Eogt (EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase) - Rat Genome Database
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Gene: Eogt (EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase) Mus musculus
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Symbol: Eogt
Name: EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
RGD ID: 1550671
MGI Page MGI
Description: Is expressed in several structures, including blood vessel; central nervous system; limb; lung; and tail unsegmented mesenchyme. Human ortholog(s) of this gene implicated in Adams-Oliver syndrome. Orthologous to human EOGT (EGF domain specific O-linked N-acetylglucosamine transferase); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene; ethanol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A130022J15Rik; Aer61; AI447490; AW214473; AW259391; EGF domain-specific O-linked N-acetylglucosamine transferase; extracellular O-linked N-acetylglucosamine transferase; hypothetical protein LOC101351; uncharacterized glycosyltransferase AER61
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm2439  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39697,086,977 - 97,128,445 (-)NCBIGRCm39mm39
GRCm39 Ensembl697,086,985 - 97,126,143 (-)Ensembl
GRCm38697,110,016 - 97,151,484 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl697,110,024 - 97,149,182 (-)EnsemblGRCm38mm10GRCm38
MGSCv37697,060,938 - 97,098,877 (-)NCBIGRCm37mm9NCBIm37
MGSCv36697,076,407 - 97,114,346 (-)NCBImm8
Celera698,971,682 - 99,007,964 (-)NCBICelera
Cytogenetic Map6D3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12124942   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18799693  
PMID:19268448   PMID:21267068   PMID:21862448   PMID:21873635   PMID:22310717   PMID:23522784   PMID:29555813   PMID:32376684  


Genomics

Comparative Map Data
Eogt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39697,086,977 - 97,128,445 (-)NCBIGRCm39mm39
GRCm39 Ensembl697,086,985 - 97,126,143 (-)Ensembl
GRCm38697,110,016 - 97,151,484 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl697,110,024 - 97,149,182 (-)EnsemblGRCm38mm10GRCm38
MGSCv37697,060,938 - 97,098,877 (-)NCBIGRCm37mm9NCBIm37
MGSCv36697,076,407 - 97,114,346 (-)NCBImm8
Celera698,971,682 - 99,007,964 (-)NCBICelera
Cytogenetic Map6D3NCBI
EOGT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl368,975,217 - 69,013,684 (-)EnsemblGRCh38hg38GRCh38
GRCh38368,975,220 - 69,013,961 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37369,024,376 - 69,062,835 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36369,107,058 - 69,145,464 (-)NCBINCBI36hg18NCBI36
Celera368,952,460 - 68,990,886 (-)NCBI
Cytogenetic Map3p14.1NCBI
HuRef369,025,405 - 69,064,100 (-)NCBIHuRef
CHM1_1368,967,096 - 69,014,262 (-)NCBICHM1_1
Eogt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24129,718,897 - 129,756,558 (-)NCBI
Rnor_6.0 Ensembl4129,477,807 - 129,515,435 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04129,477,779 - 129,515,435 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04193,981,263 - 194,019,171 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44131,833,304 - 131,869,461 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14132,078,144 - 132,114,302 (-)NCBI
Celera4118,596,974 - 118,632,628 (-)NCBICelera
Cytogenetic Map4q34NCBI
Eogt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542118,846,420 - 18,879,985 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542118,845,626 - 18,879,008 (+)NCBIChiLan1.0ChiLan1.0
EOGT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1370,277,052 - 70,317,471 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl370,277,450 - 70,317,465 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0368,910,100 - 68,950,816 (-)NCBIMhudiblu_PPA_v0panPan3
EOGT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2022,722,919 - 22,757,136 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12022,722,142 - 22,757,188 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Eogt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366031,608,173 - 1,638,052 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EOGT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1350,396,629 - 50,436,199 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11350,396,625 - 50,436,218 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21355,478,584 - 55,518,845 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EOGT
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12230,002,069 - 30,040,851 (-)NCBI
ChlSab1.1 Ensembl2229,999,914 - 30,035,877 (-)Ensembl
Eogt
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247733,536,059 - 3,582,847 (-)NCBI

Position Markers
AW214473  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D3UniSTS
Whitehead/MRC_RH6987.55UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
11532719Sluc45_msusceptibility to lung cancer 45 (mouse)69260730698258933Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1310
Count of miRNA genes:663
Interacting mature miRNAs:829
Transcripts:ENSMUST00000054344, ENSMUST00000113387, ENSMUST00000130562, ENSMUST00000135187, ENSMUST00000136575, ENSMUST00000142116, ENSMUST00000142553
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_175313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC155727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000054344   ⟹   ENSMUSP00000061610
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,110,024 - 97,149,182 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113387   ⟹   ENSMUSP00000109014
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,112,001 - 97,148,927 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130562
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,112,186 - 97,118,754 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135187
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,111,972 - 97,148,883 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136575   ⟹   ENSMUSP00000117541
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,135,247 - 97,147,784 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142116   ⟹   ENSMUSP00000116362
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,145,324 - 97,148,924 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142553   ⟹   ENSMUSP00000115101
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,143,980 - 97,147,794 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204331   ⟹   ENSMUSP00000145303
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,145,270 - 97,148,860 (-)Ensembl
RefSeq Acc Id: NM_175313   ⟹   NP_780522
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,086,985 - 97,125,847 (-)NCBI
GRCm38697,110,024 - 97,148,886 (-)NCBI
MGSCv37697,060,938 - 97,098,877 (-)RGD
Celera698,971,682 - 99,007,964 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036165709   ⟹   XP_036021602
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,086,977 - 97,128,445 (-)NCBI
RefSeq Acc Id: XM_036165710   ⟹   XP_036021603
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,086,977 - 97,124,750 (-)NCBI
RefSeq Acc Id: XM_036165711   ⟹   XP_036021604
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,086,977 - 97,125,790 (-)NCBI
RefSeq Acc Id: XM_036165712   ⟹   XP_036021605
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,086,977 - 97,128,445 (-)NCBI
RefSeq Acc Id: XR_004942885
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,086,977 - 97,128,445 (-)NCBI
RefSeq Acc Id: XR_377399
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,089,147 - 97,128,445 (-)NCBI
GRCm38697,112,186 - 97,151,484 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_780522   ⟸   NM_175313
- Peptide Label: precursor
- UniProtKB: Q8BYW9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000145303   ⟸   ENSMUST00000204331
RefSeq Acc Id: ENSMUSP00000061610   ⟸   ENSMUST00000054344
RefSeq Acc Id: ENSMUSP00000109014   ⟸   ENSMUST00000113387
RefSeq Acc Id: ENSMUSP00000116362   ⟸   ENSMUST00000142116
RefSeq Acc Id: ENSMUSP00000115101   ⟸   ENSMUST00000142553
RefSeq Acc Id: ENSMUSP00000117541   ⟸   ENSMUST00000136575
RefSeq Acc Id: XP_036021602   ⟸   XM_036165709
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021605   ⟸   XM_036165712
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036021604   ⟸   XM_036165711
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036021603   ⟸   XM_036165710
- Peptide Label: isoform X1

Promoters
RGD ID:6838797
Promoter ID:MM_KWN:47000
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000113387,   OTTMUST00000056839,   OTTMUST00000056841,   OTTMUST00000056844
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,098,796 - 97,099,296 (-)MPROMDB
RGD ID:6890512
Promoter ID:EPDNEW_M8707
Type:initiation region
Name:Eogt_1
Description:Mus musculus EGF domain-specific O-linked N-acetylglucosaminetransferase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38697,148,866 - 97,148,926EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2141669 AgrOrtholog
Ensembl Genes ENSMUSG00000035245 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000061610 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000109014 UniProtKB/TrEMBL
  ENSMUSP00000115101 UniProtKB/TrEMBL
  ENSMUSP00000116362 UniProtKB/TrEMBL
  ENSMUSP00000117541 UniProtKB/TrEMBL
  ENSMUSP00000145303 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000054344 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113387 UniProtKB/TrEMBL
  ENSMUST00000136575 UniProtKB/TrEMBL
  ENSMUST00000142116 UniProtKB/TrEMBL
  ENSMUST00000142553 UniProtKB/TrEMBL
  ENSMUST00000204331 UniProtKB/TrEMBL
InterPro Glycosyltransferase_61 UniProtKB/Swiss-Prot
KEGG Report mmu:101351 UniProtKB/Swiss-Prot
MGD MGI:2141669 ENTREZGENE
NCBI Gene 101351 ENTREZGENE
PANTHER PTHR20961 UniProtKB/Swiss-Prot
Pfam DUF563 UniProtKB/Swiss-Prot
PhenoGen Eogt PhenoGen
PROSITE ER_TARGET UniProtKB/Swiss-Prot
UniProt A0A0N4SVY8_MOUSE UniProtKB/TrEMBL
  D3YWW8_MOUSE UniProtKB/TrEMBL
  D3Z052_MOUSE UniProtKB/TrEMBL
  D3Z459_MOUSE UniProtKB/TrEMBL
  D3Z5Q3_MOUSE UniProtKB/TrEMBL
  EOGT_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-22 Eogt  EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase  A130022J15Rik  RIKEN cDNA A130022J15 gene  Symbol and/or name change 5135510 APPROVED