PCDHA6 (protocadherin alpha 6) - Rat Genome Database

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Gene: PCDHA6 (protocadherin alpha 6) Canis lupus familiaris
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Symbol: PCDHA6
Name: protocadherin alpha 6
RGD ID: 15036868
Description: ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog)
Type: protein-coding
Previously known as: protocadherin alpha-6
RGD Orthologs
Human
Mouse
Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position: No map positions available.


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (ISO)

References

Genomics

Comparative Map Data
PCDHA6
(Canis lupus familiaris - dog)		 No map positions available.
PCDHA6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385140,827,960 - 141,012,347 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5140,827,958 - 141,012,347 (+)EnsemblGRCh38hg38GRCh38
GRCh375140,207,545 - 140,391,932 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,187,834 - 140,372,113 (+)NCBINCBI36Build 36hg18NCBI36
Build 345140,187,833 - 140,372,113NCBI
Celera5136,284,453 - 136,468,708 (+)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5135,352,390 - 135,536,628 (+)NCBIHuRef
CHM1_15139,640,843 - 139,825,092 (+)NCBICHM1_1
T2T-CHM13v2.05141,353,294 - 141,537,634 (+)NCBIT2T-CHM13v2.0
Pcdha6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391837,100,678 - 37,321,950 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1837,100,684 - 37,320,710 (+)EnsemblGRCm39 Ensembl
GRCm381836,967,625 - 37,188,897 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1836,967,631 - 37,187,657 (+)EnsemblGRCm38mm10GRCm38
MGSCv371837,127,410 - 37,347,311 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361837,093,605 - 37,313,631 (+)NCBIMGSCv36mm8
Celera1837,414,533 - 37,416,924 (+)NCBICelera
Cytogenetic Map18B2- B3NCBI
cM Map1819.46NCBI
Pcdha6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl1828,581,225 - 28,846,211 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01829,987,206 - 30,215,896 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1829,987,206 - 30,215,897 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01829,684,456 - 29,924,443 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41829,697,876 - 29,928,030 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11829,724,521 - 29,954,676 (+)NCBI
Celera1828,326,039 - 28,552,754 (+)NCBICelera
Cytogenetic Map18p11NCBI


Expression


Sequence

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
NCBI Gene PCDHA6 ENTREZGENE