Abtb1 (ankyrin repeat and BTB (POZ) domain containing 1) - Rat Genome Database
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Gene: Abtb1 (ankyrin repeat and BTB (POZ) domain containing 1) Mus musculus
Analyze
Symbol: Abtb1
Name: ankyrin repeat and BTB (POZ) domain containing 1
RGD ID: 1550163
MGI Page MGI
Description: Predicted to have translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to localize to several cellular components, including cytosol; nucleolus; and ubiquitin ligase complex. Is expressed in several structures, including central nervous system; ganglia; genitourinary system; sensory organ; and skeleton. Orthologous to human ABTB1 (ankyrin repeat and BTB domain containing 1); INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI847549; ankyrin repeat and BTB/POZ domain-containing protein 1; BC003234; BP; BPOZ; EF1A; EF1ABP; mFLJ00331 protein; MGC7237
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39688,812,896 - 88,819,356 (-)NCBIGRCm39mm39
GRCm38688,835,914 - 88,842,375 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl688,835,914 - 88,841,984 (-)EnsemblGRCm38mm10GRCm38
MGSCv37688,785,908 - 88,791,929 (-)NCBIGRCm37mm9NCBIm37
MGSCv36688,801,558 - 88,808,095 (-)NCBImm8
Celera690,774,113 - 90,780,134 (-)NCBICelera
Cytogenetic Map6D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11494141   PMID:12477932   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18287559  
PMID:20059953   PMID:20211142   PMID:21267068   PMID:21873635   PMID:24952961  


Genomics

Comparative Map Data
Abtb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39688,812,896 - 88,819,356 (-)NCBIGRCm39mm39
GRCm38688,835,914 - 88,842,375 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl688,835,914 - 88,841,984 (-)EnsemblGRCm38mm10GRCm38
MGSCv37688,785,908 - 88,791,929 (-)NCBIGRCm37mm9NCBIm37
MGSCv36688,801,558 - 88,808,095 (-)NCBImm8
Celera690,774,113 - 90,780,134 (-)NCBICelera
Cytogenetic Map6D1NCBI
ABTB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3127,672,935 - 127,680,926 (+)EnsemblGRCh38hg38GRCh38
GRCh383127,672,928 - 127,680,926 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh373127,391,795 - 127,399,769 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh373127,391,781 - 127,399,769 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363128,874,471 - 128,882,453 (+)NCBINCBI36hg18NCBI36
Build 343128,874,478 - 128,882,460NCBI
Celera3125,818,638 - 125,826,632 (+)NCBI
Cytogenetic Map3q21.3NCBI
HuRef3124,772,545 - 124,780,539 (+)NCBIHuRef
CHM1_13127,355,102 - 127,363,090 (+)NCBICHM1_1
Abtb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24121,299,302 - 121,305,667 (-)NCBI
Rnor_6.0 Ensembl4120,778,580 - 120,784,807 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04120,778,580 - 120,784,807 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04186,019,181 - 186,025,416 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44122,930,404 - 122,936,631 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14123,174,884 - 123,181,112 (-)NCBI
Celera4110,252,518 - 110,258,745 (-)NCBICelera
Cytogenetic Map4q34NCBI
Abtb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542915,964,908 - 15,968,525 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542915,964,584 - 15,968,604 (-)NCBIChiLan1.0ChiLan1.0
ABTB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13132,024,253 - 132,032,242 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3132,024,193 - 132,032,242 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03124,717,600 - 124,725,589 (+)NCBIMhudiblu_PPA_v0panPan3
ABTB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl201,751,718 - 1,760,419 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1201,753,031 - 1,760,424 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Abtb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936798721,539 - 734,142 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABTB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1372,573,332 - 72,579,192 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11372,568,130 - 72,579,688 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21380,091,280 - 80,097,169 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABTB1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12253,362,464 - 53,370,526 (-)NCBI
ChlSab1.1 Ensembl2253,362,918 - 53,370,462 (-)Ensembl
Abtb1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462497477,137 - 81,198 (+)NCBI

Position Markers
Abtb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
cM Map6 UniSTS
AI847549  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38688,836,053 - 88,836,189UniSTSGRCm38
MGSCv37688,786,047 - 88,786,183UniSTSGRCm37
Celera690,774,252 - 90,774,388UniSTS
Cytogenetic Map6D1UniSTS
Whitehead/MRC_RH6914.69UniSTS
Abtb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:229
Count of miRNA genes:193
Interacting mature miRNAs:209
Transcripts:ENSMUST00000032169
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001362152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_155424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB053477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI117801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI847549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB850379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY201769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO804154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000032169   ⟹   ENSMUSP00000032169
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,835,914 - 88,841,900 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203120   ⟹   ENSMUSP00000145338
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,836,423 - 88,838,866 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203137   ⟹   ENSMUSP00000144757
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,835,924 - 88,841,894 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203272   ⟹   ENSMUSP00000144802
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,836,148 - 88,841,984 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203460
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,839,018 - 88,841,830 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203514
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,838,657 - 88,839,589 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203864   ⟹   ENSMUSP00000145252
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,838,845 - 88,841,882 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204327   ⟹   ENSMUSP00000145110
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,836,685 - 88,839,080 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204458   ⟹   ENSMUSP00000145144
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,838,454 - 88,841,866 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204560
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,836,278 - 88,838,715 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204932   ⟹   ENSMUSP00000144922
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,839,665 - 88,841,935 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205082   ⟹   ENSMUSP00000144915
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,838,115 - 88,839,155 (-)Ensembl
RefSeq Acc Id: NM_001362152   ⟹   NP_001349081
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,818,917 (-)NCBI
GRCm38688,835,914 - 88,841,935 (-)NCBI
Sequence:
RefSeq Acc Id: NM_030251   ⟹   NP_084527
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,818,917 (-)NCBI
GRCm38688,835,914 - 88,841,935 (-)NCBI
MGSCv37688,785,908 - 88,791,929 (-)RGD
Celera690,774,113 - 90,780,134 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_155424
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,818,917 (-)NCBI
GRCm38688,835,914 - 88,841,935 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006506791   ⟹   XP_006506854
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,819,356 (-)NCBI
GRCm38688,835,914 - 88,842,375 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006506792   ⟹   XP_006506855
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,819,093 (-)NCBI
GRCm38688,835,914 - 88,842,115 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006506793   ⟹   XP_006506856
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,818,884 (-)NCBI
GRCm38688,835,914 - 88,841,902 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255680   ⟹   XP_030111540
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,819,348 (-)NCBI
GRCm38688,835,914 - 88,842,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255681   ⟹   XP_030111541
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,819,348 (-)NCBI
GRCm38688,835,914 - 88,842,368 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003956266
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,812,896 - 88,819,094 (-)NCBI
GRCm38688,836,438 - 88,842,116 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_084527   ⟸   NM_030251
- Peptide Label: isoform 1
- UniProtKB: Q99LJ2 (UniProtKB/Swiss-Prot),   A0A0R4J0A1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506854   ⟸   XM_006506791
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006506855   ⟸   XM_006506792
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006506856   ⟸   XM_006506793
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030111541   ⟸   XM_030255681
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030111540   ⟸   XM_030255680
- Peptide Label: isoform X3
RefSeq Acc Id: NP_001349081   ⟸   NM_001362152
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000145110   ⟸   ENSMUST00000204327
RefSeq Acc Id: ENSMUSP00000145252   ⟸   ENSMUST00000203864
RefSeq Acc Id: ENSMUSP00000144802   ⟸   ENSMUST00000203272
RefSeq Acc Id: ENSMUSP00000144757   ⟸   ENSMUST00000203137
RefSeq Acc Id: ENSMUSP00000145338   ⟸   ENSMUST00000203120
RefSeq Acc Id: ENSMUSP00000032169   ⟸   ENSMUST00000032169
RefSeq Acc Id: ENSMUSP00000144915   ⟸   ENSMUST00000205082
RefSeq Acc Id: ENSMUSP00000144922   ⟸   ENSMUST00000204932
RefSeq Acc Id: ENSMUSP00000145144   ⟸   ENSMUST00000204458
Protein Domains
ANK_REP_REGION   BTB

Promoters
RGD ID:6839010
Promoter ID:MM_KWN:46828
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000095728,   NM_030251,   UC009CVT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36688,791,716 - 88,792,712 (-)MPROMDB
RGD ID:6890382
Promoter ID:EPDNEW_M8642
Type:initiation region
Name:Abtb1_1
Description:Mus musculus ankyrin repeat and BTB domain containing 1 , transcriptvariant 3, non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38688,841,872 - 88,841,932EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1933148 AgrOrtholog
Ensembl Genes ENSMUSG00000030083 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032169 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000144757 UniProtKB/TrEMBL
  ENSMUSP00000144802 UniProtKB/TrEMBL
  ENSMUSP00000144915 UniProtKB/TrEMBL
  ENSMUSP00000144922 UniProtKB/TrEMBL
  ENSMUSP00000145110 UniProtKB/TrEMBL
  ENSMUSP00000145144 UniProtKB/TrEMBL
  ENSMUSP00000145252 UniProtKB/TrEMBL
  ENSMUSP00000145338 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032169 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000203120 UniProtKB/TrEMBL
  ENSMUST00000203137 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000203272 UniProtKB/TrEMBL
  ENSMUST00000203864 UniProtKB/TrEMBL
  ENSMUST00000204327 UniProtKB/TrEMBL
  ENSMUST00000204458 UniProtKB/TrEMBL
  ENSMUST00000204932 UniProtKB/TrEMBL
  ENSMUST00000205082 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:80283 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1933148 ENTREZGENE
NCBI Gene 80283 ENTREZGENE
Pfam Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Abtb1 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SUP1_MOUSE UniProtKB/TrEMBL
  A0A0N4SV19_MOUSE UniProtKB/TrEMBL
  A0A0N4SVH8_MOUSE UniProtKB/TrEMBL
  A0A0N4SVK7_MOUSE UniProtKB/TrEMBL
  A0A0N4SVV0_MOUSE UniProtKB/TrEMBL
  A0A0N4SW21_MOUSE UniProtKB/TrEMBL
  A0A0R4J0A1 ENTREZGENE, UniProtKB/TrEMBL
  ABTB1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q8C2K7 UniProtKB/Swiss-Prot
  Q91XU4 UniProtKB/Swiss-Prot