AABR07030926.1 (null) - Rat Genome Database

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Gene: AABR07030926.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07030926.1
Name:
RGD ID: 15010733
Description: Predicted to enable double-stranded DNA binding activity. Predicted to be involved in DNA repair and kinetochore assembly.
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl10109,891,383 - 109,891,879 (-)EnsemblRnor6.0rn6Rnor6.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 35 41 33 19 33 3 73 29 37 11
Low 8 16 8 8 8 8 1 6 4 8
Below cutoff

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000077930   ⟹   ENSRNOP00000075044
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl10109,891,383 - 109,891,879 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000057080 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000075044 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077930 UniProtKB/TrEMBL
InterPro CENP-X UniProtKB/TrEMBL
PANTHER PTHR28680 UniProtKB/TrEMBL
Pfam CENP-X UniProtKB/TrEMBL
PhenoGen AABR07030926.1 PhenoGen
UniProt A0A0G2K9L7_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07030926.1        Symbol and Name status set to provisional 45752 PROVISIONAL