Apool (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | X | 81,569,960 - 81,635,906 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 77,377,723 - 77,443,672 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 77,377,781 - 77,443,900 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 79,035,091 - 79,101,043 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 82,466,054 - 82,531,979 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 80,054,183 - 80,120,122 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 83,678,269 - 83,750,550 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 83,678,339 - 83,750,549 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 83,639,368 - 83,708,627 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 100,911,059 - 100,979,133 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 78,677,758 - 78,743,289 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q31 | NCBI | | | | |
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APOOL (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 85,003,877 - 85,093,315 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 85,003,877 - 85,093,315 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 84,258,883 - 84,348,321 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 84,145,561 - 84,231,643 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 84,065,049 - 84,148,918 | NCBI | | | | | Celera | X | 84,498,355 - 84,587,725 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q21.1 | NCBI | | | | | HuRef | X | 77,832,958 - 77,921,872 (+) | NCBI | | HuRef | | | CHM1_1 | X | 84,152,919 - 84,242,042 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 83,432,345 - 83,522,274 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Apool (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | X | 111,221,049 - 111,282,452 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 111,221,031 - 111,282,452 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 112,311,352 - 112,372,755 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 112,311,334 - 112,372,755 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 109,425,017 - 109,486,039 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 108,428,352 - 108,489,374 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 98,952,746 - 99,013,937 (+) | NCBI | | Celera | | | Cytogenetic Map | X | E1 | NCBI | | | | | cM Map | X | 48.76 | NCBI | | | | |
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Apool (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955529 | 3,849,256 - 3,929,648 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955529 | 3,849,326 - 3,929,588 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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APOOL (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | X | 84,482,909 - 84,572,125 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 84,486,526 - 84,575,732 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 74,075,468 - 74,159,315 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 84,186,044 - 84,270,217 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 84,186,060 - 84,334,662 (+) | Ensembl | panpan1.1 | | panPan2 | |
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APOOL (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | X | 65,850,365 - 65,953,013 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 65,850,440 - 65,952,649 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 56,606,833 - 56,709,451 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 67,179,177 - 67,281,976 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 67,179,120 - 67,281,974 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 64,828,761 - 64,931,623 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 66,461,262 - 66,564,007 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 66,057,721 - 66,160,379 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Apool (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | X | 59,469,822 - 59,537,982 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936547 | 5,790,283 - 5,860,198 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936547 | 5,790,287 - 5,858,054 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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APOOL (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | X | 68,281,869 - 68,355,006 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 68,281,781 - 68,355,009 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 78,031,543 - 78,104,742 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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APOOL (Chlorocebus sabaeus - green monkey) |
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Apool (Heterocephalus glaber - naked mole-rat) |
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