Gene: Lypd1 (Ly6/Plaur domain containing 1) Rattus norvegicus
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Symbol: Lypd1
Name: Ly6/Plaur domain containing 1
Description: ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); acetylcholine receptor inhibitor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral fear response (ortholog); negative regulation of protein localization to plasma membrane (ortholog); FOUND IN membrane (ortholog); INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil; 7,12-dimethyltetraphene
AGR Description: Predicted to have acetylcholine receptor binding activity and acetylcholine receptor inhibitor activity; predicted to be involved in several processes, including acetylcholine receptor signaling pathway, behavioral fear response, and cholinergic synaptic transmission; predicted to localize to the membrane; orthologous to human LYPD1 (LY6/PLAUR domain containing 1).
Merged Description: Predicted to have acetylcholine receptor binding activity and acetylcholine receptor inhibitor activity; predicted to be involved in several processes, including acetylcholine receptor signaling pathway, behavioral fear response, and cholinergic synaptic transmission; predicted to localize to the membrane; orthologous to human LYPD1 (LY6/PLAUR domain containing 1); INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil; 7,12-dimethyltetraphene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ly6/PLAUR domain-containing protein 1; Lypdc1; MGC95169
Orthologs:
Homo sapiens (human) : LYPD1 (LY6/PLAUR domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Lypd1 (Ly6/Plaur domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lypd1 (LY6/PLAUR domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LYPD1 (LY6/PLAUR domain containing 1)
Canis lupus familiaris (dog) : LYPD1 (LY6/PLAUR domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lypd1 (LY6/PLAUR domain containing 1)
Sus scrofa (pig) : LYPD1 (LY6/PLAUR domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01342,219,884 - 42,263,024 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01347,327,522 - 47,368,232 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41338,399,429 - 38,441,498 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1337,122,178 - 37,163,486 (-)NCBICelera
Cytogenetic Map13q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Lypd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1549754
Created: 2005-09-15
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.