AABR07028668.1 (null) - Rat Genome Database

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Gene: AABR07028668.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07028668.1
Name:
RGD ID: 15013306
Description: ENCODES a protein that exhibits protein-transporting ATPase activity (inferred); FOUND IN integral component of membrane (inferred)
Type: protein-coding
Latest Assembly: Rnor_6.0 Ensembl - RGSC Genome Assembly v6.0 Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl1779,829,305 - 79,829,511 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system renal system reproductive system respiratory system appendage
High
Medium
Low 1 1 1 1 4 2 1
Below cutoff 3 6 2 4 2 2 2 1 1 2 2

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000085909   ⟹   ENSRNOP00000074173
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1779,829,305 - 79,829,511 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000060417 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000074173 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000085909 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.820 UniProtKB/TrEMBL
InterPro Prot_translocase_SecE_dom_sf UniProtKB/TrEMBL
  Translocase_Sec61-g UniProtKB/TrEMBL
  Translocase_SecE/Sec61-g UniProtKB/TrEMBL
Pfam SecE UniProtKB/TrEMBL
PhenoGen AABR07028668.1 PhenoGen
Superfamily-SCOP SSF103456 UniProtKB/TrEMBL
TIGRFAMs secE_euk_arch UniProtKB/TrEMBL
UniProt A0A0G2K7E7_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07028668.1        Symbol and Name status set to provisional 45752 PROVISIONAL