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Gene: Pcgf1 (polycomb group ring finger 1) Rattus norvegicus
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Symbol: Pcgf1
Name: polycomb group ring finger 1
Description: Predicted to have promoter-specific chromatin binding activity and protein C-terminus binding activity. Involved in aging. Predicted to localize to the PRC1 complex and nucleoplasm. Orthologous to human PCGF1 (polycomb group ring finger 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,4-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: nervous system polycomb 1; nervous system Polycomb-1; Nspc1; polycomb group RING finger protein 1
Orthologs:
Homo sapiens (human) : PCGF1 (polycomb group ring finger 1)  HGNC  Alliance
Mus musculus (house mouse) : Pcgf1 (polycomb group ring finger 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcgf1 (polycomb group ring finger 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PCGF1 (polycomb group ring finger 1)
Canis lupus familiaris (dog) : PCGF1 (polycomb group ring finger 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcgf1 (polycomb group ring finger 1)
Sus scrofa (pig) : PCGF1 (polycomb group ring finger 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04113,911,129 - 113,913,718 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04178,596,101 - 178,598,690 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,290,410 - 117,292,999 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4104,578,940 - 104,581,529 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pcgf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1549782
Created: 2005-09-15
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.