AABR07002683.1 (null) - Rat Genome Database

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Gene: AABR07002683.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07002683.1
Name:
RGD ID: 15008806
Description:
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl179,715,896 - 79,723,832 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl180,982,358 - 80,984,217 (+)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 10 8 4 8 10 12 1 10 11 8
Low 2 33 49 41 15 41 1 62 34 31
Below cutoff

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000078462   ⟹   ENSRNOP00000070585
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl179,715,896 - 79,723,832 (+)Ensembl
Rnor_6.0 Ensembl180,982,358 - 80,984,217 (+)Ensembl
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JYB0-F1-model_v2 AlphaFold A0A0G2JYB0 1-216 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000054609 Ensembl
PhenoGen AABR07002683.1 PhenoGen
RatGTEx ENSRNOG00000054609 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07002683.1        Symbol and Name status set to provisional 45752 PROVISIONAL