Hs3st3b1 (heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1) - Rat Genome Database

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Gene: Hs3st3b1 (heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1) Mus musculus
Analyze
Symbol: Hs3st3b1
Name: heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
RGD ID: 1550701
MGI Page MGI
Description: Enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity. Involved in branching involved in ureteric bud morphogenesis and heparan sulfate proteoglycan biosynthetic process. Located in plasma membrane. Is expressed in several structures, including alimentary system; brain; genitourinary system; limb; and respiratory system. Orthologous to human HS3ST3B1 (heparan sulfate-glucosamine 3-sulfotransferase 3B1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 3-OST-; 3-OST-3B; 3Ost; 3OST3; 3Ost3b; 3OST3B1; AU041882; AW536289; D-glycosaminyl 3-O-sulfotransferase-3B; expressed sequence AU041882; heparan sulfate 3-O-sulfotransferase 3B1; heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1; heparan sulfate glucosamine 3-O-sulfotransferase 3B1; HS3ST3; Hs3st3b; m3-OST-; m3-OST-3B
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,775,519 - 63,813,110 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1163,776,618 - 63,813,116 (-)EnsemblGRCm39 Ensembl
GRCm381163,884,693 - 63,922,284 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,885,792 - 63,922,290 (-)EnsemblGRCm38mm10GRCm38
MGSCv371163,698,195 - 63,735,786 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361163,700,888 - 63,738,479 (-)NCBIMGSCv36mm8
Celera1170,821,905 - 70,859,415 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1139.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
azoxystrobin  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
diazinon  (ISO)
diclofenac  (EXP)
dicrotophos  (ISO)
dimethylarsinic acid  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
fenthion  (EXP)
formaldehyde  (ISO)
fulvestrant  (ISO)
genistein  (EXP)
gentamycin  (ISO)
glycidol  (ISO)
glyphosate  (ISO)
imidacloprid  (ISO)
inulin  (EXP)
irinotecan  (ISO)
lead(0)  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
mercury dibromide  (ISO)
methapyrilene  (ISO)
methylarsonic acid  (EXP)
methylmercury chloride  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
permethrin  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
progesterone  (ISO)
rac-lactic acid  (ISO)
resorcinol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sotorasib  (ISO)
tetrachloromethane  (EXP)
thiabendazole  (ISO)
titanium dioxide  (EXP)
trametinib  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
trovafloxacin  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9988767   PMID:10349636   PMID:10520990   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15944372  
PMID:16141072   PMID:16141073   PMID:16602821   PMID:18287559   PMID:20510229   PMID:21873635   PMID:24924191   PMID:26575945   PMID:27668656   PMID:28705898   PMID:30228991   PMID:32017326  
PMID:34321999   PMID:34653670   PMID:37414952  


Genomics

Comparative Map Data
Hs3st3b1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,775,519 - 63,813,110 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1163,776,618 - 63,813,116 (-)EnsemblGRCm39 Ensembl
GRCm381163,884,693 - 63,922,284 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,885,792 - 63,922,290 (-)EnsemblGRCm38mm10GRCm38
MGSCv371163,698,195 - 63,735,786 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361163,700,888 - 63,738,479 (-)NCBIMGSCv36mm8
Celera1170,821,905 - 70,859,415 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1139.47NCBI
HS3ST3B1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381714,301,081 - 14,349,404 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1714,301,081 - 14,349,404 (+)EnsemblGRCh38hg38GRCh38
GRCh371714,204,398 - 14,252,721 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361714,145,231 - 14,190,217 (+)NCBINCBI36Build 36hg18NCBI36
Build 341714,145,230 - 14,190,217NCBI
Celera1714,228,464 - 14,273,440 (+)NCBICelera
Cytogenetic Map17p12NCBI
HuRef1714,098,238 - 14,143,227 (+)NCBIHuRef
CHM1_11714,211,645 - 14,258,256 (+)NCBICHM1_1
T2T-CHM13v2.01714,207,195 - 14,255,584 (+)NCBIT2T-CHM13v2.0
Hs3st3b1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81049,060,693 - 49,093,185 (-)NCBIGRCr8
mRatBN7.21048,561,473 - 48,593,970 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1048,561,473 - 48,593,970 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1053,259,417 - 53,291,921 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01052,749,536 - 52,782,038 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01048,253,398 - 48,285,900 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01050,369,097 - 50,402,584 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1050,366,952 - 50,402,616 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01050,138,478 - 50,170,551 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41050,118,357 - 50,151,712 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11050,131,489 - 50,165,390 (-)NCBI
Celera1047,794,540 - 47,827,011 (-)NCBICelera
Cytogenetic Map10q23NCBI
HS3ST3B1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21959,401,639 - 59,456,860 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11764,208,025 - 64,256,456 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01737,302,663 - 37,351,099 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11741,949,282 - 41,996,479 (-)NCBIpanpan1.1PanPan1.1panPan2
LOC489516
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1538,023,858 - 38,066,548 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl538,023,684 - 38,065,487 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha538,171,554 - 38,213,835 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0538,132,337 - 38,176,171 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl538,131,823 - 38,175,110 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1538,109,125 - 38,151,407 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0538,052,765 - 38,095,041 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0538,241,454 - 38,283,822 (+)NCBIUU_Cfam_GSD_1.0
Hs3st3b1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560256,976,377 - 57,017,890 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936724946,218 - 987,806 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936724946,329 - 987,798 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HS3ST3B1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1258,126,304 - 58,168,404 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11258,126,477 - 58,168,407 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21261,093,288 - 61,145,842 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103242418
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11613,604,377 - 13,653,247 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1613,604,297 - 13,653,242 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660597,582,118 - 7,630,713 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hs3st3b1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248772,332,972 - 2,376,277 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248772,335,258 - 2,376,018 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Hs3st3b1
1282 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1453
Count of miRNA genes:671
Interacting mature miRNAs:835
Transcripts:ENSMUST00000094103
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115406567067078411Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115408094165103841Mouse
4141642Ltxs2_mlethal factor toxin susceptibility 2 (mouse)Not determined116304211368500330Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115925661769482699Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse

Markers in Region
AW536289  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,886,100 - 63,886,236UniSTSGRCm38
MGSCv371163,699,602 - 63,699,738UniSTSGRCm37
Celera1170,823,312 - 70,823,448UniSTS
Cytogenetic Map11B3UniSTS
cM Map1133.0UniSTS
Whitehead/MRC_RH11830.64UniSTS
AU041882  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,884,213 - 63,884,308UniSTSGRCm38
MGSCv371163,697,715 - 63,697,810UniSTSGRCm37
Celera1170,821,425 - 70,821,520UniSTS
Cytogenetic Map11B3UniSTS
cM Map1133.0UniSTS
Whitehead/MRC_RH11830.9UniSTS
UniSTS:236598  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,884,212 - 63,884,446UniSTSGRCm38
MGSCv371163,697,714 - 63,697,948UniSTSGRCm37
Celera1170,821,424 - 70,821,658UniSTS
Cytogenetic Map11B3UniSTS
cM Map1133.0UniSTS
Hs3st3b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,921,458 - 63,921,687UniSTSGRCm38
Celera1170,858,589 - 70,858,818UniSTS
Cytogenetic Map11B3UniSTS
cM Map1139.47UniSTS
Hs3st3b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381164,520,618 - 64,520,788UniSTSGRCm38
GRCm381163,889,155 - 63,889,325UniSTSGRCm38
Celera1170,826,367 - 70,826,537UniSTS
Celera1171,454,975 - 71,455,145UniSTS
Cytogenetic Map11B3UniSTS
cM Map1133.0UniSTS
cM Map1133.0UniSTS
Hs3st3b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B3UniSTS
cM Map1133.0UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000094103   ⟹   ENSMUSP00000091647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1163,776,618 - 63,813,116 (-)Ensembl
GRCm38.p6 Ensembl1163,885,792 - 63,922,290 (-)Ensembl
RefSeq Acc Id: NM_018805   ⟹   NP_061275
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,775,519 - 63,813,110 (-)NCBI
GRCm381163,884,693 - 63,922,284 (-)ENTREZGENE
MGSCv371163,698,195 - 63,735,786 (-)RGD
Celera1170,821,905 - 70,859,415 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030246160   ⟹   XP_030102020
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,776,616 - 63,813,104 (-)NCBI
GRCm381163,885,790 - 63,922,278 (-)NCBI
Sequence:
RefSeq Acc Id: NP_061275   ⟸   NM_018805
- UniProtKB: Q5NCR0 (UniProtKB/Swiss-Prot),   Q9QZS6 (UniProtKB/Swiss-Prot),   Q3TA92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030102020   ⟸   XM_030246160
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000091647   ⟸   ENSMUST00000094103
Protein Domains
Sulfotransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QZS6-F1-model_v2 AlphaFold Q9QZS6 1-390 view protein structure

Promoters
RGD ID:6821083
Promoter ID:MM_KWN:7871
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000017960
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361163,735,544 - 63,736,044 (-)MPROMDB
RGD ID:8675024
Promoter ID:EPDNEW_M15543
Type:multiple initiation site
Name:Hs3st3b1_1
Description:Mus musculus heparan sulfate 3-O-sulfotransferase 3B1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381163,922,278 - 63,922,338EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1333853 AgrOrtholog
Ensembl Genes ENSMUSG00000070407 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000094103 ENTREZGENE
  ENSMUST00000094103.4 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro NST/OST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sulfotransferase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:54710 UniProtKB/Swiss-Prot
MGD MGI:1333853 ENTREZGENE
NCBI Gene 54710 ENTREZGENE
PANTHER HEPARAN SULFATE GLUCOSAMINE 3-O-SULFOTRANSFERASE 3B1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10605 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Sulfotransfer_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hs3st3b1 PhenoGen
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt HS3SB_MOUSE UniProtKB/Swiss-Prot
  Q3TA92 ENTREZGENE, UniProtKB/TrEMBL
  Q5NCR0 ENTREZGENE
  Q9QZS6 ENTREZGENE
UniProt Secondary Q5NCR0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-09 Hs3st3b1  heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1  AU041882  expressed sequence AU041882  Data merged from RGD:1611088 737654 PROVISIONAL