AABR07062539.1 (null) - Rat Genome Database

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Gene: AABR07062539.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07062539.1
Name:
RGD ID: 15006578
Description: Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in DNA-templated transcription. Predicted to be located in extracellular space.
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl4180,151,571 - 180,152,387 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl4181,628,276 - 181,629,074 (+)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system renal system reproductive system
High
Medium
Low 1 1
Below cutoff 3 2 6 1 6

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000077332   ⟹   ENSRNOP00000073192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4180,151,571 - 180,152,387 (+)Ensembl
Rnor_6.0 Ensembl4181,628,276 - 181,629,074 (+)Ensembl
Protein Sequences
Ensembl Protein ENSRNOP00000073192.2
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000073192   ⟸   ENSRNOT00000077332
Protein Domains
Albumin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K4V8-F1-model_v2 AlphaFold A0A0G2K4V8 1-117 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000051667 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077332.2 UniProtKB/TrEMBL
Gene3D-CATH 2.20.25.10 UniProtKB/TrEMBL
InterPro Serum_albumin_N UniProtKB/TrEMBL
  Znf_TFIIS UniProtKB/TrEMBL
Pfam TFIIS_C UniProtKB/TrEMBL
PhenoGen AABR07062539.1 PhenoGen
PROSITE ALBUMIN_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000051667 RatGTEx
SMART ZnF_C2C2 UniProtKB/TrEMBL
Superfamily-SCOP Zinc beta-ribbon UniProtKB/TrEMBL
UniProt A0A0G2K4V8_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07062539.1        Symbol and Name status set to provisional 45752 PROVISIONAL