Mir679 (microRNA mir-679) - Rat Genome Database
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Gene: Mir679 (microRNA mir-679) Rattus norvegicus
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Symbol: Mir679
Name: microRNA mir-679
RGD ID: 15039315
Description: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Type: ncrna
Also known as: rno-mir-679
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Cytogenetic Map6 NCBI


References
Additional References at PubMed
PMID:16381832   PMID:22605339   PMID:22908386  


Genomics

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:4600
Count of gene targets:3607
Count of transcripts:3800
Interacting mature miRNAs:rno-miR-679
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
miRBase MI0021857 ENTREZGENE
NCBI Gene Mir679 ENTREZGENE
PhenoGen Mir679 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-27 Mir679  microRNA mir-679      Symbol and Name status set to provisional 70820 PROVISIONAL