Klf5 (Kruppel-like factor 5) - Rat Genome Database

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Gene: Klf5 (Kruppel-like factor 5) Mus musculus
Analyze
Symbol: Klf5
Name: Kruppel-like factor 5
RGD ID: 1551083
MGI Page MGI
Description: Enables DNA-binding transcription factor activity, RNA polymerase II-specific; MRF binding activity; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; regulation of transcription, DNA-templated; and skeletal muscle tissue regeneration. Located in nucleus. Part of transcription regulator complex. Is expressed in several structures, including early conceptus; genitourinary system; gut; respiratory system; and sensory organ. Orthologous to human KLF5 (Kruppel like factor 5).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 4930520J07Rik; basic transcription element binding protein 2; basic transcription element-binding protein 2; BTE-binding protein 2; Bteb2; CKL; CKLF; IK; IKLF; intestinal-enriched krueppel-like factor; Krueppel-like factor 5; transcription factor BTEB2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm2203   Gm6007  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391499,536,127 - 99,550,848 (+)NCBIGRCm39mm39
GRCm39 Ensembl1499,536,127 - 99,552,472 (+)Ensembl
GRCm381499,298,691 - 99,313,412 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1499,298,691 - 99,315,036 (+)EnsemblGRCm38mm10GRCm38
MGSCv371499,697,910 - 99,712,631 (+)NCBIGRCm37mm9NCBIm37
MGSCv361498,181,825 - 98,196,546 (+)NCBImm8
Celera1497,974,632 - 97,989,357 (+)NCBICelera
Cytogenetic Map14E2.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(+)-schisandrin B  (ISO)
(2,4,5-trichlorophenoxy)acetic acid  (EXP)
1,2,4-trimethylbenzene  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3-methylcholanthrene  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (ISO)
ammonium chloride  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP)
antimonite  (ISO)
antimycin A  (ISO)
arachidonic acid  (ISO)
aristolochic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (ISO)
atrazine  (ISO)
azathioprine  (ISO)
baicalein  (EXP)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol A diglycidyl ether  (ISO)
bisphenol F  (EXP)
boric acid  (EXP)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP,ISO)
chloroprene  (ISO)
choline  (EXP)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (EXP,ISO)
cucurbitacin B  (EXP)
cucurbitacin I  (EXP)
cumene  (EXP)
Cuprizon  (ISO)
Curcumol  (EXP,ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
etoposide  (ISO)
flavonoids  (ISO)
fluoranthene  (EXP)
folic acid  (EXP)
furan  (ISO)
genistein  (EXP)
gentamycin  (ISO)
geraniol  (ISO)
hydrogen peroxide  (ISO)
kojic acid  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
manganese(II) chloride  (EXP,ISO)
mercury dibromide  (ISO)
methamphetamine  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
N-nitrosodimethylamine  (ISO)
nickel dichloride  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
PCB138  (ISO)
perfluorooctanoic acid  (ISO)
phenylmercury acetate  (ISO)
phosgene  (EXP)
pioglitazone  (ISO)
progesterone  (ISO)
Ptaquiloside  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
rifampicin  (ISO)
rotenone  (ISO)
SB 203580  (EXP,ISO)
SB 431542  (ISO)
SCH 23390  (ISO)
silibinin  (EXP)
silver atom  (ISO)
silver(0)  (ISO)
sirolimus  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
Soman  (ISO)
sulindac  (ISO)
sunitinib  (ISO)
tacrolimus hydrate  (ISO)
tamibarotene  (ISO)
tebufenpyrad  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
triacsin C  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
tunicamycin  (ISO)
undecane  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal aorta wall morphology  (IAGP)
abnormal cardiovascular system physiology  (IAGP)
abnormal conjunctival epithelium morphology  (IAGP)
abnormal cornea morphology  (IAGP)
abnormal corneal epithelium morphology  (IAGP)
abnormal corneal stroma morphology  (IAGP)
abnormal extraocular muscle morphology  (IAGP)
abnormal eyelid aperture  (IAGP)
abnormal eyelid morphology  (IAGP)
abnormal heart left ventricle morphology  (IAGP)
abnormal inner cell mass morphology  (IAGP)
abnormal intestinal mucosa morphology  (IAGP)
abnormal iris morphology  (IAGP)
abnormal lacrimal gland morphology  (IAGP)
abnormal large intestine crypts of Lieberkuhn morphology  (IAGP)
abnormal lens epithelium morphology  (IAGP)
abnormal lens morphology  (IAGP)
abnormal lung development  (IAGP)
abnormal lung saccule morphology  (IAGP)
abnormal Meibomian gland acinus morphology  (IAGP)
abnormal Meibomian gland development  (IAGP)
abnormal Meibomian gland physiology  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal myocardial fiber physiology  (IAGP)
abnormal ocular surface morphology  (IAGP)
abnormal palpebral conjunctiva morphology  (IAGP)
abnormal prostate gland anterior lobe morphology  (IAGP)
abnormal prostate gland dorsolateral lobe morphology  (IAGP)
abnormal prostate gland physiology  (IAGP)
abnormal pulmonary alveolus morphology  (IAGP)
abnormal response of heart to induced stress  (IAGP)
abnormal response to infection  (IAGP)
abnormal small intestinal villus morphology  (IAGP)
abnormal surfactant secretion  (IAGP)
abnormal trophectoderm morphology  (IAGP)
abnormal type I pneumocyte morphology  (IAGP)
abnormal type II pneumocyte morphology  (IAGP)
abnormal vascular smooth muscle physiology  (IAGP)
abnormal vascular wound healing  (IAGP)
absent alveolar lamellar bodies  (IAGP)
absent blastocoele  (IAGP)
absent conjunctiva goblet cells  (IAGP)
anterior iris synechia  (IAGP)
cardiac fibrosis  (IAGP)
cardiac hypertrophy  (IAGP)
cardiac interstitial fibrosis  (IAGP)
corneal opacity  (IAGP)
decreased angiogenesis  (IAGP)
decreased corneal epithelium thickness  (IAGP)
decreased corneal stroma thickness  (IAGP)
decreased heart weight  (IAGP)
decreased inner cell mass proliferation  (IAGP)
decreased prostate gland weight  (IAGP)
decreased response of heart to induced stress  (IAGP)
decreased trophectoderm cell proliferation  (IAGP)
decreased type I pneumocyte number  (IAGP)
disorganized secondary lens fibers  (IAGP)
embryonic lethality at implantation, complete penetrance  (IAGP)
embryonic lethality before implantation, complete penetrance  (IAGP)
embryonic lethality, complete penetrance  (IAGP)
enlarged hair follicles  (IAGP)
enlarged sebaceous gland  (IAGP)
eyelid edema  (IAGP)
eyelids fail to open  (IAGP)
failure of blastocyst to hatch from the zona pellucida  (IAGP)
failure of embryo implantation  (IAGP)
increased cell proliferation  (IAGP)
increased cornea thickness  (IAGP)
increased corneal stroma thickness  (IAGP)
increased heart left ventricle size  (IAGP)
increased pulmonary respiratory rate  (IAGP)
increased sensitivity to induced morbidity/mortality  (IAGP)
increased sensitivity to xenobiotic induced morbidity/mortality  (IAGP)
increased susceptibility to induced colitis  (IEA)
increased wet-to-dry lung weight ratio  (IAGP)
lacrimal gland inflammation  (IAGP)
lacrimal gland necrosis  (IAGP)
microphthalmia  (IAGP)
narrow eye opening  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
posterior iris synechia  (IAGP)
prostate gland hyperplasia  (IAGP)
pulmonary alveolar edema  (IAGP)
pulmonary edema  (IAGP)
pulmonary vascular congestion  (IAGP)
respiratory distress  (IAGP)
small lens  (IAGP)
small pupils  (IAGP)
thick lung-associated mesenchyme  (IAGP)
weight loss  (IAGP)
References

Additional References at PubMed
PMID:9858544   PMID:9973612   PMID:10349636   PMID:10767086   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11134343   PMID:11152667   PMID:11472850   PMID:12101409   PMID:12477932  
PMID:12520002   PMID:14610273   PMID:14660441   PMID:15077182   PMID:15489334   PMID:15581624   PMID:15740636   PMID:15820306   PMID:16054042   PMID:16102021   PMID:16102754   PMID:16141072  
PMID:16141073   PMID:16230531   PMID:16500892   PMID:16912082   PMID:17178721   PMID:17283079   PMID:17395897   PMID:17508399   PMID:17576135   PMID:18054006   PMID:18264089   PMID:18287559  
PMID:18395082   PMID:18450752   PMID:18500350   PMID:18554416   PMID:18599506   PMID:18617520   PMID:18653541   PMID:18782761   PMID:18983969   PMID:19268913   PMID:19435907   PMID:20038803  
PMID:20059953   PMID:20298593   PMID:20362541   PMID:20378849   PMID:20412781   PMID:20439489   PMID:20639455   PMID:20719859   PMID:20875108   PMID:20980403   PMID:21056461   PMID:21078320  
PMID:21267068   PMID:21503901   PMID:21600198   PMID:21677750   PMID:21731673   PMID:21763241   PMID:21803035   PMID:21821915   PMID:21873635   PMID:21911492   PMID:22127252   PMID:22147266  
PMID:22219353   PMID:22233806   PMID:22307056   PMID:22675454   PMID:22696295   PMID:22988430   PMID:23024760   PMID:23112162   PMID:23266329   PMID:23293024   PMID:23552075   PMID:23755247  
PMID:23780512   PMID:23790631   PMID:23892456   PMID:24126055   PMID:24440658   PMID:24475213   PMID:24496616   PMID:24626089   PMID:24770696   PMID:24859004   PMID:25069574   PMID:25100655  
PMID:25197166   PMID:25359725   PMID:25425963   PMID:25504335   PMID:25896510   PMID:25896712   PMID:26077572   PMID:26206133   PMID:26212907   PMID:26226504   PMID:26288816   PMID:26372456  
PMID:26483416   PMID:26574507   PMID:26667042   PMID:26681925   PMID:26731538   PMID:26771354   PMID:27207790   PMID:27334059   PMID:27743478   PMID:27856242   PMID:28115390   PMID:28394333  
PMID:28434617   PMID:28711598   PMID:28864500   PMID:28870993   PMID:28942923   PMID:29074464   PMID:29248441   PMID:29472293   PMID:29523685   PMID:29739838   PMID:29896983   PMID:30101462  
PMID:30452437   PMID:30551500   PMID:30905739   PMID:30982802   PMID:31029826   PMID:31049798   PMID:31077711   PMID:31116584   PMID:31320324   PMID:31451021   PMID:31624151   PMID:31778829  
PMID:32081850   PMID:32098917   PMID:32208992   PMID:32515350   PMID:32817651   PMID:32913205   PMID:33078455   PMID:33164644   PMID:33232688   PMID:33539225   PMID:33636159   PMID:34426497  
PMID:34551684  


Genomics

Comparative Map Data
Klf5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391499,536,127 - 99,550,848 (+)NCBIGRCm39mm39
GRCm39 Ensembl1499,536,127 - 99,552,472 (+)Ensembl
GRCm381499,298,691 - 99,313,412 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1499,298,691 - 99,315,036 (+)EnsemblGRCm38mm10GRCm38
MGSCv371499,697,910 - 99,712,631 (+)NCBIGRCm37mm9NCBIm37
MGSCv361498,181,825 - 98,196,546 (+)NCBImm8
Celera1497,974,632 - 97,989,357 (+)NCBICelera
Cytogenetic Map14E2.2NCBI
KLF5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1373,054,976 - 73,077,541 (+)EnsemblGRCh38hg38GRCh38
GRCh381373,054,976 - 73,077,538 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371373,629,114 - 73,651,676 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361372,531,143 - 72,549,677 (+)NCBINCBI36hg18NCBI36
Build 341372,531,142 - 72,549,677NCBI
Celera1354,531,627 - 54,550,162 (+)NCBI
Cytogenetic Map13q22.1NCBI
HuRef1354,330,388 - 54,348,922 (+)NCBIHuRef
CHM1_11373,600,752 - 73,619,289 (+)NCBICHM1_1
Klf5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21576,060,320 - 76,079,445 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1576,064,258 - 76,079,445 (+)Ensembl
Rnor_6.01583,703,796 - 83,722,921 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1583,703,791 - 83,722,921 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01587,212,719 - 87,231,850 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41583,103,177 - 83,118,363 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11583,121,895 - 83,132,620 (+)NCBI
Celera1575,305,416 - 75,320,302 (+)NCBICelera
Cytogenetic Map15q21NCBI
Klf5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540433,644,077 - 33,658,094 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540433,642,604 - 33,665,445 (-)NCBIChiLan1.0ChiLan1.0
KLF5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11373,062,147 - 73,084,730 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01354,287,578 - 54,310,216 (+)NCBIMhudiblu_PPA_v0panPan3
KLF5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12227,163,179 - 27,185,241 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2227,162,397 - 27,200,871 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2227,019,480 - 27,041,542 (+)NCBI
ROS_Cfam_1.02227,495,564 - 27,517,646 (+)NCBI
ROS_Cfam_1.0 Ensembl2227,495,481 - 27,517,642 (+)Ensembl
UMICH_Zoey_3.12227,157,251 - 27,179,316 (+)NCBI
UNSW_CanFamBas_1.02227,200,989 - 27,218,613 (+)NCBI
UU_Cfam_GSD_1.02227,268,194 - 27,290,288 (+)NCBI
Klf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945132,390,448 - 132,412,071 (-)NCBI
SpeTri2.0NW_0049365117,806,714 - 7,824,833 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLF5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1145,369,797 - 45,388,314 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11145,370,009 - 45,386,673 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21149,866,834 - 49,870,127 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap11q13-q14NCBI
KLF5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1352,188,139 - 52,210,882 (+)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660468,300,637 - 8,319,192 (+)NCBIVero_WHO_p1.0
Klf5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475127,488,434 - 27,509,871 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
Klf5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map14E2.2UniSTS
cM Map14 UniSTS
UniSTS:237237  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381499,301,943 - 99,302,112UniSTSGRCm38
MGSCv371499,701,162 - 99,701,331UniSTSGRCm37
Celera1497,977,884 - 97,978,053UniSTS
Cytogenetic Map14E2.2UniSTS
D14Jor1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381499,305,526 - 99,306,106UniSTSGRCm38
MGSCv371499,704,745 - 99,705,325UniSTSGRCm37
Celera1497,981,467 - 97,982,047UniSTS
Cytogenetic Map14E2.2UniSTS
cM Map1448.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420837405121032392Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1457942183101622037Mouse
14747006Mancz12_mmandible centroid size 12 (mouse)1469834541103834541Mouse
10054475Ossc3_mosteosarcoma susceptibility 3 (mouse)Not determined1470626332104626490Mouse
1300551Lprm3_mlymphoproliferation modifier 3 (mouse)Not determined1470983788104983908Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474114860108114948Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474157540108157657Mouse
14928314Manh77_mmandible shape 77 (mouse)1476530354110530354Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1476836260110836351Mouse
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1482924828116925025Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined84896632118896632Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir448mmu-miR-448-5pMirecordsexternal_info{unchanged}NA20719859

Predicted Target Of
Summary Value
Count of predictions:169
Count of miRNA genes:166
Interacting mature miRNAs:169
Transcripts:ENSMUST00000005279
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000005279   ⟹   ENSMUSP00000005279
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1499,536,127 - 99,552,472 (+)Ensembl
GRCm38.p6 Ensembl1499,298,691 - 99,315,036 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226784   ⟹   ENSMUSP00000154786
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1499,536,590 - 99,542,762 (+)Ensembl
GRCm38.p6 Ensembl1499,299,154 - 99,305,326 (+)Ensembl
RefSeq Acc Id: NM_009769   ⟹   NP_033899
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391499,536,127 - 99,550,848 (+)NCBI
GRCm381499,298,691 - 99,313,412 (+)ENTREZGENE
MGSCv371499,697,910 - 99,712,631 (+)RGD
Celera1497,974,632 - 97,989,357 (+)RGD
cM Map14 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033899   ⟸   NM_009769
- UniProtKB: Q9Z0Z7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000154786   ⟸   ENSMUST00000226784
RefSeq Acc Id: ENSMUSP00000005279   ⟸   ENSMUST00000005279
Protein Domains
C2H2-type

Promoters
RGD ID:8683112
Promoter ID:EPDNEW_M19587
Type:multiple initiation site
Name:Klf5_1
Description:Mus musculus Kruppel-like factor 5 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381499,298,688 - 99,298,748EPDNEW
RGD ID:6825105
Promoter ID:MM_KWN:17625
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_2Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:NM_009769,   UC007UVF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361499,697,586 - 99,698,342 (+)MPROMDB
RGD ID:6847110
Promoter ID:MM_ACW:16896
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   ES_Cell
Transcripts:KLF5.ESEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361499,700,714 - 99,701,214 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1338056 AgrOrtholog
Ensembl Genes ENSMUSG00000005148 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000005279 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000154786 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000005279 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000226784 UniProtKB/TrEMBL
InterPro KLF5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12224 UniProtKB/Swiss-Prot
MGD MGI:1338056 ENTREZGENE
NCBI Gene 12224 ENTREZGENE
PANTHER PTHR23235:SF82 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PhenoGen Klf5 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt KLF5_MOUSE UniProtKB/Swiss-Prot
  Q923C0_MOUSE UniProtKB/TrEMBL
  Q9Z0Z7 ENTREZGENE
UniProt Secondary Q9JMI2 UniProtKB/Swiss-Prot