AABR07038703.1 (null) - Rat Genome Database

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Gene: AABR07038703.1 (null) Rattus norvegicus
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Symbol: AABR07038703.1
Name:
RGD ID: 15006246
Description: Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in Golgi membrane and endoplasmic reticulum membrane.
Type: processed_pseudogene
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 EnsemblX54,564,018 - 54,565,271 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 EnsemblX58,823,778 - 58,824,632 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system exocrine system hemolymphoid system hepatobiliary system nervous system renal system reproductive system respiratory system
High
Medium
Low
Below cutoff 20 12 14 12 3 3 16 18

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSRNOT00000076011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX54,564,018 - 54,565,271 (-)Ensembl
Rnor_6.0 EnsemblX58,823,778 - 58,824,632 (-)Ensembl
Protein Sequences
Ensembl Protein ENSRNOP00000096154.1

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000051223 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000076011.2 UniProtKB/TrEMBL
InterPro Frag1/DRAM/Sfk1 UniProtKB/TrEMBL
  PGAP2 UniProtKB/TrEMBL
PANTHER POST-GPI ATTACHMENT TO PROTEINS FACTOR 2 UniProtKB/TrEMBL
  PTHR12892 UniProtKB/TrEMBL
Pfam Frag1 UniProtKB/TrEMBL
PhenoGen AABR07038703.1 PhenoGen
RatGTEx ENSRNOG00000051223 RatGTEx
UniProt A0A8I6ARY0_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07038703.1        Symbol and Name status set to provisional 45752 PROVISIONAL