Vmn1r67 (vomeronasal 1 receptor 67) - Rat Genome Database

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Pathways
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Gene: Vmn1r67 (vomeronasal 1 receptor 67) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn1r67
Name: vomeronasal 1 receptor 67
RGD ID: 1551113
MGI Page MGI
Description: Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Orthologous to human VN1R2 (vomeronasal 1 receptor 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: MGC175629; V1re; V1re10; vomernasal 1 receptor Vmn1r67; vomeronasal 1 receptor, E10
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39710,180,716 - 10,181,714 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl710,177,258 - 10,183,129 (+)EnsemblGRCm39 Ensembl
GRCm38710,446,789 - 10,447,787 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl710,443,331 - 10,449,202 (+)EnsemblGRCm38mm10GRCm38
MGSCv37711,032,138 - 11,033,136 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3679,321,704 - 9,322,621 (+)NCBIMGSCv36mm8
Celera77,563,436 - 7,564,434 (-)NCBICelera
Cytogenetic Map7A1NCBI
cM Map76.44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, etal., Nat Neurosci 2002 Feb;5(2):134-40.
Additional References at PubMed
PMID:12477932   PMID:19952141   PMID:20003482   PMID:20844586   PMID:21873635  


Genomics

Variants

.
Variants in Vmn1r67
31 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:24
Count of miRNA genes:24
Interacting mature miRNAs:24
Transcripts:ENSMUST00000055964
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse

Markers in Region
UniSTS:494244  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38710,446,789 - 10,447,787UniSTSGRCm38
MGSCv37711,032,138 - 11,033,136UniSTSGRCm37
Celera77,563,436 - 7,564,434UniSTS
Cytogenetic Map7A1UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000055964   ⟹   ENSMUSP00000060746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl710,180,716 - 10,183,129 (+)Ensembl
GRCm38.p6 Ensembl710,446,789 - 10,449,202 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226237   ⟹   ENSMUSP00000154237
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl710,177,258 - 10,183,129 (+)Ensembl
GRCm38.p6 Ensembl710,443,331 - 10,449,202 (+)Ensembl
RefSeq Acc Id: NM_134229   ⟹   NP_598990
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39710,180,716 - 10,181,714 (+)NCBI
GRCm38710,446,789 - 10,447,787 (+)ENTREZGENE
MGSCv37711,032,138 - 11,033,136 (+)RGD
Celera77,563,436 - 7,564,434 (-)RGD
cM Map7 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_598990 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI38175 (Get FASTA)   NCBI Sequence Viewer  
  AAI45743 (Get FASTA)   NCBI Sequence Viewer  
  AAL47914 (Get FASTA)   NCBI Sequence Viewer  
  EDL03622 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000060746
  ENSMUSP00000060746.5
  ENSMUSP00000154237.2
Reference Protein Sequences
RefSeq Acc Id: NP_598990   ⟸   NM_134229
- UniProtKB: A6H640 (UniProtKB/TrEMBL),   G5E8C1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000060746   ⟸   ENSMUST00000055964
RefSeq Acc Id: ENSMUSP00000154237   ⟸   ENSMUST00000226237
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G5E8C1-F1-model_v2 AlphaFold G5E8C1 1-305 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2159632 AgrOrtholog
Ensembl Genes ENSMUSG00000046716 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000055964 ENTREZGENE
  ENSMUST00000055964.8 UniProtKB/TrEMBL
  ENSMUST00000226237.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Vmron_rcpt_1 UniProtKB/TrEMBL
KEGG Report mmu:171263 UniProtKB/TrEMBL
MGD MGI:2159632 ENTREZGENE
NCBI Gene 171263 ENTREZGENE
PANTHER PTHR24062 UniProtKB/TrEMBL
  VOMERONASAL TYPE-1 RECEPTOR UniProtKB/TrEMBL
Pfam V1R UniProtKB/TrEMBL
PhenoGen Vmn1r67 PhenoGen
PRINTS VOMERONASL1R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2I3BQL0_MOUSE UniProtKB/TrEMBL
  A6H640 ENTREZGENE, UniProtKB/TrEMBL
  G5E8C1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Vmn1r67  vomeronasal 1 receptor 67  V1re10  vomeronasal 1 receptor, E10  Symbol and/or name change 5135510 APPROVED