCm37
Celera	5	144,834,177 - 144,834,285	UniSTS
Cytogenetic Map	5	G3	UniSTS
Whitehead/MRC_RH	5	1738.3	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC124828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK004371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC118009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BK001706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000031646 ⟹ ENSMUSP00000031646

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	146,781,881 - 146,784,536 (+)	Ensembl
GRCm38.p6 Ensembl	5	146,845,071 - 146,847,726 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000198570

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	146,782,575 - 146,784,192 (+)	Ensembl
GRCm38.p6 Ensembl	5	146,845,765 - 146,847,382 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000249135

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	146,781,958 - 146,784,537 (+)	Ensembl

RefSeq Acc Id:

NM_026864 ⟹ NP_081140

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	146,781,881 - 146,784,536 (+)	NCBI
GRCm38	5	146,845,071 - 146,847,726 (+)	ENTREZGENE
MGSCv37	5	147,656,647 - 147,659,302 (+)	RGD
Celera	5	144,831,850 - 144,834,500 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

GGAGGCGCCAGAGGCAGCCACCGCGCTCCCGGAGCTCTTTAAAATCCAAGAGCCTGGGCAGCAC
CGCTGGCCGCGCCACATCCCGGCGCTGTTGTGTCCGCGCGTATCCAGGCGGCTCTCGTGCAACG
CGGTCTCGGGACGCGCCCATGCGGCCGCTCACCATGTCTGGGCACTTTCTGCTGGCCCCCATCC
CGGAGTCCTCCTCTGACTACCTCCTGCCCAAGGACATCAAGCTGGCCGTGCTGGGAGCGGGTTG
TGTGGGCAAGAGCGCAATGATTGTGCGCTTCTTGACCAAGAGATTCATCGGCGACTACGAACCC
AACACAGGCAAACTGTATTCGAGACTCGTCTATGTGGAGGGGGACCAGCTATCCCTACAGATCC
AGGACACTCCGGGAGGCATTCAGGCCCAAGACAGCCTCAGTCAAATGGTGGATTCTCTGACCAA
AAGTGTGCACTGGGCAGAGGGCTTTCTGCTGGTTTATTCCATAACAGACTATGAGAGCTACCAA
TCCATCCGGCCCCTTTACCAGCACATCCGGAAGGTCCACCCTGATGGAAAAGCCCCCATCTTCA
TCGTGGGAAACAAAGGAGACCTTTTGCATGCCCGGCAGGTGCAGACACACGAAGGCCTTCAGCT
AGCTAATGAGCTGGGCAGTCTCTTCCTTGAAATTTCTACTAGTGAGAACTACGAAGACGTCTGT
GATGTGTTCCAACATCTCTGCAAAGAAGTGATCAAGGTGCACAGACTCGGTGGGGAACGGAGGA
GGGCATCCGTCATTCCCCGGCCTCGATCCCCCAACATGCAGGACCTGAAGAGGCGCTTCAGGCA
GGCCCTGTCCTCCAAAGCGAAAGCGTCCTCCGCCCTGGGGTGATCCAGCTCAGATAGACTGGCG
GGTTGCTATTATTACTACTAGACATTTGTGCAGCCACAAAGACTGGCCCTTTCCCCCTTTAAAA
CATATTCAGAGTTTATTTTTATAATGACTTTATTGGCTTTCAAGTGTATGTATATTTCTGAAAA
TTCAAACAATGGATTTTTTTTAAATGTGTTTTTTTTTTTTTGTTTTTTTGTTTTTACTGTAACT
GTTAGCCACTCTTCCATTAAAGGCAAAATGGCAATACT

hide sequence

Protein Sequences


Protein RefSeqs	NP_081140	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI18010	(Get FASTA)	NCBI Sequence Viewer
	BAE43176	(Get FASTA)	NCBI Sequence Viewer
	DAA02248	(Get FASTA)	NCBI Sequence Viewer
	EDL05817	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000031646
	ENSMUSP00000031646.8
GenBank Protein	Q6IMB1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_081140 ⟸ NM_026864

- UniProtKB:

Q148R6 (UniProtKB/Swiss-Prot), Q6IMB1 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MRPLTMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGCVGKSAMIVRFLTKRFIGDYEPNTGKLY
SRLVYVEGDQLSLQIQDTPGGIQAQDSLSQMVDSLTKSVHWAEGFLLVYSITDYESYQSIRPLY
QHIRKVHPDGKAPIFIVGNKGDLLHARQVQTHEGLQLANELGSLFLEISTSENYEDVCDVFQHL
CKEVIKVHRLGGERRRASVIPRPRSPNMQDLKRRFRQALSSKAKASSALG

hide sequence

RefSeq Acc Id:

ENSMUSP00000031646 ⟸ ENSMUST00000031646

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6IMB1-F1-model_v2	AlphaFold	Q6IMB1	1-242	view protein structure

Promoters

RGD ID:

6888790

Promoter ID:

EPDNEW_M7846

Type:

multiple initiation site

Name:

Rasl11a_1

Description:

Mus musculus RAS-like, family 11, member A , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	146,845,139 - 146,845,199	EPDNEW

RGD ID:

6838193

Promoter ID:

MM_KWN:44880

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, BoneMarrow_2Hour, Brain, Kidney, Liver, Lung, MEF_B4, MEF_B6

Transcripts:

NM_026864, UC009ANN.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	147,656,459 - 147,656,959 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1916145	AgrOrtholog
Ensembl Genes	ENSMUSG00000029641	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000031646	ENTREZGENE
	ENSMUST00000031646.8	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.50.300	UniProtKB/Swiss-Prot
InterPro	P-loop_NTPase	UniProtKB/Swiss-Prot
	Small_GTP-bd_dom	UniProtKB/Swiss-Prot
	Small_GTPase	UniProtKB/Swiss-Prot
KEGG Report	mmu:68895	UniProtKB/Swiss-Prot
MGD	MGI:1916145	ENTREZGENE
NCBI Gene	68895	ENTREZGENE
PANTHER	RAS-LIKE FAMILY MEMBER 11	UniProtKB/Swiss-Prot
	RAS-LIKE PROTEIN FAMILY MEMBER 11A	UniProtKB/Swiss-Prot
Pfam	Ras	UniProtKB/Swiss-Prot
PhenoGen	Rasl11a	PhenoGen
PRINTS	RASTRNSFRMNG	UniProtKB/Swiss-Prot
PROSITE	RAS	UniProtKB/Swiss-Prot
SMART	RAB	UniProtKB/Swiss-Prot
	RAS	UniProtKB/Swiss-Prot
	RHO	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot
UniProt	Q148R6	ENTREZGENE
	Q6IMB1	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q148R6	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD