AABR07072639.2 (null) - Rat Genome Database

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Gene: AABR07072639.2 (null) Rattus norvegicus
Analyze
Symbol: AABR07072639.2
Name:
RGD ID: 15008563
Description: Predicted to be integral component of membrane.
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl1932,942,127 - 32,943,222 (-)Ensembl
Rnor_6.0 Ensembl1937,020,852 - 37,021,958 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 11 1 19 4
Low 3 42 40 24 16 24 8 11 63 34 22 7 8
Below cutoff 1 17 17 17

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000084366   ⟹   ENSRNOP00000069300
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1932,942,127 - 32,943,222 (-)Ensembl
Rnor_6.0 Ensembl1937,020,852 - 37,021,958 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000054284 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000069300 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000084366 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PhenoGen AABR07072639.2 PhenoGen
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt A0A0G2JV03_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07072639.2        Symbol and Name status set to provisional 45752 PROVISIONAL