Myh1 (myosin, heavy polypeptide 1, skeletal muscle, adult) - Rat Genome Database

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Gene: Myh1 (myosin, heavy polypeptide 1, skeletal muscle, adult) Mus musculus
Analyze
Symbol: Myh1
Name: myosin, heavy polypeptide 1, skeletal muscle, adult
RGD ID: 1550486
MGI Page MGI
Description: Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in muscle contraction. Located in A band and intercalated disc. Is expressed in several structures, including gonad; gut; hemolymphoid system gland; integumental system; and musculature. Orthologous to human MYH1 (myosin heavy chain 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A530084A17Rik; I; IId; IId/x; MdMs; MGC117705; MHC-2X/D; MHC2X/D; myHC-2x; MYHC-I; MyHC-IId; MyHC-IId/x; MYHC-IIX; MyHC-IIx/d; Myhs-; Myhs-f; Myhs-f2; Myhsf; Myhsf2; myosin heavy chain 1; myosin heavy chain 2X; myosin heavy chain, skeletal muscle, adult 1; myosin-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391167,090,922 - 67,115,401 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1167,090,878 - 67,115,401 (+)EnsemblGRCm39 Ensembl
GRCm381167,200,102 - 67,224,577 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1167,200,052 - 67,224,575 (+)EnsemblGRCm38mm10GRCm38
MGSCv371167,013,616 - 67,038,077 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361167,016,309 - 67,040,770 (+)NCBIMGSCv36mm8
Celera1174,138,951 - 74,163,820 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1140.59NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
muscle contraction  (IBA,ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1324916   PMID:1371481   PMID:1728586   PMID:1985022   PMID:3829126   PMID:3864153   PMID:6196357   PMID:6879174   PMID:8136524   PMID:8404542   PMID:8948582   PMID:8950513  
PMID:9382868   PMID:9585413   PMID:10077619   PMID:10349636   PMID:10588881   PMID:10694423   PMID:10708514   PMID:11023856   PMID:11042159   PMID:11076861   PMID:11150240   PMID:11551968  
PMID:11732910   PMID:11744674   PMID:12477932   PMID:12547197   PMID:12919077   PMID:14667415   PMID:15719023   PMID:15749074   PMID:16024798   PMID:16141072   PMID:16141073   PMID:16494860  
PMID:16575183   PMID:16598734   PMID:16819597   PMID:17210568   PMID:17559643   PMID:17584907   PMID:17881575   PMID:17904117   PMID:18310078   PMID:18417546   PMID:18761673   PMID:18945940  
PMID:19423573   PMID:19506036   PMID:19801895   PMID:19922871   PMID:20417199   PMID:20534536   PMID:21677750   PMID:21873635   PMID:21884692   PMID:21985497   PMID:22351927   PMID:22460713  
PMID:22673621   PMID:22940113   PMID:23868259   PMID:24194600   PMID:24301466   PMID:24852826   PMID:24876128   PMID:24938781   PMID:25220152   PMID:25715398   PMID:25753484   PMID:25980463  
PMID:26062940   PMID:26075897   PMID:26153230   PMID:26586200   PMID:26586428   PMID:26954549   PMID:26993635   PMID:27184118   PMID:27185876   PMID:27383612   PMID:27597886   PMID:28153048  
PMID:28170423   PMID:28378742   PMID:28386024   PMID:28569755   PMID:28827394   PMID:29168801   PMID:29323161   PMID:29653945   PMID:29679560   PMID:29758057   PMID:29768404   PMID:30081710  
PMID:30389854   PMID:30737693   PMID:31420575   PMID:31618630   PMID:31960486   PMID:32093891   PMID:32094117   PMID:32212902   PMID:32325033   PMID:33482080   PMID:33667029   PMID:33742095  
PMID:34158500   PMID:35050341   PMID:35210422   PMID:35759444   PMID:36108743   PMID:36154712   PMID:36200826   PMID:36515178   PMID:36709857   PMID:36815629   PMID:36899856   PMID:37160119  
PMID:37723138   PMID:38303699  


Genomics

Comparative Map Data
Myh1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391167,090,922 - 67,115,401 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1167,090,878 - 67,115,401 (+)EnsemblGRCm39 Ensembl
GRCm381167,200,102 - 67,224,577 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1167,200,052 - 67,224,575 (+)EnsemblGRCm38mm10GRCm38
MGSCv371167,013,616 - 67,038,077 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361167,016,309 - 67,040,770 (+)NCBIMGSCv36mm8
Celera1174,138,951 - 74,163,820 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1140.59NCBI
MYH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381710,492,307 - 10,518,542 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1710,492,307 - 10,518,542 (-)EnsemblGRCh38hg38GRCh38
GRCh371710,395,624 - 10,421,859 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361710,336,349 - 10,362,584 (-)NCBINCBI36Build 36hg18NCBI36
Build 341710,336,352 - 10,360,684NCBI
Celera1710,426,467 - 10,452,723 (-)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef1710,295,198 - 10,321,455 (-)NCBIHuRef
CHM1_11710,405,462 - 10,431,716 (-)NCBICHM1_1
T2T-CHM13v2.01710,399,791 - 10,426,053 (-)NCBIT2T-CHM13v2.0
Myh1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81052,384,810 - 52,408,698 (+)NCBIGRCr8
mRatBN7.21051,885,913 - 51,909,699 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1051,885,913 - 51,946,295 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1056,542,792 - 56,566,565 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01056,031,797 - 56,055,568 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01051,542,188 - 51,565,983 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01053,740,841 - 53,764,610 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1053,713,938 - 53,848,347 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01053,493,997 - 53,517,766 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41053,894,388 - 53,917,948 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11053,928,512 - 53,931,551 (+)NCBI
Celera1051,068,765 - 51,092,552 (+)NCBICelera
Cytogenetic Map10q24NCBI
Myh1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554676,685,753 - 6,707,491 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554676,684,104 - 6,707,597 (+)NCBIChiLan1.0ChiLan1.0
MYH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21963,230,666 - 63,257,025 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11768,041,211 - 68,067,576 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01741,134,861 - 41,161,226 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11745,882,261 - 45,908,472 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1745,882,261 - 45,908,467 (+)Ensemblpanpan1.1panPan2
MYH2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1534,810,791 - 34,838,177 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl534,810,921 - 34,837,904 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha534,947,344 - 34,972,447 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0534,915,611 - 34,943,047 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl534,915,741 - 34,942,730 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1534,881,239 - 34,906,337 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0534,838,682 - 34,863,782 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0535,019,632 - 35,044,733 (-)NCBIUU_Cfam_GSD_1.0
Myh1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560249,889,783 - 49,914,464 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365953,363,975 - 3,388,385 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365953,363,974 - 3,416,849 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1255,225,590 - 55,249,340 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11255,225,581 - 55,251,495 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21257,965,087 - 57,984,759 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1169,834,434 - 9,860,744 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605911,481,624 - 11,507,924 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Myh1
1023 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:248
Count of miRNA genes:163
Interacting mature miRNAs:166
Transcripts:ENSMUST00000018637, ENSMUST00000075734, ENSMUST00000124516, ENSMUST00000129018
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115925661769482699Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
4141642Ltxs2_mlethal factor toxin susceptibility 2 (mouse)Not determined116304211368500330Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse

Markers in Region
Myh1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381167,220,563 - 67,220,710UniSTSGRCm38
MGSCv371167,034,065 - 67,034,212UniSTSGRCm37
Celera1174,159,808 - 74,159,955UniSTS
Cytogenetic Map11B3UniSTS
cM Map1135.0UniSTS
cM Map1135.0UniSTS
cM Map1135.0UniSTS
cM Map1135.0UniSTS
cM Map1135.0UniSTS
380N16T7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381167,206,746 - 67,206,865UniSTSGRCm38
MGSCv371167,020,248 - 67,020,367UniSTSGRCm37
Celera1174,145,992 - 74,146,111UniSTS
Cytogenetic Map11B3UniSTS
cM Map1135.0UniSTS
Myh1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B3UniSTS
Myh1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381167,224,475 - 67,224,595UniSTSGRCm38
MGSCv371167,037,977 - 67,038,097UniSTSGRCm37
Celera1174,163,720 - 74,163,840UniSTS
Cytogenetic Map11B3UniSTS
Myh1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B3UniSTS
cM Map1135.0UniSTS
Myh1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381167,201,825 - 67,202,136UniSTSGRCm38
MGSCv371167,015,327 - 67,015,638UniSTSGRCm37
Celera1174,140,661 - 74,140,972UniSTS
Cytogenetic Map11B3UniSTS
cM Map1135.0UniSTS
Myh1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381167,237,715 - 67,237,818UniSTSGRCm38
MGSCv371167,051,217 - 67,051,320UniSTSGRCm37
Celera1174,180,920 - 74,181,023UniSTS
Cytogenetic Map11B3UniSTS
cM Map1135.0UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000018637   ⟹   ENSMUSP00000018637
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1167,090,937 - 67,115,321 (+)Ensembl
GRCm38.p6 Ensembl1167,200,111 - 67,224,495 (+)Ensembl
RefSeq Acc Id: ENSMUST00000075734   ⟹   ENSMUSP00000075147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1167,091,230 - 67,115,399 (+)Ensembl
GRCm38.p6 Ensembl1167,200,404 - 67,224,573 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124516   ⟹   ENSMUSP00000117569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1167,090,878 - 67,115,401 (+)Ensembl
GRCm38.p6 Ensembl1167,200,052 - 67,224,575 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129018   ⟹   ENSMUSP00000115583
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1167,090,964 - 67,093,081 (+)Ensembl
GRCm38.p6 Ensembl1167,200,138 - 67,202,255 (+)Ensembl
RefSeq Acc Id: NM_030679   ⟹   NP_109604
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,090,928 - 67,115,401 (+)NCBI
GRCm381167,200,102 - 67,224,575 (+)NCBI
MGSCv371167,013,616 - 67,038,077 (+)RGD
Celera1174,138,951 - 74,163,820 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017314318   ⟹   XP_017169807
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,090,922 - 67,115,401 (+)NCBI
GRCm381167,200,109 - 67,224,577 (+)NCBI
Sequence:
RefSeq Acc Id: NP_109604   ⟸   NM_030679
- UniProtKB: Q32P18 (UniProtKB/Swiss-Prot),   Q5SX40 (UniProtKB/Swiss-Prot),   B2RWX0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169807   ⟸   XM_017314318
- Peptide Label: isoform X1
- UniProtKB: Q32P18 (UniProtKB/Swiss-Prot),   Q5SX40 (UniProtKB/Swiss-Prot),   B2RWX0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000117569   ⟸   ENSMUST00000124516
RefSeq Acc Id: ENSMUSP00000115583   ⟸   ENSMUST00000129018
RefSeq Acc Id: ENSMUSP00000075147   ⟸   ENSMUST00000075734
RefSeq Acc Id: ENSMUSP00000018637   ⟸   ENSMUST00000018637
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5SX40-F1-model_v2 AlphaFold Q5SX40 1-1942 view protein structure

Promoters
RGD ID:8675070
Promoter ID:EPDNEW_M15566
Type:multiple initiation site
Name:Myh1_1
Description:Mus musculus myosin, heavy polypeptide 1, skeletal muscle, adult, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381167,200,102 - 67,200,162EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1339711 AgrOrtholog
Ensembl Genes ENSMUSG00000056328 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000018637 ENTREZGENE
  ENSMUST00000018637.15 UniProtKB/Swiss-Prot
  ENSMUST00000075734.6 UniProtKB/Swiss-Prot
  ENSMUST00000124516 ENTREZGENE
  ENSMUST00000124516.8 UniProtKB/Swiss-Prot
  ENSMUST00000129018.8 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.5.340 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.5.370 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.5.4820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.58.530 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.30.360 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.10.250.2420 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin VI head, motor domain, U50 subdomain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro IQ_motif_EF-hand-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_head_motor_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_S1_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_tail UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  XRCC4-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:17879 UniProtKB/Swiss-Prot
MGD MGI:1339711 ENTREZGENE
NCBI Gene 17879 ENTREZGENE
PANTHER MYOSIN UniProtKB/TrEMBL
  MYOSIN HEAVY CHAIN, NON-MUSCLE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYOSIN-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYOSIN-2 UniProtKB/TrEMBL
  MYOSIN_TAIL_1 DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  MYOTONIC DYSTROPHY S/T KINASE-RELATED UniProtKB/TrEMBL
Pfam Myosin_head UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_tail_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Myh1 PhenoGen
PRINTS MYOSINHEAVY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE MYOSIN_MOTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50096 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART MYSc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Myosin rod fragments UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin S1 fragment, N-terminal domain UniProtKB/TrEMBL
  SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tropomyosin UniProtKB/TrEMBL
UniProt B2RWX0 ENTREZGENE, UniProtKB/TrEMBL
  MYH1_MOUSE UniProtKB/Swiss-Prot
  Q1WNQ6_MOUSE UniProtKB/TrEMBL
  Q32P18 ENTREZGENE
  Q3TT35_MOUSE UniProtKB/TrEMBL
  Q5SX40 ENTREZGENE
  Q8BLW0_MOUSE UniProtKB/TrEMBL
  Q9ESW6_MOUSE UniProtKB/TrEMBL
  Q9WUS6_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q32P18 UniProtKB/Swiss-Prot