Ripor2 (RHO family interacting cell polarization regulator 2) - Rat Genome Database

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Gene: Ripor2 (RHO family interacting cell polarization regulator 2) Mus musculus
Analyze
Symbol: Ripor2
Name: RHO family interacting cell polarization regulator 2
RGD ID: 1550332
MGI Page MGI
Description: Enables identical protein binding activity. Involved in several processes, including auditory receptor cell stereocilium organization; cellular response to mechanical stimulus; and positive regulation of neutrophil migration. Located in stereocilium. Is expressed in several structures, including brain; heart; inner ear; liver; and lung. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 104. Orthologous to human RIPOR2 (RHO family interacting cell polarization regulator 2); INTERACTS WITH 1,2-dimethylhydrazine; 3,4-methylenedioxymethamphetamine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1700108N18Rik; 6330500D04Rik; AI225904; E430013J17Rik; Fam65; Fam65b; family with sequence similarity 65, member B; hypothetical protein LOC193385; likely orthologue of H. sapiens chromosome 6 open reading frame 32 (C6orf32); rho family-interacting cell polarization regulator 2; RP23-461O24.1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391324,685,369 - 24,917,789 (+)NCBIGRCm39mm39
GRCm39 Ensembl1324,685,508 - 24,917,799 (+)Ensembl
GRCm381324,501,524 - 24,733,806 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1324,501,525 - 24,733,816 (+)EnsemblGRCm38mm10GRCm38
MGSCv371324,706,479 - 24,825,675 (+)NCBIGRCm37mm9NCBIm37
MGSCv361324,676,030 - 24,713,412 (+)NCBImm8
Celera1324,845,270 - 24,964,462 (+)NCBICelera
Cytogenetic Map13A3.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
Benzo[k]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (EXP)
buta-1,3-diene  (EXP)
butan-1-ol  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP)
cobalt dichloride  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fenvalerate  (ISO)
folic acid  (EXP)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
isobutanol  (ISO)
melphalan  (ISO)
mercury dibromide  (ISO)
methamphetamine  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N-nitrosodiethylamine  (EXP)
nickel atom  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (ISO)
perfluorononanoic acid  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
tetraphene  (EXP)
topotecan  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
tungsten  (EXP)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12693553   PMID:16141072   PMID:16141073   PMID:17150207   PMID:21267068   PMID:21677750  
PMID:24687993   PMID:24958875   PMID:25588844   PMID:27269051   PMID:28049845   PMID:30254631   PMID:30280293   PMID:30349076   PMID:31218594   PMID:32325033  


Genomics

Comparative Map Data
Ripor2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391324,685,369 - 24,917,789 (+)NCBIGRCm39mm39
GRCm39 Ensembl1324,685,508 - 24,917,799 (+)Ensembl
GRCm381324,501,524 - 24,733,806 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1324,501,525 - 24,733,816 (+)EnsemblGRCm38mm10GRCm38
MGSCv371324,706,479 - 24,825,675 (+)NCBIGRCm37mm9NCBIm37
MGSCv361324,676,030 - 24,713,412 (+)NCBImm8
Celera1324,845,270 - 24,964,462 (+)NCBICelera
Cytogenetic Map13A3.1NCBI
RIPOR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl624,804,282 - 25,042,170 (-)EnsemblGRCh38hg38GRCh38
GRCh38624,804,284 - 25,042,288 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37624,804,512 - 25,042,396 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36624,947,566 - 24,985,562 (-)NCBINCBI36hg18NCBI36
Build 34624,947,575 - 24,985,562NCBI
Celera626,037,884 - 26,138,491 (-)NCBI
Cytogenetic Map6p22.3NCBI
HuRef624,753,953 - 24,854,449 (-)NCBIHuRef
CHM1_1624,808,618 - 24,913,299 (-)NCBICHM1_1
Ripor2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21740,323,867 - 40,547,482 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl1742,324,594 - 42,422,053 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01742,324,594 - 42,549,907 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01744,192,188 - 44,415,275 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41747,394,370 - 47,492,203 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11747,404,460 - 47,517,088 (-)NCBI
Celera1739,960,748 - 40,058,550 (-)NCBICelera
Cytogenetic Map17p11NCBI
Ripor2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554832,048,324 - 2,256,589 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554832,048,236 - 2,257,078 (+)NCBIChiLan1.0ChiLan1.0
RIPOR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1624,973,412 - 25,099,034 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl624,973,412 - 25,204,745 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0624,642,239 - 24,768,074 (-)NCBIMhudiblu_PPA_v0panPan3
RIPOR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13522,823,053 - 23,041,765 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3522,824,106 - 23,041,743 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3522,790,986 - 23,009,662 (-)NCBI
ROS_Cfam_1.03522,945,432 - 23,164,390 (-)NCBI
UMICH_Zoey_3.13522,750,468 - 22,968,713 (-)NCBI
UNSW_CanFamBas_1.03522,799,010 - 23,016,747 (-)NCBI
UU_Cfam_GSD_1.03524,234,583 - 24,454,231 (-)NCBI
Ripor2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049462,388,691 - 2,556,595 (+)NCBI
SpeTri2.0NW_0049366711,064,937 - 1,232,985 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RIPOR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl719,587,685 - 19,838,093 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1719,609,358 - 19,842,345 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2720,762,727 - 20,990,748 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RIPOR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11747,197,067 - 47,441,413 (+)NCBI
ChlSab1.1 Ensembl1747,308,984 - 47,451,779 (+)Ensembl
Vero_WHO_p1.0NW_02366604424,739,532 - 24,983,846 (-)NCBI

Position Markers
RH136000  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381324,733,013 - 24,733,120UniSTSGRCm38
MGSCv371324,824,882 - 24,824,989UniSTSGRCm37
Celera1324,963,669 - 24,963,776UniSTS
Cytogenetic Map13A3.2UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301255Cd4ts6_mCD4 T cell subset 6 (mouse)Not determined13133994099Mouse
10449140Eosn2_meosinophil differential 2 (mouse)134672634046726Mouse
15039338Nmrs34_mNAFLD-associated magnetic resonance shift 34 (mouse)134672634046726Mouse
1301455Bmd3_mbone mineral density 3 (mouse)Not determined13329344237293650Mouse
10045624Heal24_mwound healing/regeneration (mouse)Not determined13329344237293650Mouse
10045625Heal23_mwound healing/regeneration 23 (mouse)Not determined13329344237293650Mouse
1301367Twq1_mtestis weight QTL 1 (mouse)Not determined13343134237431502Mouse
1301733Heal3_mwound healing/regeneration 3 (mouse)Not determined13349603037496173Mouse
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13390000075900000Mouse
1558898Hpi1_mhapatic PMN infiltration 1 (mouse)Not determined13436402652947604Mouse
10402494Igmsc1_mimmunoglobulin M secreting cells 1 (mouse)Not determined131699396044765084Mouse
1301984Pbd2_mpeak bone density 2 (mouse)Not determined131701492338763430Mouse
1301880Hypt_mhypertension (mouse)Not determined131797280951972941Mouse
13463469Gssq1_mglomerulosclerosis severity QTL 1 (mouse)131887692552877067Mouse
12880423V25Dq7_mvitamin D inactive form serum level QTL 7 (mouse)131940000053400000Mouse
1301015Sysbp2_msystolic blood pressure 2 (mouse)Not determined132029344259673791Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20293442112761890Mouse
1357591Tesq1_mtestis weight QTL 1 (mouse)Not determined132043134255572704Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132043134272237070Mouse
10045618Heal17_mwound healing/regeneration 17 (mouse)Not determined132056296354563080Mouse
1558844Lith15_mlithogenic gene 15 (mouse)Not determined132176326255763430Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4757
Count of miRNA genes:948
Interacting mature miRNAs:1367
Transcripts:ENSMUST00000038477, ENSMUST00000058009, ENSMUST00000091694, ENSMUST00000110383, ENSMUST00000110384, ENSMUST00000132689, ENSMUST00000134370, ENSMUST00000138547, ENSMUST00000175986, ENSMUST00000176303, ENSMUST00000177174, ENSMUST00000177298, ENSMUST00000177489
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001080381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA190042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL513014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL589699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL589744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL591851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB638362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE987053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY123481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY727237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO041923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000038477   ⟹   ENSMUSP00000043663
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,638,696 - 24,706,001 (+)Ensembl
RefSeq Acc Id: ENSMUST00000058009   ⟹   ENSMUSP00000051342
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,638,684 - 24,697,500 (+)Ensembl
RefSeq Acc Id: ENSMUST00000091694   ⟹   ENSMUSP00000089286
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,614,610 - 24,706,001 (+)Ensembl
RefSeq Acc Id: ENSMUST00000110383   ⟹   ENSMUSP00000106012
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,582,189 - 24,733,816 (+)Ensembl
RefSeq Acc Id: ENSMUST00000110384   ⟹   ENSMUSP00000106013
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,638,648 - 24,733,816 (+)Ensembl
RefSeq Acc Id: ENSMUST00000132689   ⟹   ENSMUSP00000115689
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,614,627 - 24,705,897 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134370
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,614,610 - 24,702,162 (+)Ensembl
RefSeq Acc Id: ENSMUST00000138547
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,638,713 - 24,695,725 (+)Ensembl
RefSeq Acc Id: ENSMUST00000175986
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,687,800 - 24,694,059 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176303
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,672,939 - 24,678,019 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177174
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,675,472 - 24,678,015 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177298
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,638,650 - 24,672,005 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177489
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,710,063 - 24,715,684 (+)Ensembl
RefSeq Acc Id: ENSMUST00000238974   ⟹   ENSMUSP00000159186
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1324,501,525 - 24,705,198 (+)Ensembl
RefSeq Acc Id: NM_001080381   ⟹   NP_001073850
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,822,631 - 24,889,984 (+)NCBI
GRCm381324,638,648 - 24,706,001 (+)NCBI
MGSCv371324,706,479 - 24,825,675 (+)RGD
Celera1324,812,851 - 24,964,462 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001286100   ⟹   NP_001273029
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,766,172 - 24,917,789 (+)NCBI
GRCm381324,582,189 - 24,733,806 (+)NCBI
Celera1324,812,851 - 24,964,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001286101   ⟹   NP_001273030
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,798,589 - 24,889,984 (+)NCBI
GRCm381324,614,606 - 24,706,001 (+)NCBI
Celera1324,812,851 - 24,964,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_029679   ⟹   NP_083955
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,822,631 - 24,917,789 (+)NCBI
GRCm381324,638,648 - 24,733,806 (+)NCBI
MGSCv371324,706,479 - 24,825,675 (+)RGD
Celera1324,812,851 - 24,964,462 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_178658   ⟹   NP_848773
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,798,589 - 24,889,984 (+)NCBI
GRCm381324,614,606 - 24,706,001 (+)NCBI
MGSCv371324,706,479 - 24,825,675 (+)RGD
Celera1324,812,851 - 24,964,462 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006516587   ⟹   XP_006516650
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,685,369 - 24,917,789 (+)NCBI
GRCm381324,501,531 - 24,733,806 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516588   ⟹   XP_006516651
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,798,245 - 24,917,789 (+)NCBI
GRCm381324,614,234 - 24,733,806 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516589   ⟹   XP_006516652
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,685,517 - 24,917,789 (+)NCBI
GRCm381324,501,530 - 24,733,806 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516590   ⟹   XP_006516653
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,822,843 - 24,917,789 (+)NCBI
GRCm381324,638,847 - 24,733,806 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516591   ⟹   XP_006516654
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,820,242 - 24,917,789 (+)NCBI
GRCm381324,638,667 - 24,733,806 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516592   ⟹   XP_006516655
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,685,372 - 24,917,789 (+)NCBI
GRCm381324,501,531 - 24,733,806 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516594   ⟹   XP_006516657
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,685,513 - 24,889,984 (+)NCBI
GRCm381324,501,524 - 24,706,001 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516595   ⟹   XP_006516658
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,685,514 - 24,889,984 (+)NCBI
GRCm381324,501,526 - 24,706,001 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247202   ⟹   XP_030103062
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,820,242 - 24,917,789 (+)NCBI
GRCm381324,636,259 - 24,733,806 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247203   ⟹   XP_030103063
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,820,242 - 24,889,984 (+)NCBI
GRCm381324,636,259 - 24,706,001 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157913   ⟹   XP_036013806
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,820,242 - 24,917,789 (+)NCBI
RefSeq Acc Id: XM_036157914   ⟹   XP_036013807
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,798,245 - 24,917,789 (+)NCBI
RefSeq Acc Id: XM_036157915   ⟹   XP_036013808
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,685,518 - 24,917,789 (+)NCBI
RefSeq Acc Id: XM_036157916   ⟹   XP_036013809
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,822,843 - 24,917,789 (+)NCBI
RefSeq Acc Id: XM_036157917   ⟹   XP_036013810
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391324,822,839 - 24,889,984 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001073850 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273029 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273030 (Get FASTA)   NCBI Sequence Viewer  
  NP_083955 (Get FASTA)   NCBI Sequence Viewer  
  NP_848773 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516650 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516651 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516652 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516653 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516654 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516655 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516657 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516658 (Get FASTA)   NCBI Sequence Viewer  
  XP_030103062 (Get FASTA)   NCBI Sequence Viewer  
  XP_030103063 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013806 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013807 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013808 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013809 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013810 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH60202 (Get FASTA)   NCBI Sequence Viewer  
  BAB24871 (Get FASTA)   NCBI Sequence Viewer  
  BAC27606 (Get FASTA)   NCBI Sequence Viewer  
  BAC29436 (Get FASTA)   NCBI Sequence Viewer  
  BAC30301 (Get FASTA)   NCBI Sequence Viewer  
  BAC30732 (Get FASTA)   NCBI Sequence Viewer  
  BAC31025 (Get FASTA)   NCBI Sequence Viewer  
  BAC65551 (Get FASTA)   NCBI Sequence Viewer  
  BAE37527 (Get FASTA)   NCBI Sequence Viewer  
  CAI25708 (Get FASTA)   NCBI Sequence Viewer  
  CAI26080 (Get FASTA)   NCBI Sequence Viewer  
  CAO77894 (Get FASTA)   NCBI Sequence Viewer  
  EDL32485 (Get FASTA)   NCBI Sequence Viewer  
  EDL32486 (Get FASTA)   NCBI Sequence Viewer  
  EDL32487 (Get FASTA)   NCBI Sequence Viewer  
  EDL32488 (Get FASTA)   NCBI Sequence Viewer  
  EDL32489 (Get FASTA)   NCBI Sequence Viewer  
  EDL32490 (Get FASTA)   NCBI Sequence Viewer  
  EDL32491 (Get FASTA)   NCBI Sequence Viewer  
  EDL32492 (Get FASTA)   NCBI Sequence Viewer  
  EDL32493 (Get FASTA)   NCBI Sequence Viewer  
  EDL32494 (Get FASTA)   NCBI Sequence Viewer  
  EDL32495 (Get FASTA)   NCBI Sequence Viewer  
  EDL32496 (Get FASTA)   NCBI Sequence Viewer  
  EDL32497 (Get FASTA)   NCBI Sequence Viewer  
  Q80U16 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_848773   ⟸   NM_178658
- Peptide Label: isoform 3
- UniProtKB: Q80U16 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_083955   ⟸   NM_029679
- Peptide Label: isoform 1
- UniProtKB: Q80U16 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001073850   ⟸   NM_001080381
- Peptide Label: isoform 2
- UniProtKB: Q80U16 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001273029   ⟸   NM_001286100
- Peptide Label: isoform 4
- UniProtKB: Q80U16 (UniProtKB/Swiss-Prot),   A6PW28 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273030   ⟸   NM_001286101
- Peptide Label: isoform 5
- UniProtKB: Q80U16 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006516657   ⟸   XM_006516594
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006516658   ⟸   XM_006516595
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006516652   ⟸   XM_006516589
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006516650   ⟸   XM_006516587
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006516655   ⟸   XM_006516592
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006516651   ⟸   XM_006516588
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006516653   ⟸   XM_006516590
- Peptide Label: isoform X5
- UniProtKB: A6PW28 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516654   ⟸   XM_006516591
- Peptide Label: isoform X5
- UniProtKB: A6PW28 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030103062   ⟸   XM_030247202
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030103063   ⟸   XM_030247203
- Peptide Label: isoform X14
RefSeq Acc Id: ENSMUSP00000089286   ⟸   ENSMUST00000091694
RefSeq Acc Id: ENSMUSP00000106013   ⟸   ENSMUST00000110384
RefSeq Acc Id: ENSMUSP00000106012   ⟸   ENSMUST00000110383
RefSeq Acc Id: ENSMUSP00000115689   ⟸   ENSMUST00000132689
RefSeq Acc Id: ENSMUSP00000159186   ⟸   ENSMUST00000238974
RefSeq Acc Id: ENSMUSP00000051342   ⟸   ENSMUST00000058009
RefSeq Acc Id: ENSMUSP00000043663   ⟸   ENSMUST00000038477
RefSeq Acc Id: XP_036013808   ⟸   XM_036157915
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036013807   ⟸   XM_036157914
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036013806   ⟸   XM_036157913
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036013810   ⟸   XM_036157917
- Peptide Label: isoform X12
RefSeq Acc Id: XP_036013809   ⟸   XM_036157916
- Peptide Label: isoform X10
Protein Domains
PL48

Promoters
RGD ID:8679878
Promoter ID:EPDNEW_M17970
Type:single initiation site
Name:Ripor2_3
Description:Mus musculus RHO family interacting cell polarization regulator2 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17973  EPDNEW_M17974  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381324,582,179 - 24,582,239EPDNEW
RGD ID:8679884
Promoter ID:EPDNEW_M17973
Type:initiation region
Name:Ripor2_1
Description:Mus musculus RHO family interacting cell polarization regulator2 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17970  EPDNEW_M17974  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381324,614,627 - 24,614,687EPDNEW
RGD ID:8679886
Promoter ID:EPDNEW_M17974
Type:initiation region
Name:Ripor2_2
Description:Mus musculus RHO family interacting cell polarization regulator2 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17970  EPDNEW_M17973  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381324,638,676 - 24,638,736EPDNEW
RGD ID:6823886
Promoter ID:MM_KWN:13584
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Lung,   Spleen
Transcripts:NM_178658,   OTTMUST00000001207,   OTTMUST00000061984
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361324,706,271 - 24,706,771 (+)MPROMDB
RGD ID:6823931
Promoter ID:MM_KWN:13585
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung,   Spleen
Transcripts:AK049793_C530050E15RIK,   ENSMUST00000058009,   ENSMUST00000102959,   NM_001080381,   OTTMUST00000001209,   UC007PWC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361324,729,241 - 24,730,932 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2444879 AgrOrtholog
Ensembl Genes ENSMUSG00000036006 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000043663 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000051342 UniProtKB/Swiss-Prot
  ENSMUSP00000089286 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000106012 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000106013 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000115689 UniProtKB/TrEMBL
  ENSMUSP00000159186 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000038477 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000058009 UniProtKB/Swiss-Prot
  ENSMUST00000091694 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000110383 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000110384 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000132689 UniProtKB/TrEMBL
  ENSMUST00000238974 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FAM65_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FAM65B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIPOR3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:193385 UniProtKB/Swiss-Prot
MGD MGI:2444879 ENTREZGENE
NCBI Gene 193385 ENTREZGENE
PANTHER PTHR15829 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15829:SF2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PL48 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ripor2 PhenoGen
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A5F8MPY8_MOUSE UniProtKB/TrEMBL
  A6PW28 ENTREZGENE, UniProtKB/TrEMBL
  F2Z3V4_MOUSE UniProtKB/TrEMBL
  Q6PAN3_MOUSE UniProtKB/TrEMBL
  Q80U16 ENTREZGENE
  Q9D9C2_MOUSE UniProtKB/TrEMBL
  RIPR2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary A6PW01 UniProtKB/Swiss-Prot
  A6PW03 UniProtKB/Swiss-Prot
  Q3TQ58 UniProtKB/Swiss-Prot
  Q5SY29 UniProtKB/Swiss-Prot
  Q5SZV4 UniProtKB/Swiss-Prot
  Q5T0J1 UniProtKB/Swiss-Prot
  Q8BIM7 UniProtKB/Swiss-Prot
  Q8BJ19 UniProtKB/Swiss-Prot
  Q8BJ22 UniProtKB/Swiss-Prot
  Q8BJ32 UniProtKB/Swiss-Prot
  Q8BJ54 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-06-06 Ripor2  RHO family interacting cell polarization regulator 2  Fam65b  family with sequence similarity 65, member B  Symbol and/or name change 5135510 APPROVED