ENSRNOG00000069624 (null) - Rat Genome Database

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Gene: ENSRNOG00000069624 (null) Rattus norvegicus
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Symbol: ENSRNOG00000069624
Name:
RGD ID: 150343795
Description: Predicted to enable RNA stem-loop binding activity. Predicted to be involved in DNA integration and RNA-templated DNA biosynthetic process.
Type: protein_coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl4147,700,824 - 147,706,682 (-)EnsemblmRatBN7.2 Ensembl
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSRNOT00000095636   ⟹   ENSRNOP00000079970
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4147,700,824 - 147,706,682 (-)Ensembl
Protein Sequences
Ensembl Protein ENSRNOP00000079970.1
Ensembl Acc Id: ENSRNOP00000079970   ⟸   ENSRNOT00000095636
Protein Domains
Integrase catalytic   Integrase-type   Reverse transcriptase   RNase H type-1

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000069624 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000095636.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.200 UniProtKB/TrEMBL
  3.30.420.10 UniProtKB/TrEMBL
  3.30.70.270 UniProtKB/TrEMBL
  HIV Type 1 Reverse Transcriptase, subunit A, domain 1 UniProtKB/TrEMBL
InterPro DNA/RNA_pol_sf UniProtKB/TrEMBL
  Integrase-like_N UniProtKB/TrEMBL
  Integrase_cat-core UniProtKB/TrEMBL
  Integrase_Zn-bd_dom_N UniProtKB/TrEMBL
  Rev_trsase/Diguanyl_cyclase UniProtKB/TrEMBL
  RNaseH-like_sf UniProtKB/TrEMBL
  RNaseH_domain UniProtKB/TrEMBL
  RNaseH_sf UniProtKB/TrEMBL
  RT_dom UniProtKB/TrEMBL
  RVT_thumb UniProtKB/TrEMBL
PANTHER ENDOGENOUS RETROVIRUS GROUP K MEMBER POL PROTEIN UniProtKB/TrEMBL
  INTEGRASE-RELATED UniProtKB/TrEMBL
Pfam Integrase_Zn UniProtKB/TrEMBL
  RNase_H UniProtKB/TrEMBL
  rve UniProtKB/TrEMBL
  RVT_1 UniProtKB/TrEMBL
  RVT_thumb UniProtKB/TrEMBL
PhenoGen ENSRNOG00000069624 PhenoGen
PROSITE INTEGRASE UniProtKB/TrEMBL
  RNASE_H UniProtKB/TrEMBL
  RT_POL UniProtKB/TrEMBL
  ZF_INTEGRASE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000069624 RatGTEx
Superfamily-SCOP SSF46919 UniProtKB/TrEMBL
  SSF53098 UniProtKB/TrEMBL
  SSF56672 UniProtKB/TrEMBL
UniProt A0A8I5ZP49_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-08-31 ENSRNOG00000069624        Symbol and Name status set to provisional 45752 PROVISIONAL