Lingo2 (leucine rich repeat and Ig domain containing 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Lingo2 (leucine rich repeat and Ig domain containing 2) Mus musculus
Analyze
Symbol: Lingo2
Name: leucine rich repeat and Ig domain containing 2
RGD ID: 1551074
MGI Page MGI
Description: Acts upstream of or within positive regulation of synapse assembly. Predicted to be located in glutamatergic synapse and synaptic membrane. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including central nervous system and nose. Orthologous to human LINGO2 (leucine rich repeat and Ig domain containing 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: B230217C06Rik; LE; Lern3; leucine rich repeat neuronal 6C; leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2; leucine-rich repeat neuronal protein 6C; Lr; Lrrn6c
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39435,696,778 - 36,951,929 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl435,706,647 - 36,951,747 (-)EnsemblGRCm39 Ensembl
GRCm38435,696,778 - 36,951,744 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl435,706,647 - 36,951,747 (-)EnsemblGRCm38mm10GRCm38
MGSCv37435,653,896 - 36,898,777 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36435,896,291 - 36,034,083 (-)NCBIMGSCv36mm8
Celera435,399,009 - 36,648,653 (-)NCBICelera
Cytogenetic Map4A5NCBI
cM Map417.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:17145500   PMID:18297755   PMID:18848646   PMID:21267068   PMID:21873635  
PMID:24427155   PMID:24613359   PMID:25826454   PMID:31562318   PMID:38187761   PMID:38355793   PMID:38380802   PMID:39443477  


Genomics

Comparative Map Data
Lingo2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39435,696,778 - 36,951,929 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl435,706,647 - 36,951,747 (-)EnsemblGRCm39 Ensembl
GRCm38435,696,778 - 36,951,744 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl435,706,647 - 36,951,747 (-)EnsemblGRCm38mm10GRCm38
MGSCv37435,653,896 - 36,898,777 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36435,896,291 - 36,034,083 (-)NCBIMGSCv36mm8
Celera435,399,009 - 36,648,653 (-)NCBICelera
Cytogenetic Map4A5NCBI
cM Map417.74NCBI
LINGO2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38927,937,617 - 29,213,601 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl927,937,617 - 29,213,601 (-)EnsemblGRCh38hg38GRCh38
GRCh37927,937,615 - 29,213,599 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36927,938,528 - 28,709,303 (-)NCBINCBI36Build 36hg18NCBI36
Celera927,876,621 - 28,649,863 (-)NCBICelera
Cytogenetic Map9p21.2-p21.1NCBI
HuRef927,900,694 - 29,165,921 (-)NCBIHuRef
CHM1_1927,947,856 - 29,212,826 (-)NCBICHM1_1
T2T-CHM13v2.0927,948,210 - 29,231,596 (-)NCBIT2T-CHM13v2.0
Lingo2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8555,166,250 - 56,488,672 (-)NCBIGRCr8
mRatBN7.2550,370,744 - 51,687,252 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl550,367,101 - 50,516,956 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx552,565,927 - 52,708,396 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0554,163,406 - 54,305,883 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0554,065,306 - 54,207,789 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0551,466,367 - 51,638,161 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0556,027,971 - 56,198,552 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4552,476,741 - 52,590,042 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera549,086,900 - 49,231,177 (-)NCBICelera
Cytogenetic Map5q21-q22NCBI
Lingo2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554726,968,576 - 6,970,396 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554725,790,522 - 6,971,152 (+)NCBIChiLan1.0ChiLan1.0
LINGO2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21195,382,085 - 96,628,142 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1995,388,029 - 96,634,088 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0927,760,276 - 29,008,800 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1928,366,227 - 29,779,879 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl928,377,472 - 28,379,292 (-)Ensemblpanpan1.1panPan2
LINGO2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11145,997,900 - 47,115,857 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1145,998,249 - 46,000,069 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1144,665,908 - 45,803,522 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01146,943,920 - 48,068,400 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1146,944,491 - 46,946,845 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11145,599,200 - 46,722,220 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01145,496,756 - 46,618,731 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01146,237,174 - 47,354,240 (-)NCBIUU_Cfam_GSD_1.0
Lingo2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947160,911,991 - 161,400,764 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366111,747,626 - 1,749,446 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366111,267,679 - 1,434,908 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LINGO2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1038,026,962 - 38,028,782 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11036,741,209 - 38,031,139 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Lingo2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473632,186,995 - 32,203,250 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473632,177,085 - 33,454,296 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Lingo2
68481 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1550
Count of miRNA genes:546
Interacting mature miRNAs:636
Transcripts:ENSMUST00000065092, ENSMUST00000065173, ENSMUST00000098151, ENSMUST00000108122, ENSMUST00000108124, ENSMUST00000124999, ENSMUST00000125128, ENSMUST00000127372, ENSMUST00000144170, ENSMUST00000145615, ENSMUST00000164772
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301203Alcp8_malcohol preference locus 8 (mouse)Not determined41739516051395290Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
10401115Pgia35_mproteoglycan induced arthritis 35 (mouse)Not determined41256237746562509Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
4141555Nbwa2_mNZB and NZW autoimmunity 2 (mouse)Not determined41789251551892635Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
12880405Jcdq1_mjoint cartilage degeneration QTL 1 (mouse)41256237746562509Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
1301697Sluc18_msusceptibility to lung cancer 18 (mouse)Not determined42237344856373612Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
1300977Mopkd1_mmodifier of polycystic kidney disease progression 1 (mouse)Not determined43655083970550967Mouse
25440481Moaq1_mmodifier of alien QTL 1 (mouse)41950000046000000Mouse
1301237Alcp7_malcohol preference locus 7 (mouse)Not determined41739516051395290Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
1302075Bdln6_mbody length 6 (mouse)Not determined42237344856373612Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
4142290Ssrq9_mstress response QTL 9 (mouse)Not determined3439516046332776Mouse
1301437Scon1_msucrose consumption 1 (mouse)Not determined42237344856373612Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1300769Pcyts2_mplasmacytoma susceptibility 2 (mouse)Not determined42211194456112145Mouse
1301792Hdlq10_mHDL QTL 10 (mouse)Not determined43585970769859853Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
1302058Hrtfm3_mheart failure modifier 3 (mouse)Not determined42211194456112145Mouse
1302184Aaom1_mautoimmune aoritis in MRL mice 1 (mouse)Not determined42432229946332776Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse

Markers in Region
22.MMHAP53FRH7.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38436,528,329 - 36,528,411UniSTSGRCm38
MGSCv37436,475,362 - 36,475,444UniSTSGRCm37
Celera436,225,315 - 36,225,397UniSTS
Cytogenetic Map4A5UniSTS
Whitehead_YAC4 UniSTS
MHAa81g8.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38436,431,674 - 36,431,860UniSTSGRCm38
MGSCv37436,378,707 - 36,378,893UniSTSGRCm37
Celera436,128,249 - 36,128,435UniSTS
Cytogenetic Map4A5UniSTS
Whitehead_YAC4 UniSTS
D4Mit194  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38436,819,216 - 36,819,361UniSTSGRCm38
MGSCv37436,766,249 - 36,766,394UniSTSGRCm37
Celera436,516,289 - 36,516,430UniSTS
Cytogenetic Map4A5UniSTS
cM Map412.1UniSTS
Whitehead Genetic416.4UniSTS
Whitehead_YAC4 UniSTS
UniSTS:234895  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38435,709,196 - 35,709,399UniSTSGRCm38
MGSCv37435,656,445 - 35,656,648UniSTSGRCm37
Celera435,401,558 - 35,401,761UniSTS
Cytogenetic Map4A5UniSTS
Lingo2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38435,709,220 - 35,709,855UniSTSGRCm38
MGSCv37435,656,469 - 35,657,104UniSTSGRCm37
Celera435,401,582 - 35,402,217UniSTS
Cytogenetic Map4A5UniSTS
cM Map4 UniSTS
BB396479  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38435,707,453 - 35,707,588UniSTSGRCm38
MGSCv37435,654,702 - 35,654,837UniSTSGRCm37
Celera435,399,815 - 35,399,950UniSTS
Cytogenetic Map4A5UniSTS
Whitehead/MRC_RH4589.7UniSTS
Lingo2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38435,708,959 - 35,709,735UniSTSGRCm38
MGSCv37435,656,208 - 35,656,984UniSTSGRCm37
Celera435,401,321 - 35,402,097UniSTS
Cytogenetic Map4A5UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001165999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001166000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001166001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK035778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL772194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL831712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL833783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL837522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC090619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC137866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX465188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY651810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LXEJ02006029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LXEJ02006533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000065173   ⟹   ENSMUSP00000069772
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl435,707,406 - 35,845,204 (-)Ensembl
GRCm38.p6 Ensembl435,707,406 - 35,845,204 (-)Ensembl
Ensembl Acc Id: ENSMUST00000098151   ⟹   ENSMUSP00000095754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl435,707,406 - 36,136,463 (-)Ensembl
GRCm38.p6 Ensembl435,707,406 - 36,136,463 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108122   ⟹   ENSMUSP00000103757
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl435,707,406 - 36,951,223 (-)Ensembl
GRCm38.p6 Ensembl435,707,406 - 36,951,223 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108124   ⟹   ENSMUSP00000103759
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl435,707,843 - 36,056,726 (-)Ensembl
GRCm38.p6 Ensembl435,707,843 - 36,056,726 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl436,056,724 - 36,950,486 (-)Ensembl
GRCm38.p6 Ensembl436,056,724 - 36,950,486 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125128
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl436,951,100 - 36,951,747 (-)Ensembl
GRCm38.p6 Ensembl436,951,100 - 36,951,747 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127372
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl436,718,557 - 36,950,467 (-)Ensembl
GRCm38.p6 Ensembl436,718,557 - 36,950,467 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144170
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl436,718,802 - 36,950,489 (-)Ensembl
GRCm38.p6 Ensembl436,718,802 - 36,950,489 (-)Ensembl
Ensembl Acc Id: ENSMUST00000145615
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl436,715,820 - 36,951,744 (-)Ensembl
GRCm38.p6 Ensembl436,715,820 - 36,951,744 (-)Ensembl
Ensembl Acc Id: ENSMUST00000164772   ⟹   ENSMUSP00000130423
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl435,706,647 - 35,845,204 (-)Ensembl
GRCm38.p6 Ensembl435,706,647 - 35,845,204 (-)Ensembl
RefSeq Acc Id: NM_001165999   ⟹   NP_001159471
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,706,647 - 36,951,744 (-)NCBI
GRCm38435,706,647 - 36,951,744 (-)NCBI
MGSCv37435,653,896 - 36,898,777 (-)RGD
Celera435,399,009 - 36,648,653 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001166000   ⟹   NP_001159472
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,706,647 - 36,718,963 (-)NCBI
GRCm38435,706,647 - 36,718,963 (-)NCBI
MGSCv37435,653,896 - 36,898,777 (-)RGD
Celera435,399,009 - 36,648,653 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001166001   ⟹   NP_001159473
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,706,647 - 35,845,204 (-)NCBI
GRCm38435,706,647 - 35,845,204 (-)NCBI
MGSCv37435,653,896 - 36,898,777 (-)RGD
Celera435,399,009 - 36,648,653 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_175516   ⟹   NP_780725
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,706,647 - 35,845,204 (-)NCBI
GRCm38435,706,647 - 35,845,204 (-)NCBI
MGSCv37435,653,896 - 36,898,777 (-)RGD
Celera435,399,009 - 36,648,653 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006537903   ⟹   XP_006537966
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 35,784,668 (-)NCBI
GRCm38435,696,778 - 35,784,238 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006537904   ⟹   XP_006537967
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,950,901 (-)NCBI
GRCm38435,696,778 - 36,950,900 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250017   ⟹   XP_011248319
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,770 (-)NCBI
GRCm38435,696,778 - 36,951,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250018   ⟹   XP_011248320
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,718,939 (-)NCBI
GRCm38435,696,778 - 36,951,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250019   ⟹   XP_011248321
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,718,939 (-)NCBI
GRCm38435,696,778 - 36,951,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250020   ⟹   XP_011248322
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,950,901 (-)NCBI
GRCm38435,696,778 - 36,950,900 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250023   ⟹   XP_011248325
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,770 (-)NCBI
GRCm38435,696,778 - 36,951,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320198   ⟹   XP_017175687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,153 (-)NCBI
GRCm38435,696,778 - 36,951,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253527   ⟹   XP_030109387
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,718,939 (-)NCBI
GRCm38435,696,778 - 36,951,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253528   ⟹   XP_030109388
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,340,567 (-)NCBI
GRCm38435,696,778 - 36,340,570 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164097   ⟹   XP_036019990
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,849 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164098   ⟹   XP_036019991
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,770 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164099   ⟹   XP_036019992
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,718,939 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164100   ⟹   XP_036019993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,849 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164101   ⟹   XP_036019994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,718,939 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164102   ⟹   XP_036019995
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,718,939 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164103   ⟹   XP_036019996
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,718,939 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164104   ⟹   XP_036019997
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,770 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164105   ⟹   XP_036019998
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,950,901 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164106   ⟹   XP_036019999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,950,901 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164107   ⟹   XP_036020000
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,950,901 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164108   ⟹   XP_036020001
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,950,901 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004941891
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39435,696,778 - 36,951,929 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001159471 (Get FASTA)   NCBI Sequence Viewer  
  NP_001159472 (Get FASTA)   NCBI Sequence Viewer  
  NP_001159473 (Get FASTA)   NCBI Sequence Viewer  
  NP_780725 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537966 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537967 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248319 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248320 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248321 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248322 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248325 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175687 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109387 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109388 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019990 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019991 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019992 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019993 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019994 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019995 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019996 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019997 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019998 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019999 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020000 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020001 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH90619 (Get FASTA)   NCBI Sequence Viewer  
  AAI37867 (Get FASTA)   NCBI Sequence Viewer  
  AAI44986 (Get FASTA)   NCBI Sequence Viewer  
  AAI45693 (Get FASTA)   NCBI Sequence Viewer  
  BAC29183 (Get FASTA)   NCBI Sequence Viewer  
  BAC31706 (Get FASTA)   NCBI Sequence Viewer  
  BAC32442 (Get FASTA)   NCBI Sequence Viewer  
  BAE24739 (Get FASTA)   NCBI Sequence Viewer  
  EDL05453 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000069772
  ENSMUSP00000069772.3
  ENSMUSP00000095754
  ENSMUSP00000095754.3
  ENSMUSP00000103757
  ENSMUSP00000103757.2
  ENSMUSP00000103759.4
  ENSMUSP00000130423
  ENSMUSP00000130423.2
GenBank Protein Q3URE9 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_780725   ⟸   NM_175516
- Peptide Label: precursor
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001159471   ⟸   NM_001165999
- Peptide Label: precursor
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001159472   ⟸   NM_001166000
- Peptide Label: precursor
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001159473   ⟸   NM_001166001
- Peptide Label: precursor
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006537967   ⟸   XM_006537904
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006537966   ⟸   XM_006537903
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248319   ⟸   XM_011250017
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248320   ⟸   XM_011250018
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248325   ⟸   XM_011250023
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248321   ⟸   XM_011250019
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248322   ⟸   XM_011250020
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175687   ⟸   XM_017320198
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030109387   ⟸   XM_030253527
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030109388   ⟸   XM_030253528
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000130423   ⟸   ENSMUST00000164772
Ensembl Acc Id: ENSMUSP00000069772   ⟸   ENSMUST00000065173
Ensembl Acc Id: ENSMUSP00000103757   ⟸   ENSMUST00000108122
Ensembl Acc Id: ENSMUSP00000103759   ⟸   ENSMUST00000108124
Ensembl Acc Id: ENSMUSP00000095754   ⟸   ENSMUST00000098151
RefSeq Acc Id: XP_036019993   ⟸   XM_036164100
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019990   ⟸   XM_036164097
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019991   ⟸   XM_036164098
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019997   ⟸   XM_036164104
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036020000   ⟸   XM_036164107
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019999   ⟸   XM_036164106
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036020001   ⟸   XM_036164108
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019998   ⟸   XM_036164105
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019994   ⟸   XM_036164101
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019996   ⟸   XM_036164103
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019995   ⟸   XM_036164102
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019992   ⟸   XM_036164099
- Peptide Label: isoform X1
- UniProtKB: Q8BLC0 (UniProtKB/Swiss-Prot),   Q3URE9 (UniProtKB/Swiss-Prot),   Q8BZD4 (UniProtKB/Swiss-Prot),   B2RQD4 (UniProtKB/TrEMBL),   B7ZN36 (UniProtKB/TrEMBL)
Protein Domains
Ig-like   LRRCT   LRRNT

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3URE9-F1-model_v2 AlphaFold Q3URE9 1-606 view protein structure

Promoters
RGD ID:6883026
Promoter ID:EPDNEW_M4964
Type:single initiation site
Name:Lingo2_2
Description:Mus musculus leucine rich repeat and Ig domain containing 2 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4965  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38435,760,929 - 35,760,989EPDNEW
RGD ID:6883028
Promoter ID:EPDNEW_M4965
Type:initiation region
Name:Lingo2_1
Description:Mus musculus leucine rich repeat and Ig domain containing 2 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4964  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38436,951,732 - 36,951,792EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442298 AgrOrtholog
Ensembl Genes ENSMUSG00000045083 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000065173 ENTREZGENE
  ENSMUST00000065173.9 UniProtKB/Swiss-Prot
  ENSMUST00000098151 ENTREZGENE
  ENSMUST00000098151.9 UniProtKB/Swiss-Prot
  ENSMUST00000108122 ENTREZGENE
  ENSMUST00000108122.8 UniProtKB/Swiss-Prot
  ENSMUST00000108124.4 UniProtKB/Swiss-Prot
  ENSMUST00000164772 ENTREZGENE
  ENSMUST00000164772.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
  3.80.10.10 UniProtKB/Swiss-Prot
InterPro Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_I-set UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_sub2 UniProtKB/Swiss-Prot
  Leu-rich_rpt UniProtKB/Swiss-Prot
  Leu-rich_rpt_typical-subtyp UniProtKB/Swiss-Prot
  LRR_dom_sf UniProtKB/Swiss-Prot
  LRR_TM_domain-containing UniProtKB/Swiss-Prot
  LRRNT UniProtKB/Swiss-Prot
KEGG Report mmu:242384 UniProtKB/Swiss-Prot
MGD MGI:2442298 ENTREZGENE
NCBI Gene 242384 ENTREZGENE
PANTHER ANTIGEN BSP, PUTATIVE-RELATED UniProtKB/Swiss-Prot
  LEUCINE RICH REPEAT AND IG DOMAIN CONTAINING 2 UniProtKB/Swiss-Prot
Pfam I-set UniProtKB/Swiss-Prot
  LRR_8 UniProtKB/Swiss-Prot
PhenoGen Lingo2 PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot
  LRR UniProtKB/Swiss-Prot
SMART IGc2 UniProtKB/Swiss-Prot
  LRR_TYP UniProtKB/Swiss-Prot
  LRRNT UniProtKB/Swiss-Prot
  SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP L domain-like UniProtKB/Swiss-Prot
  SSF48726 UniProtKB/Swiss-Prot
UniProt B2RQD4 ENTREZGENE, UniProtKB/TrEMBL
  B7ZN36 ENTREZGENE, UniProtKB/TrEMBL
  LIGO2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BLC0 ENTREZGENE
  Q8BRM5_MOUSE UniProtKB/TrEMBL
  Q8BZD4 ENTREZGENE
UniProt Secondary Q8BLC0 UniProtKB/Swiss-Prot
  Q8BZD4 UniProtKB/Swiss-Prot