AABR07062298.1 (null) - Rat Genome Database

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Gene: AABR07062298.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07062298.1
Name:
RGD ID: 15006847
Description: Predicted to enable carboxylic ester hydrolase activity. Predicted to be involved in formaldehyde catabolic process.
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl4166,688,924 - 166,693,523 (+)Ensembl
Rnor_6.0 Ensembl4167,564,259 - 167,568,807 (+)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IBA)

Molecular Function

References

References - curated
1. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system exocrine system hepatobiliary system integumental system musculoskeletal system renal system respiratory system appendage
High
Medium
Low 2
Below cutoff 1 1 1 1 1 15 1 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000089061   ⟹   ENSRNOP00000070643
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4166,688,924 - 166,693,523 (+)Ensembl
Rnor_6.0 Ensembl4167,564,259 - 167,568,807 (+)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000052024 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000070643 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000089061 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/TrEMBL
  Esterase_put UniProtKB/TrEMBL
  S-formylglutathione_hydrol UniProtKB/TrEMBL
PANTHER PTHR10061 UniProtKB/TrEMBL
Pfam Esterase UniProtKB/TrEMBL
PhenoGen AABR07062298.1 PhenoGen
Superfamily-SCOP SSF53474 UniProtKB/TrEMBL
UniProt A0A0G2JYG2_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07062298.1        Symbol and Name status set to provisional 45752 PROVISIONAL