AABR07048012.1 (null) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: AABR07048012.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07048012.1
Name:
RGD ID: 15005650
Description: ENCODES a protein that exhibits protein-transporting ATPase activity (inferred); FOUND IN integral component of membrane (inferred)
Type: protein-coding
Latest Assembly: Rnor_6.0 Ensembl - RGSC Genome Assembly v6.0 Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl556,751,657 - 56,753,832 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000073045   ⟹   ENSRNOP00000066017
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl556,751,657 - 56,753,832 (-)Ensembl
Protein Sequences
Reference Sequences
RefSeq Acc Id: ENSRNOP00000066017   ⟸   ENSRNOT00000073045
Protein Domains
TCP

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000049016 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000049451 UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000064095 UniProtKB/TrEMBL
  ENSRNOP00000066017 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000072285 UniProtKB/TrEMBL
  ENSRNOT00000073045 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.820 UniProtKB/TrEMBL
InterPro Prot_translocase_SecE_dom_sf UniProtKB/TrEMBL
  TF_TCP_subgr UniProtKB/TrEMBL
  Translocase_Sec61-g UniProtKB/TrEMBL
  Translocase_SecE/Sec61-g UniProtKB/TrEMBL
Pfam SecE UniProtKB/TrEMBL
  TCP UniProtKB/TrEMBL
PhenoGen AABR07048012.1 PhenoGen
Superfamily-SCOP SSF103456 UniProtKB/TrEMBL
TIGRFAMs secE_euk_arch UniProtKB/TrEMBL
UniProt Q7TQ10_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07048012.1        Symbol and Name status set to provisional 45752 PROVISIONAL