Klhdc8b (kelch domain containing 8B) - Rat Genome Database
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Gene: Klhdc8b (kelch domain containing 8B) Mus musculus
Analyze
Symbol: Klhdc8b
Name: kelch domain containing 8B
RGD ID: 1550251
MGI Page MGI
Description: Predicted to be involved in mitotic cytokinetic process; mitotic nuclear division; and nuclear chromosome segregation. Predicted to localize to several cellular components, including cellularization cleavage furrow; intercellular bridge; and midbody. Is expressed in heart. Human ortholog(s) of this gene implicated in Hodgkin's lymphoma. Orthologous to human KLHDC8B (kelch domain containing 8B); INTERACTS WITH 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4931406O17Rik; kelch domain-containing protein 8B
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,324,834 - 108,338,780 (-)NCBIGRCm39mm39
GRCm389108,447,635 - 108,461,581 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,447,636 - 108,461,581 (-)EnsemblGRCm38mm10GRCm38
MGSCv379108,349,970 - 108,363,912 (-)NCBIGRCm37mm9NCBIm37
MGSCv369108,305,742 - 108,319,684 (-)NCBImm8
Celera9108,056,827 - 108,070,762 (-)NCBICelera
Cytogenetic Map9F2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17286962   PMID:18799693  


Genomics

Comparative Map Data
Klhdc8b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,324,834 - 108,338,780 (-)NCBIGRCm39mm39
GRCm389108,447,635 - 108,461,581 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,447,636 - 108,461,581 (-)EnsemblGRCm38mm10GRCm38
MGSCv379108,349,970 - 108,363,912 (-)NCBIGRCm37mm9NCBIm37
MGSCv369108,305,742 - 108,319,684 (-)NCBImm8
Celera9108,056,827 - 108,070,762 (-)NCBICelera
Cytogenetic Map9F2NCBI
KLHDC8B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl349,171,598 - 49,176,486 (+)EnsemblGRCh38hg38GRCh38
GRCh38349,171,120 - 49,176,487 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37349,208,987 - 49,213,919 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,184,072 - 49,188,923 (+)NCBINCBI36hg18NCBI36
Celera349,166,287 - 49,171,188 (+)NCBI
Cytogenetic Map3p21.31NCBI
HuRef349,266,977 - 49,271,878 (+)NCBIHuRef
CHM1_1349,161,789 - 49,166,690 (+)NCBICHM1_1
Klhdc8b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08117,232,047 - 117,236,792 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,231,769 - 117,237,229 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08116,576,621 - 116,581,366 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera8108,442,391 - 108,447,071 (-)NCBICelera
Cytogenetic Map8q32NCBI
Klhdc8b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,158,162 - 1,163,305 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555321,158,888 - 1,162,710 (+)NCBIChiLan1.0ChiLan1.0
KLHDC8B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1350,173,894 - 50,179,759 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl350,174,393 - 50,179,759 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0349,094,203 - 49,099,818 (+)NCBIMhudiblu_PPA_v0panPan3
KLHDC8B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2040,023,411 - 40,026,552 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12040,012,797 - 40,027,888 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Klhdc8b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936529863,052 - 872,067 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLHDC8B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,775,694 - 31,780,484 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,775,339 - 31,780,483 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,005,885 - 35,011,029 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KLHDC8B
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12210,573,720 - 10,578,629 (+)NCBI
ChlSab1.1 Ensembl2210,574,769 - 10,578,674 (+)Ensembl
Klhdc8b
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247303,182,881 - 3,187,714 (+)NCBI

Position Markers
MDB1432  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,447,796 - 108,447,948UniSTSGRCm38
MGSCv379108,350,127 - 108,350,279UniSTSGRCm37
Celera9108,056,984 - 108,057,136UniSTS
Cytogenetic Map9F2UniSTS
Whitehead_YAC9 UniSTS
UniSTS:236247  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,463,250 - 108,463,556UniSTSGRCm38
MGSCv379108,365,581 - 108,365,887UniSTSGRCm37
Celera9108,072,431 - 108,072,737UniSTS
Cytogenetic Map9F2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:285
Count of miRNA genes:223
Interacting mature miRNAs:250
Transcripts:ENSMUST00000035232
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001359428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC161260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA750541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000035232   ⟹   ENSMUSP00000035232
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,447,658 - 108,452,377 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192160
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,452,588 - 108,460,929 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192196
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,454,673 - 108,460,929 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192210
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,454,866 - 108,461,073 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192245
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,447,658 - 108,450,804 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193159
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,451,276 - 108,452,801 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193286   ⟹   ENSMUSP00000142325
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,447,636 - 108,461,581 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193331
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,454,675 - 108,456,950 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193618
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,459,233 - 108,460,928 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193895   ⟹   ENSMUSP00000141453
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,447,973 - 108,461,076 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193911
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,451,255 - 108,452,766 (-)Ensembl
RefSeq Acc Id: ENSMUST00000194559
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,447,658 - 108,452,718 (-)Ensembl
RefSeq Acc Id: ENSMUST00000194633
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,448,268 - 108,450,369 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195435   ⟹   ENSMUSP00000141558
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,447,832 - 108,452,404 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195869
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,458,436 - 108,460,078 (-)Ensembl
RefSeq Acc Id: NM_001359428   ⟹   NP_001346357
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,838 - 108,330,000 (-)NCBI
GRCm389108,447,639 - 108,452,801 (-)NCBI
Sequence:
RefSeq Acc Id: NM_030075   ⟹   NP_084351
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,838 - 108,338,780 (-)NCBI
GRCm389108,447,639 - 108,461,581 (-)NCBI
MGSCv379108,349,970 - 108,363,912 (-)RGD
Celera9108,056,827 - 108,070,762 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006511858   ⟹   XP_006511921
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,328,167 (-)NCBI
GRCm389108,447,635 - 108,450,968 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244716   ⟹   XP_030100576
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
GRCm389108,447,635 - 108,461,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244717   ⟹   XP_030100577
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
GRCm389108,447,636 - 108,461,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244718   ⟹   XP_030100578
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
GRCm389108,447,636 - 108,460,948 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244719   ⟹   XP_030100579
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
GRCm389108,447,636 - 108,461,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244721   ⟹   XP_030100581
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
GRCm389108,447,636 - 108,461,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244723   ⟹   XP_030100583
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
GRCm389108,447,636 - 108,461,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244724   ⟹   XP_030100584
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
GRCm389108,447,636 - 108,461,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244725   ⟹   XP_030100585
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,330,069 (-)NCBI
GRCm389108,447,635 - 108,452,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036155408   ⟹   XP_036011301
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,324,834 - 108,338,396 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_084351   ⟸   NM_030075
- UniProtKB: Q9D2D9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006511921   ⟸   XM_006511858
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_030100576   ⟸   XM_030244716
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100585   ⟸   XM_030244725
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030100584   ⟸   XM_030244724
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100581   ⟸   XM_030244721
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100579   ⟸   XM_030244719
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100583   ⟸   XM_030244723
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100577   ⟸   XM_030244717
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100578   ⟸   XM_030244718
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001346357   ⟸   NM_001359428
RefSeq Acc Id: ENSMUSP00000141453   ⟸   ENSMUST00000193895
RefSeq Acc Id: ENSMUSP00000142325   ⟸   ENSMUST00000193286
RefSeq Acc Id: ENSMUSP00000035232   ⟸   ENSMUST00000035232
RefSeq Acc Id: ENSMUSP00000141558   ⟸   ENSMUST00000195435
RefSeq Acc Id: XP_036011301   ⟸   XM_036155408
- Peptide Label: isoform X1

Promoters
RGD ID:6844721
Promoter ID:MM_KWN:58793
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   MEF_B4
Transcripts:UC009RPN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369108,354,541 - 108,355,041 (-)MPROMDB
RGD ID:6844723
Promoter ID:MM_KWN:58795
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_030075,   NM_030075_KLHDC8B,   UC009RPO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369108,363,256 - 108,364,652 (-)MPROMDB
RGD ID:8670890
Promoter ID:EPDNEW_M13476
Type:multiple initiation site
Name:Klhdc8b_2
Description:Mus musculus kelch domain containing 8B , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13477  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389108,452,391 - 108,452,451EPDNEW
RGD ID:8670892
Promoter ID:EPDNEW_M13477
Type:initiation region
Name:Klhdc8b_1
Description:Mus musculus kelch domain containing 8B , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13476  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389108,452,798 - 108,452,858EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1925517 AgrOrtholog
Ensembl Genes ENSMUSG00000032609 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000035232 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000141453 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000141558 UniProtKB/TrEMBL
  ENSMUSP00000142325 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000035232 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000193286 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000193895 UniProtKB/Swiss-Prot
  ENSMUST00000195435 UniProtKB/TrEMBL
Gene3D-CATH 2.120.10.80 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Gal_Oxase/kelch_b-propeller UniProtKB/TrEMBL
  Kelch-typ_b-propeller UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kelch_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:78267 UniProtKB/Swiss-Prot
MGD MGI:1925517 ENTREZGENE
NCBI Gene 78267 ENTREZGENE
Pfam Kelch_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Klhdc8b PhenoGen
SMART Kelch UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF117281 UniProtKB/Swiss-Prot
  SSF50965 UniProtKB/TrEMBL
UniGene Mm.283194 ENTREZGENE
UniProt A0A0A6YWH8_MOUSE UniProtKB/TrEMBL
  KLD8B_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE