AC141220.4 (null) - Rat Genome Database
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Gene: AC141220.4 (null) Rattus norvegicus
Analyze
Symbol: AC141220.4
Name:
RGD ID: 15014555
Description: ENCODES a protein that exhibits oxoglutarate dehydrogenase (succinyl-transferring) activity (inferred); thiamine pyrophosphate binding (inferred); INVOLVED IN tricarboxylic acid cycle (inferred)
Type: protein-coding
Latest Assembly: Rnor_6.0 Ensembl - RGSC Genome Assembly v6.0 Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl1776,306,649 - 76,374,507 (+)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

circulatory system endocrine system exocrine system hepatobiliary system nervous system renal system reproductive system
High
Medium
Low 18 2 7
Below cutoff 26 12 12 12 45 22 23

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000092510   ⟹   ENSRNOP00000075872
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1776,306,649 - 76,374,507 (+)Ensembl
Protein Sequences
Reference Sequences
RefSeq Acc Id: ENSRNOP00000075872   ⟸   ENSRNOT00000092510
Protein Domains
Transket_pyr

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000062048 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000075872 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000092510 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.11610 UniProtKB/TrEMBL
InterPro 2oxoglutarate_DH_E1 UniProtKB/TrEMBL
  DH_E1 UniProtKB/TrEMBL
  KGD_C UniProtKB/TrEMBL
  KGD_C_sf UniProtKB/TrEMBL
  THDP-binding UniProtKB/TrEMBL
  Transketolase-like_Pyr-bd UniProtKB/TrEMBL
PANTHER PTHR23152 UniProtKB/TrEMBL
Pfam E1_dh UniProtKB/TrEMBL
  OxoGdeHyase_C UniProtKB/TrEMBL
  Transket_pyr UniProtKB/TrEMBL
PhenoGen AC141220.4 PhenoGen
PIRSF Oxoglu_dh_E1 UniProtKB/TrEMBL
SMART Transket_pyr UniProtKB/TrEMBL
Superfamily-SCOP SSF52518 UniProtKB/TrEMBL
TIGRFAMs 2oxo_dh_E1 UniProtKB/TrEMBL
UniProt A0A0U1RRZ4_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AC141220.4        Symbol and Name status set to provisional 45752 PROVISIONAL