AABR07067422.1 (null) - Rat Genome Database

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Gene: AABR07067422.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07067422.1
Name:
RGD ID: 15005555
Description: Predicted to be involved in cell wall macromolecule catabolic process and peptidoglycan catabolic process.
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl944,576,918 - 44,586,358 (-)EnsemblRnor6.0rn6Rnor6.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:84
Count of miRNA genes:71
Interacting mature miRNAs:74
Transcripts:ENSRNOT00000071722
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000071722   ⟹   ENSRNOP00000064087
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl944,576,918 - 44,586,358 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000048571 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000064087 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000071722 UniProtKB/TrEMBL
InterPro Glyco_hydro_23 UniProtKB/TrEMBL
  Lysozyme-like_dom_sf UniProtKB/TrEMBL
PhenoGen AABR07067422.1 PhenoGen
PIRSF Lysozyme_g UniProtKB/TrEMBL
PRINTS LYSOZYMEG UniProtKB/TrEMBL
Superfamily-SCOP SSF53955 UniProtKB/TrEMBL
UniProt M0R412_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07067422.1        Symbol and Name status set to provisional 45752 PROVISIONAL