Cyth3 (cytohesin 3) - Rat Genome Database

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Gene: Cyth3 (cytohesin 3) Mus musculus
Analyze
Symbol: Cyth3
Name: cytohesin 3
RGD ID: 1550153
MGI Page MGI
Description: Enables phosphatidylinositol-3,4,5-trisphosphate binding activity. Acts upstream of or within establishment of epithelial cell polarity and positive regulation of cell adhesion. Located in several cellular components, including adherens junction; bicellular tight junction; and ruffle. Is expressed in brain; neocortex; and telencephalon. Orthologous to human CYTH3 (cytohesin 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI648983; ARF nucleotide-binding site opener 3; ARNO3; CLM3; cytohesin-3; general receptor of phosphoinositides 1; Gr; Grp1; KIAA4241; mSec7-3; PH, SEC7 and coiled-coil domain-containing protein 3; pleckstrin homology, Sec7 and coiled-coil domains 3; Psc; Pscd3; SEC7 homolog C
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395143,608,202 - 143,696,005 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5143,608,202 - 143,696,005 (+)EnsemblGRCm39 Ensembl
GRCm385143,622,447 - 143,710,250 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5143,622,447 - 143,710,250 (+)EnsemblGRCm38mm10GRCm38
MGSCv375144,383,316 - 144,471,119 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365143,878,153 - 143,965,865 (+)NCBIMGSCv36mm8
Celera5140,664,821 - 140,752,813 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map582.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9072969   PMID:9744817   PMID:10349636   PMID:10512203   PMID:10605025   PMID:10652516   PMID:10828067   PMID:11001876   PMID:11042159   PMID:11076861   PMID:11445584  
PMID:12477932   PMID:15142957   PMID:15489334   PMID:15782199   PMID:15840001   PMID:16141072   PMID:16141073   PMID:18042453   PMID:18799693   PMID:20080746   PMID:21267068   PMID:21677750  
PMID:26239146   PMID:26977543   PMID:27507650   PMID:28671696   PMID:29276036   PMID:30674481   PMID:30837656   PMID:31601460  


Genomics

Comparative Map Data
Cyth3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395143,608,202 - 143,696,005 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5143,608,202 - 143,696,005 (+)EnsemblGRCm39 Ensembl
GRCm385143,622,447 - 143,710,250 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5143,622,447 - 143,710,250 (+)EnsemblGRCm38mm10GRCm38
MGSCv375144,383,316 - 144,471,119 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365143,878,153 - 143,965,865 (+)NCBIMGSCv36mm8
Celera5140,664,821 - 140,752,813 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map582.36NCBI
CYTH3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3876,161,779 - 6,272,624 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl76,161,776 - 6,272,644 (-)EnsemblGRCh38hg38GRCh38
GRCh3776,201,410 - 6,312,255 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3676,167,935 - 6,278,767 (-)NCBINCBI36Build 36hg18NCBI36
Build 3475,974,652 - 6,085,482NCBI
Celera76,422,869 - 6,533,702 (+)NCBICelera
Cytogenetic Map7p22.1NCBI
HuRef76,073,515 - 6,102,268 (-)NCBIHuRef
CHM1_176,201,010 - 6,311,828 (-)NCBICHM1_1
T2T-CHM13v2.076,281,155 - 6,392,015 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v276,247,766 - 6,358,597 (-)NCBI
Cyth3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21210,840,137 - 10,933,792 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1210,840,157 - 10,933,812 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,647,392 - 11,740,819 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01212,270,686 - 12,364,108 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01211,294,673 - 11,388,443 (-)NCBIRnor_WKY
Rnor_6.01212,877,559 - 12,907,771 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,877,559 - 12,945,192 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01214,921,905 - 14,953,442 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41211,169,420 - 11,198,144 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11211,201,327 - 11,228,073 (-)NCBI
Celera1212,636,946 - 12,730,083 (-)NCBICelera
Cytogenetic Map12p11NCBI
Cyth3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495546013,439,634 - 13,492,767 (+)NCBIChiLan1.0ChiLan1.0
CYTH3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.176,357,978 - 6,386,725 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl76,357,978 - 6,386,756 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v077,170,064 - 7,283,000 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
CYTH3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1611,554,922 - 11,653,201 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl611,556,511 - 11,645,086 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha613,180,741 - 13,285,865 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0611,555,477 - 11,660,618 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl611,555,477 - 11,645,797 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1611,431,973 - 11,537,027 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0611,411,206 - 11,516,184 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0611,637,860 - 11,743,271 (-)NCBIUU_Cfam_GSD_1.0
Cyth3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344139,636,669 - 139,727,627 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936750283,583 - 308,604 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936750283,994 - 308,591 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CYTH3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl34,900,570 - 5,002,194 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.134,900,575 - 5,002,201 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CYTH3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12815,366,238 - 15,479,781 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2815,369,402 - 15,479,540 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666102604,064 - 717,566 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cyth3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474031,071,193 - 31,191,264 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474031,071,169 - 31,191,318 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1673
Count of miRNA genes:715
Interacting mature miRNAs:911
Transcripts:ENSMUST00000110727, ENSMUST00000116456, ENSMUST00000131436, ENSMUST00000177196, ENSMUST00000177281
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115156883149157015Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119945037149347326Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121555236151758149Mouse
1302079Lbw3_mlupus NZB x NZW 3 (mouse)Not determined5124700335151758149Mouse
1301363Pbwg13_mpostnatal body weight growth 13 (mouse)Not determined5125133457151758149Mouse
4141218Ath24_matherosclerosis 24 (mouse)Not determined129520084151758149Mouse
12880406Jcdq2_mjoint cartilage degeneration QTL 2 (mouse)5129787831151758149Mouse
11049557Lmr26_mleishmaniasis resistance 26 (mouse)5133925558151758149Mouse
13504735Ifvrq7_minfluenza virus resistance QTL 7 (mouse)5139509801151658149Mouse
13504737Ifvrq5_minfluenza virus resistance QTL 5 (mouse)5139509801151658149Mouse
13504734Ifvrq4_minfluenza virus resistance QTL 4 (mouse)5139985755151658149Mouse

Markers in Region
AI648983  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385143,709,761 - 143,709,892UniSTSGRCm38
MGSCv375144,470,630 - 144,470,761UniSTSGRCm37
Celera5140,752,324 - 140,752,455UniSTS
Cytogenetic Map5G2UniSTS
cM Map582.0UniSTS
Whitehead/MRC_RH51709.63UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001163548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB013470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC136746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF001871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF084221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI846077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK016645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY271755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000110727   ⟹   ENSMUSP00000106355
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5143,636,996 - 143,694,011 (+)Ensembl
GRCm38.p6 Ensembl5143,651,241 - 143,708,256 (+)Ensembl
RefSeq Acc Id: ENSMUST00000116456   ⟹   ENSMUSP00000112157
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5143,608,202 - 143,696,005 (+)Ensembl
GRCm38.p6 Ensembl5143,622,447 - 143,710,250 (+)Ensembl
RefSeq Acc Id: ENSMUST00000131436   ⟹   ENSMUSP00000118290
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5143,619,821 - 143,678,407 (+)Ensembl
GRCm38.p6 Ensembl5143,634,066 - 143,692,652 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177196   ⟹   ENSMUSP00000135548
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5143,608,289 - 143,672,281 (+)Ensembl
GRCm38.p6 Ensembl5143,622,534 - 143,686,526 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177281   ⟹   ENSMUSP00000135287
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5143,622,106 - 143,678,309 (+)Ensembl
GRCm38.p6 Ensembl5143,636,351 - 143,692,554 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198355
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5143,608,256 - 143,613,183 (+)Ensembl
GRCm38.p6 Ensembl5143,622,501 - 143,627,428 (+)Ensembl
RefSeq Acc Id: NM_001163548   ⟹   NP_001157020
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395143,636,996 - 143,696,005 (+)NCBI
GRCm385143,651,241 - 143,710,250 (+)NCBI
MGSCv375144,383,316 - 144,471,119 (+)RGD
Celera5140,664,821 - 140,752,813 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_011182   ⟹   NP_035312
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395143,608,202 - 143,696,005 (+)NCBI
GRCm385143,622,447 - 143,710,250 (+)ENTREZGENE
MGSCv375144,383,316 - 144,471,119 (+)RGD
Celera5140,664,821 - 140,752,813 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017320729   ⟹   XP_017176218
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395143,608,210 - 143,696,005 (+)NCBI
GRCm385143,622,453 - 143,710,250 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254209   ⟹   XP_030110069
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395143,636,992 - 143,696,005 (+)NCBI
GRCm385143,651,237 - 143,710,250 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164909   ⟹   XP_036020802
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395143,608,207 - 143,696,005 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035312   ⟸   NM_011182
- Peptide Label: isoform 1
- UniProtKB: Q8CI93 (UniProtKB/Swiss-Prot),   O08967 (UniProtKB/Swiss-Prot),   Q3TXK1 (UniProtKB/TrEMBL),   A0A8C6IDZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157020   ⟸   NM_001163548
- Peptide Label: isoform 2
- UniProtKB: G5E8Q4 (UniProtKB/TrEMBL),   Q3TXK1 (UniProtKB/TrEMBL),   A0A6P7R5Y6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176218   ⟸   XM_017320729
- Peptide Label: isoform X2
- UniProtKB: G5E8Q4 (UniProtKB/TrEMBL),   A0A6P7R5Y6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030110069   ⟸   XM_030254209
- Peptide Label: isoform X2
- UniProtKB: A0A6P7R5Y6 (UniProtKB/TrEMBL),   G5E8Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000106355   ⟸   ENSMUST00000110727
RefSeq Acc Id: ENSMUSP00000135548   ⟸   ENSMUST00000177196
RefSeq Acc Id: ENSMUSP00000135287   ⟸   ENSMUST00000177281
RefSeq Acc Id: ENSMUSP00000118290   ⟸   ENSMUST00000131436
RefSeq Acc Id: ENSMUSP00000112157   ⟸   ENSMUST00000116456
RefSeq Acc Id: XP_036020802   ⟸   XM_036164909
- Peptide Label: isoform X1
Protein Domains
PH   SEC7

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O08967-F1-model_v2 AlphaFold O08967 1-399 view protein structure

Promoters
RGD ID:6888686
Promoter ID:EPDNEW_M7794
Type:initiation region
Name:Cyth3_1
Description:Mus musculus cytohesin 3 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385143,622,499 - 143,622,559EPDNEW
RGD ID:6837333
Promoter ID:MM_KWN:44758
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000056846
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365144,383,126 - 144,383,626 (+)MPROMDB
RGD ID:6837332
Promoter ID:MM_KWN:44759
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000056848
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365144,393,966 - 144,394,577 (+)MPROMDB
RGD ID:6837331
Promoter ID:MM_KWN:44760
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:NM_001163548
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365144,412,016 - 144,412,516 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1335107 AgrOrtholog
Ensembl Genes ENSMUSG00000018001 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000106355 ENTREZGENE
  ENSMUSP00000106355.2 UniProtKB/TrEMBL
  ENSMUSP00000112157 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000118290.2 UniProtKB/TrEMBL
  ENSMUSP00000135287.2 UniProtKB/TrEMBL
  ENSMUSP00000135548.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000110727 ENTREZGENE
  ENSMUST00000110727.2 UniProtKB/TrEMBL
  ENSMUST00000116456 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000131436.8 UniProtKB/TrEMBL
  ENSMUST00000177196.8 UniProtKB/TrEMBL
  ENSMUST00000177281.8 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1000.11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19159 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1335107 ENTREZGENE
NCBI Gene 19159 ENTREZGENE
Pfam PF00169 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cyth3 PhenoGen
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SEC7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Sec7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48425 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JDC7_MOUSE UniProtKB/TrEMBL
  A0A6P7R5Y6 ENTREZGENE
  A0A8C6IDZ9 ENTREZGENE
  CYH3_MOUSE UniProtKB/Swiss-Prot
  D3YXU3_MOUSE UniProtKB/TrEMBL
  G5E8Q4 ENTREZGENE, UniProtKB/TrEMBL
  H3BK81_MOUSE UniProtKB/TrEMBL
  O08967 ENTREZGENE
  Q3TGW1_MOUSE UniProtKB/TrEMBL
  Q3TXK1 ENTREZGENE, UniProtKB/TrEMBL
  Q5DTF5_MOUSE UniProtKB/TrEMBL
  Q8CBE4_MOUSE UniProtKB/TrEMBL
  Q8CI93 ENTREZGENE
  Q922J4_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q8CI93 UniProtKB/Swiss-Prot