Cmtm8 (CKLF-like MARVEL transmembrane domain containing 8)

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Gene: Cmtm8 (CKLF-like MARVEL transmembrane domain containing 8) Mus musculus

Analyze

Symbol:

Cmtm8

Name:

CKLF-like MARVEL transmembrane domain containing 8

RGD ID:

1550493

MGI Page

MGI

Description:

Predicted to be a structural constituent of myelin sheath. Predicted to be involved in myelination. Predicted to localize to integral component of membrane and nucleoplasm. Is expressed in several structures, including adenohypophysis; alimentary system; nasal cavity epithelium; respiratory system; and ventricular layer. Orthologous to human CMTM8 (CKLF like MARVEL transmembrane domain containing 8); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

2700018N07Rik; AA408515; chemokine-like factor super family 8; chemokine-like factor superfamily member 8; CKLF-like MARVEL transmembrane domain-containing protein 8; Cklfs; Cklfsf8

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	114,618,411 - 114,673,220 (-)	NCBI	GRCm39		mm39
GRCm38	9	114,789,343 - 114,844,152 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	114,789,345 - 114,844,156 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	114,698,463 - 114,753,270 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	114,638,043 - 114,692,850 (-)	NCBI			mm8
Celera	9	115,265,153 - 115,321,558 (-)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (ISO)

2-hydroxypropanoic acid (ISO)

3-chloropropane-1,2-diol (ISO)

4,4'-diaminodiphenylmethane (EXP)

4-hydroxyphenyl retinamide (EXP)

aflatoxin B1 (ISO)

aflatoxin B2 (ISO)

amphetamine (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene (EXP,ISO)

Benzo[ghi]perylene (EXP)

bisphenol A (ISO)

carbon nanotube (EXP)

cisplatin (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (ISO)

dioxygen (EXP)

diuron (ISO)

entinostat (ISO)

gentamycin (ISO)

ketamine (ISO)

leflunomide (ISO)

methamphetamine (ISO)

methylmercury chloride (ISO)

nefazodone (ISO)

ochratoxin A (ISO)

paracetamol (EXP)

phenobarbital (EXP)

pirinixic acid (ISO)

propiconazole (EXP)

protein kinase inhibitor (ISO)

rac-lactic acid (ISO)

rotenone (ISO)

silver atom (EXP)

silver(0) (EXP)

sodium dodecyl sulfate (ISO)

sunitinib (ISO)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

triphenyl phosphate (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chemotaxis (IEA)

myelination (IBA)

Cellular Component

extracellular space (IEA)

integral component of membrane (IBA)

membrane (IEA)

nucleoplasm (ISO)

Molecular Function

cytokine activity (IEA)

protein binding (ISO)

structural constituent of myelin sheath (IBA)

References

References - curated


1.	Han W, etal., Genomics 2003 Jun;81(6):609-17.
2.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.	MGD data from the GO Consortium
4.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:15489334	PMID:16141072	PMID:16141073	PMID:18973680	PMID:21267068	PMID:21873635	PMID:22696295

Genomics

Comparative Map Data

Cmtm8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	114,618,411 - 114,673,220 (-)	NCBI	GRCm39		mm39
GRCm38	9	114,789,343 - 114,844,152 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	114,789,345 - 114,844,156 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	114,698,463 - 114,753,270 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	114,638,043 - 114,692,850 (-)	NCBI			mm8
Celera	9	115,265,153 - 115,321,558 (-)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI

CMTM8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	3	32,238,679 - 32,370,321 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	3	32,238,680 - 32,370,321 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	3	32,280,171 - 32,411,817 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	32,255,175 - 32,386,817 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	3	32,255,174 - 32,386,815	NCBI
Celera	3	32,217,566 - 32,349,242 (+)	NCBI
Cytogenetic Map	3	p22.3	NCBI
HuRef	3	32,215,225 - 32,347,344 (+)	NCBI		HuRef
CHM1_1	3	32,230,141 - 32,361,788 (+)	NCBI		CHM1_1

Cmtm8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	8	122,848,249 - 122,913,597 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	122,848,501 - 122,904,913 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	122,160,334 - 122,226,662 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	119,209,101 - 119,265,441 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	8	119,228,839 - 119,285,178 (-)	NCBI
Celera	8	113,728,864 - 113,785,306 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Cmtm8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955430	23,638,734 - 23,728,365 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955430	23,638,734 - 23,728,365 (+)	NCBI	ChiLan1.0	ChiLan1.0

CMTM8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	32,472,720 - 32,602,124 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	32,472,794 - 32,601,767 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	3	32,153,673 - 32,287,746 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

CMTM8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	23	12,399,022 - 12,508,177 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	23	12,398,693 - 12,508,158 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Cmtm8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936473	22,775,503 - 22,874,665 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CMTM8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	18,243,471 - 18,420,778 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	18,243,379 - 18,350,386 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	20,414,847 - 20,549,120 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CMTM8
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1 Ensembl	15	76,748,220 - 76,874,262 (+)	Ensembl
ChlSab1.1	15	76,748,254 - 76,873,970 (+)	NCBI

Cmtm8
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624788	10,333,314 - 10,417,228 (+)	NCBI

Position Markers

D9Mit55

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	9	114,820,285 - 114,820,396	UniSTS	GRCm38
MGSCv37	9	114,729,403 - 114,729,514	UniSTS	GRCm37
Celera	9	115,297,677 - 115,297,780	UniSTS
Cytogenetic Map	9	F3	UniSTS
cM Map	9	61.0	UniSTS
Whitehead Genetic	9	60.1	UniSTS

RH124721

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	9	114,789,609 - 114,789,698	UniSTS	GRCm38
MGSCv37	9	114,698,727 - 114,698,816	UniSTS	GRCm37
Celera	9	115,265,416 - 115,265,505	UniSTS
Cytogenetic Map	9	F3	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4141833	W10q13_m	weight 10 weeks QTL 13 (mouse)			Not determined			63332429	120362868	Mouse
4141545	Tailaq2_m	tail length adjusted QTL 2 (mouse)			Not determined			63332429	120362868	Mouse
1357635	Splq4_m	spleen weight QTL 4 (mouse)			Not determined		9	63332429	120362868	Mouse
1301732	Char1_m	P. chabaudi malaria resistance QTL 1 (mouse)			Not determined		9	81798268	115798392	Mouse
1300884	Sluc11_m	susceptibility to lung cancer 11 (mouse)			Not determined		9	82910333	116910428	Mouse
1357461	Idd2_m	insulin dependent diabetes susceptibility 2 (mouse)			Not determined		9	82910333	116910428	Mouse
10766454	Char10_m	P. chabaudi malaria resistance QTL 10 (mouse)					9	82910333	116910428	Mouse
1301487	Nociq1_m	nociceptive sensitivity inflammatory QTL 1 (mouse)			Not determined		9	84528818	118528921	Mouse
1300549	Bbaa17_m	B. burgdorferi-associated arthritis 17 (mouse)			Not determined		9	86230401	120230530	Mouse
1302103	Dob2_m	dietary obesity 2 (mouse)			Not determined		9	86239845	120289624	Mouse
11251716	Siim2_m	stress induced immobility 2 (mouse)					9	86748483	120748483	Mouse
12880422	V25Dq6_m	vitamin D inactive form serum level QTL 6 (mouse)					9	87800000	121800000	Mouse
10412242	Alpq8_m	alcohol preference QTL 8 (mouse)			Not determined		9	89284925	123284925	Mouse
1301649	Psl1_m	promotion susceptibility QTL 1 (mouse)			Not determined		9	89412277	123412396	Mouse
18182932	Metl3_m	metabolite locus 3, N-acetylglutamate (mouse)					9	89563342	123563342	Mouse
1357657	Pymr_m	Plasmodium yoelli malaria resistance (mouse)			Not determined		9	89977005	118938021	Mouse
12910770	Splic1_m	spleen iron content 1 (mouse)					9	91413879	124595110	Mouse
12910772	Lvic6_m	liver iron content 6 (mouse)					9	91413879	124595110	Mouse
12910773	Splic3_m	spleen iron content 3 (mouse)					9	91413879	124595110	Mouse
1558767	Skmw11_m	skeletal muscle weight 11 (mouse)			Not determined		9	91641084	124595110	Mouse
13463474	Hbbcq5_m	hemoglobin concentration QTL 5 (mouse)					9	91641084	124595110	Mouse
13463475	Hctq7_m	hematocrit QTL 7 (mouse)					9	91641084	124595110	Mouse
13463477	Rbc9_m	red blood cell count 9 (mouse)					9	91641084	124595110	Mouse
13463478	Mchq18_m	mean corpuscular hemoglobin QTL 18 (mouse)					9	91641084	124595110	Mouse
13463480	Mchcq2_m	mean corpuscular hemoglobin concentration QTL 2 (mouse)					9	91641084	124595110	Mouse
12904937	Edlmmq9_m	extensor digitorum longus muscle mass QTL 9 (mouse)					9	91683173	124595110	Mouse
12904947	Tammq7_m	tibialis anterior muscle mass QTL 7 (mouse)					9	91683173	124595110	Mouse
12904961	Gmmq7_m	gastrocnemius muscle mass QTL 7 (mouse)					9	91683173	124595110	Mouse
1302001	Bdln5_m	body length 5 (mouse)			Not determined		9	93762590	124595110	Mouse
1301484	Bwq6_m	body weight (mouse)			Not determined		9	93762590	124595110	Mouse
14746992	Manh67_m	mandible shape 67 (mouse)					9	94036768	124595110	Mouse
11537364	Cnes5_m	C. neoformans susceptibility locus 5 (mouse)					9	96917590	124595110	Mouse
1301297	Lcho1_m	liver cholesterol 1 (mouse)			Not determined		9	101060861	124595110	Mouse
1357627	Tgq2_m	triglyceride QTL 2 (mouse)			Not determined		9	102000187	124595110	Mouse
1357648	Obq18_m	obesity QTL 18 (mouse)			Not determined		9	102000187	124595110	Mouse
1301789	Pbwg4_m	postnatal body weight growth 4 (mouse)			Not determined		9	103289445	124595110	Mouse
10412290	Pvacm1l_m	plasma vascular cell adhesion molecule 1 levels (mouse)			Not determined		9	103289445	124595110	Mouse
12879896	Berr3_m	berghei resistance locus 3 (mouse)					9	103289445	124595110	Mouse
13515058	Adip20d_m	adiposity 20d (mouse)					9	108915010	118915010	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	109
Count of miRNA genes:	91
Interacting mature miRNAs:	95
Transcripts:	ENSMUST00000047013
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_027294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011242999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC163344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK012262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK137729	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK161079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY243513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC027554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000047013 ⟹ ENSMUSP00000043706

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	114,789,345 - 114,844,152 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000213264

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	114,795,879 - 114,844,101 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000213929

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	114,841,610 - 114,844,156 (-)	Ensembl

RefSeq Acc Id:

NM_027294 ⟹ NP_081570

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	114,618,413 - 114,673,220 (-)	NCBI
GRCm38	9	114,789,345 - 114,844,152 (-)	NCBI
MGSCv37	9	114,698,463 - 114,753,270 (-)	RGD
Celera	9	115,265,153 - 115,321,558 (-)	RGD
cM Map	9		ENTREZGENE

Sequence:

show sequence

GCAGTCCACTGCCACCGGTCGCCAGCGATCCCGTTCCCGGGTCTCCGAGCAGACCCAGAGTGCG
CTCGCCGAGGTGTTGGGACACTTGCGGACCTGACCCTGGAGATCACCCGGGTTTGCCCGCCTCC
CATCATCCGCGATTCCCTGGCCCGCGATCCTGAGCCCAGGGAACTCATTGGGTGGGGGTAGGGT
CCTCGGGGACCCGGGCCAGCTCCCGGGGCGACGATGGAAGAGCAGCAGCGCGCGCGCTCGCACA
CGGTCACCACCACTACCAGCTCCTTTGCGGAGAACTTCTCCACCACCAGCAGCAGCTTCGCTTA
CGACCGAGAGTTCCTCCGTACCCCGCCGGGGCTCCTGATCGTAGCCGAGATCGTCTTGGGACTG
CTGGTGTGGACTCTCATCGCTGGCACTGAGTATTTTAGAGTCCCTGCTTTTGGCTGGGTAATGT
TTGTGGCTGTCTTCTACTGGGTCCTCACCGTCTTCTTCCTCATTGTCTACATCACCCTGACTTA
CACCAGGATTCCCCAGGTGCCCTGGACCACAGTGGGCCTGTGCTTTAATGGCAGTGCCTTCGTC
TTGTACTTCTCAGCTGCCATAGTGGACGCATCTTCTGTCTCCCCAGAGAAGGAAGGGCACAACT
TCAACAGCTGGGCAGCCTCCTCGTTCTTTGCCTTCCTGGTCACCATCTGCTATGCTGGAAACAC
GTACTTCAGTTTCATAGCCTGGAGATCGAGGACGGCACAGTGACTCTCCCTCCTCAGATAACAG
AGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAAAGAAAGAAAGAAAGAAA
GAAAGAAAGAAAGGAAGAAAGAAAAACAGTTGTAGCTATAATGTATATTGCCCCAGAATTGTAT
TTAACTAATGTTTTTATATCTTAGTTAAATTAGCTCCCAGTGTCTTGTTACAATTGAGCTGGAT
ATTTACTTGGGGAGTGCTGCGGCTTCTAATGAACCCTGAAGTCTCCTGATGTCCTTCTAGCCTT
TATTTTTCTTACACAATGTATAAATAAATTGCTAAATGTT

hide sequence

RefSeq Acc Id:

XM_011242999 ⟹ XP_011241301

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	114,618,411 - 114,648,097 (-)	NCBI
GRCm38	9	114,789,343 - 114,819,022 (-)	NCBI

Sequence:

show sequence

GCATAAGCAATGGGAGTCGGCGTTTTGGGGGTTGCTAGATGACATGGGCATTGTTTGGATAAAC
CTAAAGGACTCTGCCTGGCTGTTAGCAGTAGCATCTTTGCCTTGTACATAACGGTTTAGCGTCA
TAAAAGTCTTGGGACTGCTGGTGTGGACTCTCATCGCTGGCACTGAGTATTTTAGAGTCCCTGC
TTTTGGCTGGGTAATGTTTGTGGCTGTCTTCTACTGGGTCCTCACCGTCTTCTTCCTCATTGTC
TACATCACCCTGACTTACACCAGGATTCCCCAGGTGCCCTGGACCACAGTGGGCCTGTGCTTTA
ATGGCAGTGCCTTCGTCTTGTACTTCTCAGCTGCCATAGTGGACGCATCTTCTGTCTCCCCAGA
GAAGGAAGGGCACAACTTCAACAGCTGGGCAGCCTCCTCGTTCTTTGCCTTCCTGGTCACCATC
TGCTATGCTGGAAACACGTACTTCAGTTTCATAGCCTGGAGATCGAGGACGGCACAGTGACTCT
CCCTCCTCAGATAACAGAGAAGACGACACACCAGAACGAATCCCACTGTTATTAAAAGAAAGAA
AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGAAAAACAGTTGTAGCTATAATGTATA
TTGCCCCAGAATTGTATTTAACTAATGTTTTTATATCTTAGTTAAATTAGCTCCCAGTGTCTTG
TTACAATTGAGCTGGATATTTACTTGGGGAGTGCTGCGGCTTCTAATGAACCCTGAAGTCTCCT
GATGTCCTTCTAGCCTTTATTTTTCTTACACAATGTATAAATAAATTGCTAAATGTTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_081570	(Get FASTA)	NCBI Sequence Viewer
	XP_011241301	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH27554	(Get FASTA)	NCBI Sequence Viewer
	AAO89236	(Get FASTA)	NCBI Sequence Viewer
	BAB28125	(Get FASTA)	NCBI Sequence Viewer
	EDL09293	(Get FASTA)	NCBI Sequence Viewer
	EDL09294	(Get FASTA)	NCBI Sequence Viewer
	Q9CZR4	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_081570 ⟸ NM_027294
- UniProtKB:	Q9CZR4 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEEQQRARSHTVTTTTSSFAENFSTTSSSFAYDREFLRTPPGLLIVAEIVLGLLVWTLIAGTEY FRVPAFGWVMFVAVFYWVLTVFFLIVYITLTYTRIPQVPWTTVGLCFNGSAFVLYFSAAIVDAS SVSPEKEGHNFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTAQ hide sequence

RefSeq Acc Id:	XP_011241301 ⟸ XM_011242999
- Peptide Label:	isoform X1
- Sequence:	show sequence MFVAVFYWVLTVFFLIVYITLTYTRIPQVPWTTVGLCFNGSAFVLYFSAAIVDASSVSPEKEGH NFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTAQ hide sequence

RefSeq Acc Id:

ENSMUSP00000043706 ⟸ ENSMUST00000047013

Protein Domains

MARVEL

Promoters

RGD ID:

6844120

Promoter ID:

MM_KWN:59034

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, ES_Cell, Kidney, Liver, Lung

Transcripts:

NM_027294, UC009RYH.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	9	114,751,696 - 114,753,597 (-)	MPROMDB

RGD ID:

8671126

Promoter ID:

EPDNEW_M13593

Type:

initiation region

Name:

Cmtm8_1

Description:

Mus musculus CKLF-like MARVEL transmembrane domain containing8 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	9	114,844,150 - 114,844,210	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2447167	AgrOrtholog
Ensembl Genes	ENSMUSG00000041012	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSMUSP00000043706	ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000047013	ENTREZGENE, UniProtKB/Swiss-Prot
InterPro	MAL	UniProtKB/Swiss-Prot
	Marvel	UniProtKB/Swiss-Prot
KEGG Report	mmu:70031	UniProtKB/Swiss-Prot
MGD	MGI:2447167	ENTREZGENE
NCBI Gene	70031	ENTREZGENE
Pfam	MARVEL	UniProtKB/Swiss-Prot
PhenoGen	Cmtm8	PhenoGen
PRINTS	MALPROTEIN	UniProtKB/Swiss-Prot
PROSITE	MARVEL	UniProtKB/Swiss-Prot
UniGene	Mm.150064	ENTREZGENE
UniProt	CKLF8_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)